RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeastyeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA1YAL005C RPA34P47006 233 aaPredicted RBP11.18□□□□□ -0.62
SSA1YAL005C RPL21AQ02753 160 aaKnown RBP11.18□□□□□ -0.62
SSA1YAL005C ASM4Q05166 528 aa11.18□□□□□ -0.62
SSA1YAL005C RPL21BQ12672 160 aaKnown RBP11.18□□□□□ -0.62
SSA1YAL005C TCA17P32613 152 aa11.17□□□□□ -0.62
SSA1YAL005C CAF16P43569 289 aa11.17□□□□□ -0.62
SSA1YAL005C SMM1P53720 384 aaKnown RBP11.17□□□□□ -0.62
SSA1YAL005C INN1P53901 409 aa11.17□□□□□ -0.62
SSA1YAL005C YDL086WQ07505 273 aa11.17□□□□□ -0.62
SSA1YAL005C HUG1Q6Q5K6 68 aa11.17□□□□□ -0.62
SSA1YAL005C TPI1P00942 248 aaKnown RBP11.17□□□□□ -0.62
SSA1YAL005C CKS1P20486 150 aaKnown RBP11.17□□□□□ -0.62
SSA1YAL005C NOC4Q06512 552 aaPredicted RBP11.17□□□□□ -0.62
SSA1YAL005C URA2P07259 2214 aaKnown RBP11.17□□□□□ -0.62
SSA1YAL005C AME1P38313 324 aa11.16□□□□□ -0.62
SSA1YAL005C YFL015CP43578 164 aa11.16□□□□□ -0.62
SSA1YAL005C YJR111CP47148 283 aaKnown RBP11.16□□□□□ -0.62
SSA1YAL005C CWC25P53854 179 aaKnown RBP11.16□□□□□ -0.62
SSA1YAL005C YDR415CQ04033 374 aaPredicted RBP11.16□□□□□ -0.62
SSA1YAL005C YOR292CQ08743 309 aa11.16□□□□□ -0.62
SSA1YAL005C BBP1Q12365 385 aa11.16□□□□□ -0.62
SSA1YAL005C SPO24Q3E752 67 aa11.16□□□□□ -0.62
SSA1YAL005C YHL044WP38727 235 aa11.15□□□□□ -0.62
SSA1YAL005C YDL009CQ12210 107 aa11.15□□□□□ -0.62
SSA1YAL005C RDL1Q12305 139 aaKnown RBP11.15□□□□□ -0.62
SSA1YAL005C TFB5Q3E7C1 72 aaPredicted RBP11.15□□□□□ -0.62
SSA1YAL005C QCR2P07257 368 aa11.15□□□□□ -0.62
SSA1YAL005C FRS1P15624 595 aaKnown RBP11.15□□□□□ -0.62
SSA1YAL005C YKL070WP36087 169 aa11.15□□□□□ -0.62
SSA1YAL005C ISN1Q99312 450 aa11.15□□□□□ -0.62
SSA1YAL005C ACB1P31787 87 aa11.14□□□□□ -0.63
SSA1YAL005C LAG1P38703 411 aa11.14□□□□□ -0.63
SSA1YAL005C GZF3P42944 551 aaKnown RBP11.14□□□□□ -0.63
SSA1YAL005C PNC1P53184 216 aaKnown RBP11.14□□□□□ -0.63
SSA1YAL005C RUB1Q03919 77 aa11.14□□□□□ -0.63
SSA1YAL005C DGK1Q12382 290 aa11.14□□□□□ -0.63
SSA1YAL005C ATP10P18496 279 aa11.13□□□□□ -0.63
SSA1YAL005C ERG2P32352 222 aa11.13□□□□□ -0.63
SSA1YAL005C REC104P33323 182 aa11.13□□□□□ -0.63
SSA1YAL005C TTI2P47168 421 aa11.13□□□□□ -0.63
SSA1YAL005C GEP5Q12393 293 aa11.13□□□□□ -0.63
SSA1YAL005C TFC7Q12415 435 aa11.13□□□□□ -0.63
SSA1YAL005C PRM4Q12498 284 aa11.13□□□□□ -0.63
SSA1YAL005C SIP1P32578 815 aa11.13□□□□□ -0.63
SSA1YAL005C ELF1P36053 145 aa11.13□□□□□ -0.63
SSA1YAL005C GPI18P38211 433 aa11.13□□□□□ -0.63
SSA1YAL005C CUE1P38428 203 aa11.13□□□□□ -0.63
SSA1YAL005C PSD1P39006 500 aa11.13□□□□□ -0.63
SSA1YAL005C GDH1P07262 454 aaKnown RBP11.12□□□□□ -0.63
SSA1YAL005C IRC25Q07951 179 aa11.12□□□□□ -0.63
SSA1YAL005C CSI2Q08054 341 aa11.12□□□□□ -0.63
SSA1YAL005C PCL2P25693 308 aa11.11□□□□□ -0.63
SSA1YAL005C IES6P32617 166 aa11.11□□□□□ -0.63
SSA1YAL005C YPC1P38298 316 aa11.11□□□□□ -0.63
SSA1YAL005C YHC3P47040 408 aa11.11□□□□□ -0.63
SSA1YAL005C YCL042WP25572 119 aa11.11□□□□□ -0.63
SSA1YAL005C MRP20P32387 263 aa11.11□□□□□ -0.63
SSA1YAL005C ISC10P32645 267 aa11.11□□□□□ -0.63
SSA1YAL005C YIR035CP40579 254 aa11.11□□□□□ -0.63
SSA1YAL005C PUS4P48567 403 aaKnown RBP11.11□□□□□ -0.63
SSA1YAL005C RPP2AP05319 106 aaKnown RBP11.1□□□□□ -0.63
SSA1YAL005C TIP1P27654 210 aaPredicted RBP11.1□□□□□ -0.63
SSA1YAL005C GAR1P28007 205 aaKnown RBP11.1□□□□□ -0.63
SSA1YAL005C GLY1P37303 387 aaKnown RBP11.1□□□□□ -0.63
SSA1YAL005C IKI1P38874 309 aa11.1□□□□□ -0.63
SSA1YAL005C WSC2P53832 503 aa11.1□□□□□ -0.63
SSA1YAL005C YLR224WQ05947 369 aa11.1□□□□□ -0.63
SSA1YAL005C YCT1Q12235 531 aa11.1□□□□□ -0.63
SSA1YAL005C HXT14P42833 540 aa11.09□□□□□ -0.63
SSA1YAL005C VPS28Q02767 242 aa11.09□□□□□ -0.63
SSA1YAL005C YFH1Q07540 174 aa11.09□□□□□ -0.63
SSA1YAL005C STF2P16965 84 aa11.09□□□□□ -0.63
SSA1YAL005C AIM24P47127 394 aa11.09□□□□□ -0.63
SSA1YAL005C SUT1P53032 299 aaKnown RBP11.09□□□□□ -0.63
SSA1YAL005C VPS63O13549 108 aa11.08□□□□□ -0.64
SSA1YAL005C YCR061WP25639 631 aa11.08□□□□□ -0.64
SSA1YAL005C SOR1P35497 357 aaKnown RBP11.08□□□□□ -0.64
SSA1YAL005C HED1Q03937 162 aa11.08□□□□□ -0.64
SSA1YAL005C SOR2Q07786 357 aa11.08□□□□□ -0.64
SSA1YAL005C YGL194C-AQ2V2P6 80 aa11.08□□□□□ -0.64
SSA1YAL005C MRS4P23500 304 aa11.07□□□□□ -0.64
SSA1YAL005C LSM4P40070 187 aaKnown RBP11.07□□□□□ -0.64
SSA1YAL005C PKP2P53170 491 aa11.07□□□□□ -0.64
SSA1YAL005C SNU23Q12368 194 aaPredicted RBP11.07□□□□□ -0.64
SSA1YAL005C YJR112W-AQ3E743 109 aa11.07□□□□□ -0.64
SSA1YAL005C VMA11P32842 164 aa11.07□□□□□ -0.64
SSA1YAL005C APJ1P53940 528 aa11.07□□□□□ -0.64
SSA1YAL005C SEC22P22214 214 aa11.06□□□□□ -0.64
SSA1YAL005C LSB5P25369 354 aa11.06□□□□□ -0.64
SSA1YAL005C ERV1P27882 189 aa11.06□□□□□ -0.64
SSA1YAL005C COQ2P32378 372 aa11.06□□□□□ -0.64
SSA1YAL005C RRT7Q07829 113 aa11.06□□□□□ -0.64
SSA1YAL005C CSM4Q08955 156 aa11.06□□□□□ -0.64
SSA1YAL005C ROX3P25046 220 aa11.05□□□□□ -0.64
SSA1YAL005C YGL114WP53134 725 aa11.05□□□□□ -0.64
SSA1YAL005C MHR1Q06630 226 aa11.05□□□□□ -0.64
SSA1YAL005C BOL1Q3E793 110 aa11.05□□□□□ -0.64
SSA1YAL005C YOS1Q3E834 85 aa11.05□□□□□ -0.64
SSA1YAL005C ERV15P38312 142 aa11.05□□□□□ -0.64
SSA1YAL005C GEP4P38812 185 aa11.05□□□□□ -0.64
Retrieved 100 of 5,963 RNA–protein pairs in 58.4 ms