RNA–Protein interactions for RNA: snR13

snR13, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR13, Length 124 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR13	snR13	RPS6A	P0CX37	236 aa	Known RBP	4.66	□□□□□ -1.66
snR13	snR13	RPS6B	P0CX38	236 aa	Predicted RBP	4.66	□□□□□ -1.66
snR13	snR13	PHO87	P25360	923 aa		4.66	□□□□□ -1.66
snR13	snR13	NTH2	P35172	780 aa		4.66	□□□□□ -1.66
snR13	snR13	OSH7	P38755	437 aa		4.66	□□□□□ -1.66
snR13	snR13	ACO2	P39533	789 aa		4.66	□□□□□ -1.66
snR13	snR13	YIR007W	P40566	764 aa		4.66	□□□□□ -1.66
snR13	snR13	ALA1	P40825	983 aa	Known RBP	4.66	□□□□□ -1.66
snR13	snR13	MSN5	P52918	1224 aa		4.66	□□□□□ -1.66
snR13	snR13	CDC19	P00549	500 aa	Known RBP	4.65	□□□□□ -1.67
snR13	snR13	DAL1	P32375	460 aa		4.65	□□□□□ -1.67
snR13	snR13	TGL4	P36165	910 aa		4.65	□□□□□ -1.67
snR13	snR13	SSN3	P39073	555 aa		4.65	□□□□□ -1.67
snR13	snR13	ROG3	P43602	733 aa		4.65	□□□□□ -1.67
snR13	snR13	ACS2	P52910	683 aa	Known RBP	4.65	□□□□□ -1.67
snR13	snR13	GAL2	P13181	574 aa		4.64	□□□□□ -1.67
snR13	snR13	HAP4	P14064	554 aa		4.64	□□□□□ -1.67
snR13	snR13	JJJ2	P46997	583 aa		4.64	□□□□□ -1.67
snR13	snR13	TY1A-DR3	Q12441	440 aa		4.64	□□□□□ -1.67
snR13	snR13	CYT1	P07143	309 aa		4.63	□□□□□ -1.67
snR13	snR13	SSA4	P22202	642 aa	Known RBP	4.63	□□□□□ -1.67
snR13	snR13	ECM23	Q02710	187 aa		4.63	□□□□□ -1.67
snR13	snR13	TY1A-MR1	Q04215	440 aa		4.63	□□□□□ -1.67
snR13	snR13	GAS4	Q08271	471 aa		4.63	□□□□□ -1.67
snR13	snR13	RGA1	P39083	1007 aa		4.62	□□□□□ -1.67
snR13	snR13	UBP15	P50101	1230 aa		4.62	□□□□□ -1.67
snR13	snR13	MCM1	P11746	286 aa		4.61	□□□□□ -1.67
snR13	snR13	SLA1	P32790	1244 aa		4.61	□□□□□ -1.67
snR13	snR13	ROM1	P53046	1155 aa		4.61	□□□□□ -1.67
snR13	snR13	YPQ2	Q06328	317 aa		4.61	□□□□□ -1.67
snR13	snR13	PUP1	P25043	261 aa		4.6	□□□□□ -1.67
snR13	snR13	IRE1	P32361	1115 aa		4.6	□□□□□ -1.67
snR13	snR13	UBX7	P38349	436 aa		4.6	□□□□□ -1.67
snR13	snR13	NAM8	Q00539	523 aa	Known RBP	4.6	□□□□□ -1.67
snR13	snR13	CCP1	P00431	361 aa		4.59	□□□□□ -1.67
snR13	snR13	UBP1	P25037	809 aa		4.59	□□□□□ -1.67
snR13	snR13	SHM1	P37292	490 aa	Predicted RBP	4.59	□□□□□ -1.67
snR13	snR13	VAN1	P23642	535 aa		4.58	□□□□□ -1.68
snR13	snR13	YGR035C	P53222	116 aa		4.58	□□□□□ -1.68
snR13	snR13	CUZ1	P53899	274 aa		4.58	□□□□□ -1.68
snR13	snR13	YML083C	Q04526	418 aa		4.57	□□□□□ -1.68
snR13	snR13	HPF1	Q05164	967 aa		4.57	□□□□□ -1.68
snR13	snR13	TRS33	Q99394	268 aa		4.57	□□□□□ -1.68
snR13	snR13	PDC6	P26263	563 aa	Known RBP	4.56	□□□□□ -1.68
snR13	snR13	MLF3	P32047	452 aa		4.56	□□□□□ -1.68
snR13	snR13	NGR1	P32831	672 aa	Known RBP	4.56	□□□□□ -1.68
snR13	snR13	YTA6	P40328	754 aa		4.56	□□□□□ -1.68
snR13	snR13	YNL165W	P53891	406 aa		4.56	□□□□□ -1.68
snR13	snR13	NOB1	Q08444	459 aa	Known RBP	4.56	□□□□□ -1.68
snR13	snR13	PSH1	Q12161	406 aa		4.56	□□□□□ -1.68
snR13	snR13	DIT1	P21623	536 aa		4.55	□□□□□ -1.68
snR13	snR13	CWH41	P53008	833 aa		4.55	□□□□□ -1.68
snR13	snR13	YMR265C	Q03508	461 aa	Known RBP	4.55	□□□□□ -1.68
snR13	snR13	Q0182	Q9ZZW1	134 aa		4.55	□□□□□ -1.68
snR13	snR13	RPS31	P05759	152 aa	Known RBP	4.54	□□□□□ -1.68
snR13	snR13	SCD5	P34758	872 aa		4.54	□□□□□ -1.68
snR13	snR13	CEM1	P39525	442 aa		4.54	□□□□□ -1.68
snR13	snR13	SUB2	Q07478	446 aa	Known RBP	4.54	□□□□□ -1.68
snR13	snR13	STB3	Q12427	513 aa		4.54	□□□□□ -1.68
snR13	snR13	LYS5	P50113	272 aa		4.53	□□□□□ -1.68
snR13	snR13	FOX2	Q02207	900 aa	Known RBP	4.53	□□□□□ -1.68
snR13	snR13	PUF6	Q04373	656 aa	Known RBP	4.53	□□□□□ -1.68
snR13	snR13	SUV3	P32580	737 aa		4.52	□□□□□ -1.69
snR13	snR13	MRPL16	P38064	232 aa		4.52	□□□□□ -1.69
snR13	snR13	HXT5	P38695	592 aa		4.52	□□□□□ -1.69
snR13	snR13	KRE33	P53914	1056 aa	Known RBP	4.52	□□□□□ -1.69
snR13	snR13	UTP4	Q06679	776 aa	Known RBP	4.52	□□□□□ -1.69
snR13	snR13	PUN1	Q06991	263 aa		4.52	□□□□□ -1.69
snR13	snR13	DPH6	Q12429	685 aa		4.52	□□□□□ -1.69
snR13	snR13	LEU1	P07264	779 aa	Known RBP	4.51	□□□□□ -1.69
snR13	snR13	ALD4	P46367	519 aa	Known RBP	4.51	□□□□□ -1.69
snR13	snR13	JJJ3	P47138	172 aa		4.51	□□□□□ -1.69
snR13	snR13	ALD2	P47771	506 aa		4.51	□□□□□ -1.69
snR13	snR13	MTO1	P53070	669 aa		4.51	□□□□□ -1.69
snR13	snR13	ADE12	P80210	433 aa	Known RBP	4.51	□□□□□ -1.69
snR13	snR13	FPS1	P23900	669 aa		4.5	□□□□□ -1.69
snR13	snR13	TRK2	P28584	889 aa		4.5	□□□□□ -1.69
snR13	snR13	CAB1	Q04430	367 aa		4.5	□□□□□ -1.69
snR13	snR13	TAF7	Q05021	590 aa		4.5	□□□□□ -1.69
snR13	snR13	SYT1	Q06836	1226 aa		4.5	□□□□□ -1.69
snR13	snR13	YDR461C-A	Q2V2P7	80 aa		4.5	□□□□□ -1.69
snR13	snR13	RPP1A	P05318	106 aa	Predicted RBP	4.49	□□□□□ -1.69
snR13	snR13	RGP1	P16664	663 aa		4.49	□□□□□ -1.69
snR13	snR13	SSA1	P10591	642 aa	Known RBP	4.48	□□□□□ -1.69
snR13	snR13	SRS2	P12954	1174 aa		4.48	□□□□□ -1.69
snR13	snR13	SPR3	P41901	512 aa		4.48	□□□□□ -1.69
snR13	snR13	RPL34A	P87262	121 aa	Predicted RBP	4.48	□□□□□ -1.69
snR13	snR13	ISC10	P32645	267 aa		4.47	□□□□□ -1.69
snR13	snR13	YBR197C	P38306	217 aa		4.47	□□□□□ -1.69
snR13	snR13	TPS3	P38426	1054 aa	Known RBP	4.47	□□□□□ -1.69
snR13	snR13	QDR2	P40474	542 aa		4.47	□□□□□ -1.69
snR13	snR13	CWC15	Q03772	175 aa	Known RBP	4.47	□□□□□ -1.69
snR13	snR13	MRPL33	P20084	86 aa		4.46	□□□□□ -1.7
snR13	snR13	KAP122	P32767	1081 aa		4.46	□□□□□ -1.7
snR13	snR13	PNP1	Q05788	311 aa		4.46	□□□□□ -1.7
snR13	snR13	VMA3	P25515	160 aa		4.45	□□□□□ -1.7
snR13	snR13	CUS1	Q02554	436 aa	Predicted RBP	4.45	□□□□□ -1.7
snR13	snR13	RPC31	P17890	251 aa		4.44	□□□□□ -1.7
snR13	snR13	RRN6	P32786	894 aa		4.44	□□□□□ -1.7
snR13	snR13	NCL1	P38205	684 aa	Known RBP	4.44	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms