RNA–Protein interactions for RNA: YPR002W

PDH1, Transcript of Putative 2-methylcitrate dehydratase, yeastyeast

Gene PDH1, Length 1,551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDH1YPR002W FPK1P53739 893 aa6.78□□□□□ -1.32
PDH1YPR002W YRF1-4O13559 1382 aa6.78□□□□□ -1.32
PDH1YPR002W YIL092WP40497 633 aa6.78□□□□□ -1.32
PDH1YPR002W EAF7P53911 425 aaKnown RBP6.78□□□□□ -1.32
PDH1YPR002W CAB1Q04430 367 aa6.78□□□□□ -1.32
PDH1YPR002W SIR4P11978 1358 aa6.77□□□□□ -1.33
PDH1YPR002W PSK1P31374 1356 aa6.77□□□□□ -1.33
PDH1YPR002W GLN1P32288 370 aaKnown RBP6.77□□□□□ -1.33
PDH1YPR002W CAB3P36076 571 aa6.77□□□□□ -1.33
PDH1YPR002W HST2P53686 357 aa6.77□□□□□ -1.33
PDH1YPR002W HEF3P53978 1044 aaKnown RBP6.77□□□□□ -1.33
PDH1YPR002W TFB3Q03290 321 aa6.77□□□□□ -1.33
PDH1YPR002W KTR1P27810 393 aaKnown RBP6.76□□□□□ -1.33
PDH1YPR002W RTR1P40084 226 aaPredicted RBP6.76□□□□□ -1.33
PDH1YPR002W THI22Q06490 572 aa6.76□□□□□ -1.33
PDH1YPR002W TYW1Q08960 810 aaKnown RBP6.76□□□□□ -1.33
PDH1YPR002W AUS1Q08409 1394 aa6.76□□□□□ -1.33
PDH1YPR002W APC1P53886 1748 aa6.76□□□□□ -1.33
PDH1YPR002W PDR1P12383 1068 aa6.75□□□□□ -1.33
PDH1YPR002W SIT4P20604 311 aa6.75□□□□□ -1.33
PDH1YPR002W PRD1P25375 712 aa6.75□□□□□ -1.33
PDH1YPR002W TAP42Q04372 366 aa6.75□□□□□ -1.33
PDH1YPR002W URN1Q06525 465 aaKnown RBP6.75□□□□□ -1.33
PDH1YPR002W RAD2P07276 1031 aa6.74□□□□□ -1.33
PDH1YPR002W ROX1P25042 368 aa6.74□□□□□ -1.33
PDH1YPR002W BCK2P33306 851 aa6.74□□□□□ -1.33
PDH1YPR002W EBP2P36049 427 aaKnown RBP6.74□□□□□ -1.33
PDH1YPR002W PTC2P39966 464 aaKnown RBP6.74□□□□□ -1.33
PDH1YPR002W MMP1Q12372 583 aa6.74□□□□□ -1.33
PDH1YPR002W PCT1P13259 424 aa6.74□□□□□ -1.33
PDH1YPR002W RAM1P22007 431 aa6.74□□□□□ -1.33
PDH1YPR002W VRP1P37370 817 aa6.74□□□□□ -1.33
PDH1YPR002W YPR015CQ12531 247 aa6.74□□□□□ -1.33
PDH1YPR002W TPD3P31383 635 aa6.73□□□□□ -1.33
PDH1YPR002W NUD1P32336 851 aa6.73□□□□□ -1.33
PDH1YPR002W BUD27P43573 796 aaKnown RBP RIP-Chip data6.73□□□□□ -1.33not detected
PDH1YPR002W POL32P47110 350 aa6.73□□□□□ -1.33
PDH1YPR002W NAP1P25293 417 aaKnown RBP6.72□□□□□ -1.33
PDH1YPR002W DAL5P15365 543 aa6.71□□□□□ -1.34
PDH1YPR002W KAR2P16474 682 aaKnown RBP6.71□□□□□ -1.34
PDH1YPR002W SCJ1P25303 377 aa6.71□□□□□ -1.34
PDH1YPR002W NPL4P33755 580 aa6.71□□□□□ -1.34
PDH1YPR002W RTF1P53064 558 aa6.71□□□□□ -1.34
PDH1YPR002W YML082WQ04533 649 aaKnown RBP6.71□□□□□ -1.34
PDH1YPR002W RLF2Q12495 606 aa6.71□□□□□ -1.34
PDH1YPR002W ESS1P22696 170 aa6.7□□□□□ -1.34
PDH1YPR002W PPH3P32345 308 aa6.7□□□□□ -1.34
PDH1YPR002W HIM1Q06674 414 aa6.7□□□□□ -1.34
PDH1YPR002W RTT109Q07794 436 aa6.7□□□□□ -1.34
PDH1YPR002W PKC1P24583 1151 aa6.69□□□□□ -1.34
PDH1YPR002W YNL115CP53925 644 aa6.69□□□□□ -1.34
PDH1YPR002W PKH3Q03306 898 aaPredicted RBP6.69□□□□□ -1.34
PDH1YPR002W YIL177CP40434 1758 aa6.69□□□□□ -1.34
PDH1YPR002W YJL225CP40889 1758 aa6.69□□□□□ -1.34
PDH1YPR002W PDI1P17967 522 aaKnown RBP6.69□□□□□ -1.34
PDH1YPR002W SLY41P22215 453 aa6.69□□□□□ -1.34
PDH1YPR002W RCM1P53972 490 aa6.69□□□□□ -1.34
PDH1YPR002W EDE1P34216 1381 aa6.68□□□□□ -1.34
PDH1YPR002W ITT1Q04638 464 aa6.68□□□□□ -1.34
PDH1YPR002W KEX2P13134 814 aa6.67□□□□□ -1.34
PDH1YPR002W CSE4P36012 229 aa6.67□□□□□ -1.34
PDH1YPR002W SLN1P39928 1220 aaPredicted RBP6.67□□□□□ -1.34
PDH1YPR002W YJU3P28321 313 aa6.66□□□□□ -1.34
PDH1YPR002W GRX4P32642 244 aa6.66□□□□□ -1.34
PDH1YPR002W DJP1P40564 432 aa6.66□□□□□ -1.34
PDH1YPR002W STR2P47164 639 aa6.66□□□□□ -1.34
PDH1YPR002W RAD59Q12223 238 aa6.66□□□□□ -1.34
PDH1YPR002W RPO41P13433 1351 aaKnown RBP6.66□□□□□ -1.34
PDH1YPR002W ISM1P48526 1002 aa6.65□□□□□ -1.34
PDH1YPR002W LSP1Q12230 341 aaKnown RBP6.65□□□□□ -1.34
PDH1YPR002W RRP5Q05022 1729 aaKnown RBP6.65□□□□□ -1.34
PDH1YPR002W TY4B-HP0C2J7 1802 aa6.65□□□□□ -1.34
PDH1YPR002W TY4B-JP47024 1803 aa6.65□□□□□ -1.34
PDH1YPR002W LEU2P04173 364 aaPredicted RBP6.65□□□□□ -1.35
PDH1YPR002W ARG8P18544 423 aa6.65□□□□□ -1.35
PDH1YPR002W MSP1P28737 362 aa6.65□□□□□ -1.35
PDH1YPR002W VPS24P36095 224 aaKnown RBP6.65□□□□□ -1.35
PDH1YPR002W YBL036CP38197 257 aa6.65□□□□□ -1.35
PDH1YPR002W PUF6Q04373 656 aaKnown RBP6.65□□□□□ -1.35
PDH1YPR002W CPS1P27614 576 aa6.64□□□□□ -1.35
PDH1YPR002W MTR4P47047 1073 aaKnown RBP6.64□□□□□ -1.35
PDH1YPR002W ERF2Q06551 359 aa6.64□□□□□ -1.35
PDH1YPR002W YRF1-2P40105 1681 aa6.64□□□□□ -1.35
PDH1YPR002W YJL007CP47080 104 aa6.63□□□□□ -1.35
PDH1YPR002W TCB2P48231 1178 aa6.63□□□□□ -1.35
PDH1YPR002W PAP2P53632 584 aaKnown RBP6.63□□□□□ -1.35
PDH1YPR002W LAM6Q08001 693 aa6.63□□□□□ -1.35
PDH1YPR002W ADE6P38972 1358 aaKnown RBP6.63□□□□□ -1.35
PDH1YPR002W DUR1,2P32528 1835 aaKnown RBP6.62□□□□□ -1.35
PDH1YPR002W KNS1P32350 737 aaPredicted RBP6.62□□□□□ -1.35
PDH1YPR002W GCD11P32481 527 aaKnown RBP6.62□□□□□ -1.35
PDH1YPR002W MRX12P47084 519 aa6.62□□□□□ -1.35
PDH1YPR002W XDJ1P39102 459 aa6.61□□□□□ -1.35
PDH1YPR002W BUD20Q08004 166 aaPredicted RBP6.61□□□□□ -1.35
PDH1YPR002W TRM1P15565 570 aaKnown RBP6.61□□□□□ -1.35
PDH1YPR002W BIM1P40013 344 aa6.61□□□□□ -1.35
PDH1YPR002W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35not detected
PDH1YPR002W PRP43P53131 767 aaKnown RBP6.61□□□□□ -1.35
PDH1YPR002W PUS6P53294 404 aa6.61□□□□□ -1.35
PDH1YPR002W RIA1P53893 1110 aa6.61□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 58.3 ms