RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 CDY2AQ9Y6F7 541 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 PDCD11Q14690 1871 aaKnown RBP12.36□□□□□ -0.43
SCAF11-201ENST00000266589 RECQL4O94761 1208 aa12.35□□□□□ -0.43
SCAF11-201ENST00000266589 CYP1A1P04798 512 aaPredicted RBP12.35□□□□□ -0.43
SCAF11-201ENST00000266589 CFHP08603 1231 aa12.35□□□□□ -0.43
SCAF11-201ENST00000266589 ZSCAN20P17040 1043 aaPredicted RBP12.35□□□□□ -0.43
SCAF11-201ENST00000266589 SSTR3P32745 418 aaPredicted RBP12.35□□□□□ -0.43
SCAF11-201ENST00000266589 HADHBP55084 474 aaKnown RBP12.35□□□□□ -0.43
SCAF11-201ENST00000266589 TCEAL1Q15170 157 aa12.35□□□□□ -0.43
SCAF11-201ENST00000266589 MAP3K21Q5TCX8 1036 aa12.35□□□□□ -0.43
SCAF11-201ENST00000266589 CCDC181Q5TID7 509 aa12.35□□□□□ -0.43
SCAF11-201ENST00000266589 NAA35Q5VZE5 725 aa12.35□□□□□ -0.43
SCAF11-201ENST00000266589 CCSAPQ6IQ19 270 aaPredicted RBP12.35□□□□□ -0.43
SCAF11-201ENST00000266589 RSPH3Q86UC2 560 aa12.35□□□□□ -0.43
SCAF11-201ENST00000266589 NT5DC3Q86UY8 548 aa12.35□□□□□ -0.43
SCAF11-201ENST00000266589 PASD1Q8IV76 773 aa12.35□□□□□ -0.43
SCAF11-201ENST00000266589 GPR161Q8N6U8 529 aaKnown RBP12.35□□□□□ -0.43
SCAF11-201ENST00000266589 NOA1Q8NC60 698 aaKnown RBP12.35□□□□□ -0.43
SCAF11-201ENST00000266589 CPA5Q8WXQ8 436 aa12.35□□□□□ -0.43
SCAF11-201ENST00000266589 WNT8BQ93098 351 aa12.35□□□□□ -0.43
SCAF11-201ENST00000266589 CYFIP2Q96F07 1278 aa12.35□□□□□ -0.43
SCAF11-201ENST00000266589 RPGRIP1Q96KN7 1286 aa12.35□□□□□ -0.43
SCAF11-201ENST00000266589 APOL6Q9BWW8 343 aa12.35□□□□□ -0.43
SCAF11-201ENST00000266589 BCO2Q9BYV7 579 aa12.35□□□□□ -0.43
SCAF11-201ENST00000266589 CHORDC1Q9UHD1 332 aaPredicted RBP12.35□□□□□ -0.43
SCAF11-201ENST00000266589 DDX20Q9UHI6 824 aaKnown RBP12.35□□□□□ -0.43
SCAF11-201ENST00000266589 GTF3C4Q9UKN8 822 aa12.35□□□□□ -0.43
SCAF11-201ENST00000266589 TRPV2Q9Y5S1 764 aa12.35□□□□□ -0.43
SCAF11-201ENST00000266589 CYP1A2P05177 515 aa12.34□□□□□ -0.43
SCAF11-201ENST00000266589 NSFP46459 744 aaKnown RBP12.34□□□□□ -0.43
SCAF11-201ENST00000266589 TUBB4BP68371 445 aa12.34□□□□□ -0.43
SCAF11-201ENST00000266589 RBP5P82980 135 aa12.34□□□□□ -0.43
SCAF11-201ENST00000266589 CENPCQ03188 943 aa12.34□□□□□ -0.43
SCAF11-201ENST00000266589 UBXN11Q5T124 520 aa12.34□□□□□ -0.43
SCAF11-201ENST00000266589 TRIM72Q6ZMU5 477 aa12.34□□□□□ -0.43
SCAF11-201ENST00000266589 SERINC5Q86VE9 423 aa12.34□□□□□ -0.43
SCAF11-201ENST00000266589 FAM228AQ86W67 206 aa12.34□□□□□ -0.43
SCAF11-201ENST00000266589 PCSK9Q8NBP7 692 aaKnown RBP12.34□□□□□ -0.43
SCAF11-201ENST00000266589 ZNF784Q8NCA9 323 aaPredicted RBP12.34□□□□□ -0.43
SCAF11-201ENST00000266589 ZNF606Q8WXB4 792 aa12.34□□□□□ -0.43
SCAF11-201ENST00000266589 HPDLQ96IR7 371 aa12.34□□□□□ -0.43
SCAF11-201ENST00000266589 FAXDC2Q96IV6 333 aa12.34□□□□□ -0.43
SCAF11-201ENST00000266589 CALR3Q96L12 384 aaKnown RBP12.34□□□□□ -0.43
SCAF11-201ENST00000266589 ZMAT2Q96NC0 199 aaKnown RBP12.34□□□□□ -0.43
SCAF11-201ENST00000266589 VRTNQ9H8Y1 702 aa12.34□□□□□ -0.43
SCAF11-201ENST00000266589 EHD2Q9NZN4 543 aa12.34□□□□□ -0.43
SCAF11-201ENST00000266589 STXBP5LQ9Y2K9 1186 aa12.34□□□□□ -0.43
SCAF11-201ENST00000266589 DERAQ9Y315 318 aa12.34□□□□□ -0.43
SCAF11-201ENST00000266589 NOC2LQ9Y3T9 749 aaKnown RBP12.34□□□□□ -0.43
SCAF11-201ENST00000266589 CTSHP09668 335 aa12.34□□□□□ -0.43
SCAF11-201ENST00000266589 AKAP5P24588 427 aa12.34□□□□□ -0.43
SCAF11-201ENST00000266589 BRD2P25440 801 aaKnown RBP12.34□□□□□ -0.43
SCAF11-201ENST00000266589 PAFAH1B1P43034 410 aa12.34□□□□□ -0.43
SCAF11-201ENST00000266589 HTRA3P83110 453 aa12.34□□□□□ -0.43
SCAF11-201ENST00000266589 FBXO38Q6PIJ6 1188 aa12.34□□□□□ -0.43
SCAF11-201ENST00000266589 SESTD1Q86VW0 696 aa12.34□□□□□ -0.43
SCAF11-201ENST00000266589 MS4A14Q96JA4 679 aa12.34□□□□□ -0.43
SCAF11-201ENST00000266589 NUP85Q9BW27 656 aa12.34□□□□□ -0.43
SCAF11-201ENST00000266589 SDCBP2Q9H190 292 aa12.34□□□□□ -0.43
SCAF11-201ENST00000266589 SMYD3Q9H7B4 428 aa12.34□□□□□ -0.43
SCAF11-201ENST00000266589 ABCB6Q9NP58 842 aa12.34□□□□□ -0.43
SCAF11-201ENST00000266589 SMARCAL1Q9NZC9 954 aa12.34□□□□□ -0.43
SCAF11-201ENST00000266589 CNTN3Q9P232 1028 aa12.34□□□□□ -0.43
SCAF11-201ENST00000266589 CNOT8Q9UFF9 292 aaKnown RBP12.34□□□□□ -0.43
SCAF11-201ENST00000266589 AMFRQ9UKV5 643 aa12.34□□□□□ -0.43
SCAF11-201ENST00000266589 GRIN2DO15399 1336 aa12.33□□□□□ -0.43
SCAF11-201ENST00000266589 KCNK3O14649 394 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 MTA2O94776 668 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 GNRH1P01148 92 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 P4HA1P13674 534 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 CDH8P55286 799 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 NOMO3P69849 1222 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 C2orf54Q08AI8 447 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 GLRA4Q5JXX5 417 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 TWF2Q6IBS0 349 aaKnown RBP12.33□□□□□ -0.44
SCAF11-201ENST00000266589 C11orf63Q6NUN7 778 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 ALKAL1Q6UXT8 129 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 ZNF572Q7Z3I7 529 aaPredicted RBP12.33□□□□□ -0.44
SCAF11-201ENST00000266589 RNF180Q86T96 592 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 MCOLN2Q8IZK6 566 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 ZNF564Q8TBZ8 553 aaPredicted RBP12.33□□□□□ -0.44
SCAF11-201ENST00000266589 PXYLP1Q8TE99 480 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 TRIM11Q96F44 468 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 UVRAGQ9P2Y5 699 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 TUBGCP4Q9UGJ1 667 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 RPLP2P05387 115 aaKnown RBP12.33□□□□□ -0.44
SCAF11-201ENST00000266589 RHOXF2BP0C7M4 288 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 TNNC1P63316 161 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 PTGISQ16647 500 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 CFAP221Q4G0U5 840 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 SMYD5Q6GMV2 418 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 MON1BQ7L1V2 547 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 PDCL2Q8N4E4 241 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 BEST2Q8NFU1 509 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 C18orf25Q96B23 403 aaPredicted RBP12.33□□□□□ -0.44
SCAF11-201ENST00000266589 HES6Q96HZ4 224 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 RHOXF2Q9BQY4 288 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 ZSWIM1Q9BR11 485 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 SENP6Q9GZR1 1112 aaPredicted RBP12.33□□□□□ -0.44
SCAF11-201ENST00000266589 RNF39Q9H2S5 420 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms