RNA–Protein interactions for RNA: YPL137C

GIP3, Transcript of Cytoplasmic protein that regulates protein phosphatase 1 Glc7p, yeast

Gene GIP3, Length 3,831 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GIP3	YPL137C	RIM21	P48565	533 aa		2.73	□□□□□ -1.97
GIP3	YPL137C	NST1	P53935	1240 aa		2.73	□□□□□ -1.97
GIP3	YPL137C	SUB1	P54000	292 aa	Known RBP	2.73	□□□□□ -1.97
GIP3	YPL137C	SWE1	P32944	819 aa		2.73	□□□□□ -1.97
GIP3	YPL137C	RRP14	P36080	434 aa	Known RBP	2.73	□□□□□ -1.97
GIP3	YPL137C	ATG36	P46983	293 aa		2.73	□□□□□ -1.97
GIP3	YPL137C	RTF1	P53064	558 aa		2.73	□□□□□ -1.97
GIP3	YPL137C	RPL34A	P87262	121 aa	Predicted RBP	2.73	□□□□□ -1.97
GIP3	YPL137C	TYW1	Q08960	810 aa	Known RBP	2.73	□□□□□ -1.97
GIP3	YPL137C	SLM3	Q12093	417 aa		2.73	□□□□□ -1.97
GIP3	YPL137C	PUP1	P25043	261 aa		2.72	□□□□□ -1.97
GIP3	YPL137C	GUT1	P32190	709 aa		2.72	□□□□□ -1.97
GIP3	YPL137C	ERT1	P38140	529 aa		2.72	□□□□□ -1.97
GIP3	YPL137C	RSC30	P38781	883 aa		2.72	□□□□□ -1.97
GIP3	YPL137C	ATG1	P53104	897 aa		2.72	□□□□□ -1.97
GIP3	YPL137C	PRP5	P21372	849 aa	Predicted RBP	2.72	□□□□□ -1.97
GIP3	YPL137C	PKC1	P24583	1151 aa		2.72	□□□□□ -1.97
GIP3	YPL137C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	2.72	□□□□□ -1.97	not detected
GIP3	YPL137C	CWC15	Q03772	175 aa	Known RBP	2.72	□□□□□ -1.97
GIP3	YPL137C	TRL1	P09880	827 aa	Known RBP	2.72	□□□□□ -1.97
GIP3	YPL137C	RAD4	P14736	754 aa		2.72	□□□□□ -1.97
GIP3	YPL137C	BIO2	P32451	375 aa		2.72	□□□□□ -1.97
GIP3	YPL137C	YGR273C	P53329	174 aa		2.72	□□□□□ -1.97
GIP3	YPL137C	KTR1	P27810	393 aa	Known RBP	2.71	□□□□□ -1.98
GIP3	YPL137C	MNN4	P36044	1178 aa		2.71	□□□□□ -1.98
GIP3	YPL137C	ACF4	P47129	309 aa		2.71	□□□□□ -1.98
GIP3	YPL137C	TEA1	P47988	759 aa		2.71	□□□□□ -1.98
GIP3	YPL137C	UTP14	Q04500	899 aa	Known RBP	2.71	□□□□□ -1.98
GIP3	YPL137C	PAF1	P38351	445 aa		2.71	□□□□□ -1.98
GIP3	YPL137C	YML133C	Q03099	1374 aa		2.71	□□□□□ -1.98
GIP3	YPL137C	YLL067C	Q07888	1374 aa		2.71	□□□□□ -1.98
GIP3	YPL137C	STS1	P38637	319 aa		2.71	□□□□□ -1.98
GIP3	YPL137C	NUG1	P40010	520 aa	Known RBP	2.71	□□□□□ -1.98
GIP3	YPL137C	RRD1	P40454	393 aa	Known RBP	2.71	□□□□□ -1.98
GIP3	YPL137C	VPS72	Q03388	795 aa		2.71	□□□□□ -1.98
GIP3	YPL137C	LAM6	Q08001	693 aa		2.71	□□□□□ -1.98
GIP3	YPL137C	AI4	P03878	556 aa		2.7	□□□□□ -1.98
GIP3	YPL137C	RPN11	P43588	306 aa	Known RBP	2.7	□□□□□ -1.98
GIP3	YPL137C	ALD3	P54114	506 aa		2.7	□□□□□ -1.98
GIP3	YPL137C	RPN4	Q03465	531 aa		2.7	□□□□□ -1.98
GIP3	YPL137C	CSC1	Q06538	782 aa		2.7	□□□□□ -1.98
GIP3	YPL137C	STB3	Q12427	513 aa		2.7	□□□□□ -1.98
GIP3	YPL137C	CTT1	P06115	562 aa		2.7	□□□□□ -1.98
GIP3	YPL137C	RPL34B	P40525	121 aa	Known RBP	2.7	□□□□□ -1.98
GIP3	YPL137C	APL6	P46682	809 aa		2.7	□□□□□ -1.98
GIP3	YPL137C	TFB4	Q12004	338 aa		2.7	□□□□□ -1.98
GIP3	YPL137C	TCB1	Q12466	1186 aa		2.7	□□□□□ -1.98
GIP3	YPL137C	LYS2	P07702	1392 aa		2.7	□□□□□ -1.98
GIP3	YPL137C	RGR1	P19263	1082 aa		2.69	□□□□□ -1.98
GIP3	YPL137C	PRP40	P33203	583 aa	Known RBP	2.69	□□□□□ -1.98
GIP3	YPL137C	MNR2	P35724	969 aa		2.69	□□□□□ -1.98
GIP3	YPL137C	YBL036C	P38197	257 aa		2.69	□□□□□ -1.98
GIP3	YPL137C	YOL098C	Q12496	1037 aa		2.69	□□□□□ -1.98
GIP3	YPL137C	SRF1	Q12516	437 aa		2.69	□□□□□ -1.98
GIP3	YPL137C	TGL4	P36165	910 aa		2.69	□□□□□ -1.98
GIP3	YPL137C	MPH3	P0CE00	602 aa		2.68	□□□□□ -1.98
GIP3	YPL137C	SCT1	P32784	759 aa		2.68	□□□□□ -1.98
GIP3	YPL137C	KIC1	P38692	1080 aa		2.68	□□□□□ -1.98
GIP3	YPL137C	ETP1	P38748	585 aa	Known RBP	2.68	□□□□□ -1.98
GIP3	YPL137C	PIN2	Q12057	282 aa		2.68	□□□□□ -1.98
GIP3	YPL137C	RAD59	Q12223	238 aa		2.68	□□□□□ -1.98
GIP3	YPL137C	RTG2	P32608	588 aa	Known RBP	2.68	□□□□□ -1.98
GIP3	YPL137C	RAD54	P32863	898 aa		2.68	□□□□□ -1.98
GIP3	YPL137C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	2.68	□□□□□ -1.98	RIP-Chip
GIP3	YPL137C	ATG3	P40344	310 aa		2.68	□□□□□ -1.98
GIP3	YPL137C	YJL007C	P47080	104 aa		2.68	□□□□□ -1.98
GIP3	YPL137C	FPK1	P53739	893 aa		2.68	□□□□□ -1.98
GIP3	YPL137C	RPP1B	P10622	106 aa	Known RBP	2.68	□□□□□ -1.98
GIP3	YPL137C	MVP1	P40959	511 aa	Known RBP	2.68	□□□□□ -1.98
GIP3	YPL137C	BUD6	P41697	788 aa		2.68	□□□□□ -1.98
GIP3	YPL137C	LYS4	P49367	693 aa	Predicted RBP	2.68	□□□□□ -1.98
GIP3	YPL137C	PMD1	P32634	1753 aa		2.67	□□□□□ -1.98
GIP3	YPL137C	MTR4	P47047	1073 aa	Known RBP	2.67	□□□□□ -1.98
GIP3	YPL137C	PHO87	P25360	923 aa		2.67	□□□□□ -1.98
GIP3	YPL137C	YKL222C	P35995	705 aa		2.67	□□□□□ -1.98
GIP3	YPL137C	ESL2	P36168	1195 aa		2.67	□□□□□ -1.98
GIP3	YPL137C	CAB1	Q04430	367 aa		2.67	□□□□□ -1.98
GIP3	YPL137C	MST1	P07236	462 aa		2.67	□□□□□ -1.98
GIP3	YPL137C	RDS2	P19541	446 aa	Known RBP	2.67	□□□□□ -1.98
GIP3	YPL137C	MSB3	P48566	633 aa	Predicted RBP	2.67	□□□□□ -1.98
GIP3	YPL137C	CEF1	Q03654	590 aa	Predicted RBP	2.67	□□□□□ -1.98
GIP3	YPL137C	GIN4	Q12263	1142 aa		2.67	□□□□□ -1.98
GIP3	YPL137C	LSO1	Q3E827	93 aa		2.67	□□□□□ -1.98
GIP3	YPL137C	YLR278C	Q05854	1341 aa		2.67	□□□□□ -1.98
GIP3	YPL137C	ENO2	P00925	437 aa	Known RBP	2.66	□□□□□ -1.98
GIP3	YPL137C	SPT2	P06843	333 aa	Predicted RBP	2.66	□□□□□ -1.98
GIP3	YPL137C	SOL3	P38858	249 aa		2.66	□□□□□ -1.98
GIP3	YPL137C	SPR3	P41901	512 aa		2.66	□□□□□ -1.98
GIP3	YPL137C	MDJ2	P42834	146 aa		2.66	□□□□□ -1.98
GIP3	YPL137C	GRE2	Q12068	342 aa	Known RBP	2.66	□□□□□ -1.98
GIP3	YPL137C	APC11	Q12157	165 aa		2.66	□□□□□ -1.98
GIP3	YPL137C	HAP4	P14064	554 aa		2.66	□□□□□ -1.98
GIP3	YPL137C	DPB3	P27344	201 aa		2.66	□□□□□ -1.98
GIP3	YPL137C	PRP45	P28004	379 aa	Predicted RBP	2.66	□□□□□ -1.98
GIP3	YPL137C	KIN4	Q01919	800 aa		2.66	□□□□□ -1.98
GIP3	YPL137C	UBX5	Q06682	500 aa		2.66	□□□□□ -1.98
GIP3	YPL137C	MMP1	Q12372	583 aa		2.66	□□□□□ -1.98
GIP3	YPL137C	YRF1-4	O13559	1382 aa		2.66	□□□□□ -1.98
GIP3	YPL137C	ENO1	P00924	437 aa	Known RBP	2.66	□□□□□ -1.98
GIP3	YPL137C	SRS2	P12954	1174 aa		2.66	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms