RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeastyeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC1YOR142W SWI1P09547 1314 aa8.4□□□□□ -1.06
LSC1YOR142W YDR306CQ06640 478 aa8.4□□□□□ -1.06
LSC1YOR142W ERO1Q03103 563 aa8.39□□□□□ -1.07
LSC1YOR142W FCP1Q03254 732 aa8.39□□□□□ -1.07
LSC1YOR142W SSK22P25390 1331 aaPredicted RBP8.38□□□□□ -1.07
LSC1YOR142W RPP0P05317 312 aaKnown RBP8.38□□□□□ -1.07
LSC1YOR142W SQS1P53866 767 aaKnown RBP8.38□□□□□ -1.07
LSC1YOR142W UBP16Q02863 499 aa8.38□□□□□ -1.07
LSC1YOR142W IRC3Q06683 689 aa8.38□□□□□ -1.07
LSC1YOR142W VPS27P40343 622 aaKnown RBP8.37□□□□□ -1.07
LSC1YOR142W YGR122WP53272 402 aa8.37□□□□□ -1.07
LSC1YOR142W DNM1P54861 757 aa8.37□□□□□ -1.07
LSC1YOR142W YLR271WQ06152 274 aa8.37□□□□□ -1.07
LSC1YOR142W DIB1Q06819 143 aaPredicted RBP8.37□□□□□ -1.07
LSC1YOR142W HAT1Q12341 374 aa8.37□□□□□ -1.07
LSC1YOR142W DUR1,2P32528 1835 aaKnown RBP8.37□□□□□ -1.07
LSC1YOR142W NUP133P36161 1157 aa8.36□□□□□ -1.07
LSC1YOR142W CST6P40535 587 aa8.36□□□□□ -1.07
LSC1YOR142W YJR008WP47085 338 aa8.36□□□□□ -1.07
LSC1YOR142W MRP7P12687 371 aa8.35□□□□□ -1.07
LSC1YOR142W SIT4P20604 311 aa8.35□□□□□ -1.07
LSC1YOR142W ICL1P28240 557 aaPredicted RBP8.35□□□□□ -1.07
LSC1YOR142W PKH1Q03407 766 aa8.35□□□□□ -1.07
LSC1YOR142W FIG2P25653 1609 aa8.34□□□□□ -1.07
LSC1YOR142W HOP09932 586 aa8.34□□□□□ -1.07
LSC1YOR142W FRD1P32614 470 aaKnown RBP8.34□□□□□ -1.07
LSC1YOR142W TOM1Q03280 3268 aa8.34□□□□□ -1.07
LSC1YOR142W TOP1P04786 769 aa8.33□□□□□ -1.08
LSC1YOR142W RPN1P38764 993 aaKnown RBP8.33□□□□□ -1.08
LSC1YOR142W SYF1Q04048 859 aaPredicted RBP8.33□□□□□ -1.08
LSC1YOR142W RVB2Q12464 471 aaKnown RBP8.33□□□□□ -1.08
LSC1YOR142W SWC3P31376 625 aa8.32□□□□□ -1.08
LSC1YOR142W RAD24P32641 659 aa8.32□□□□□ -1.08
LSC1YOR142W RIM101P33400 625 aa8.32□□□□□ -1.08
LSC1YOR142W CDC45Q08032 650 aa8.32□□□□□ -1.08
LSC1YOR142W YGL015CP33199 130 aa8.31□□□□□ -1.08
LSC1YOR142W SET1P38827 1080 aaKnown RBP8.31□□□□□ -1.08
LSC1YOR142W SAS4Q04003 481 aa8.31□□□□□ -1.08
LSC1YOR142W YKU70P32807 602 aa8.3□□□□□ -1.08
LSC1YOR142W ITC1P53125 1264 aa8.3□□□□□ -1.08
LSC1YOR142W FPK1P53739 893 aa8.3□□□□□ -1.08
LSC1YOR142W GRX6Q12438 231 aa8.3□□□□□ -1.08
LSC1YOR142W RET1P22276 1149 aaKnown RBP8.29□□□□□ -1.08
LSC1YOR142W NSR1P27476 414 aaKnown RBP RIP-Chip data8.29□□□□□ -1.08not detected
LSC1YOR142W SET4P42948 560 aa8.29□□□□□ -1.08
LSC1YOR142W HXT10P43581 546 aa8.29□□□□□ -1.08
LSC1YOR142W YPP1P46951 817 aa8.29□□□□□ -1.08
LSC1YOR142W CSI1Q04368 295 aa8.29□□□□□ -1.08
LSC1YOR142W ATG20Q07528 640 aa8.29□□□□□ -1.08
LSC1YOR142W PRS1P32895 427 aaKnown RBP8.28□□□□□ -1.08
LSC1YOR142W SHC1P39000 512 aa8.28□□□□□ -1.08
LSC1YOR142W PSH1Q12161 406 aa8.28□□□□□ -1.08
LSC1YOR142W SAC3P46674 1301 aa8.28□□□□□ -1.08
LSC1YOR142W SLI15P38283 698 aa8.27□□□□□ -1.09
LSC1YOR142W BOI2P39969 1040 aa8.27□□□□□ -1.09
LSC1YOR142W YIL092WP40497 633 aa8.27□□□□□ -1.09
LSC1YOR142W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.27□□□□□ -1.09not detected
LSC1YOR142W PUS5Q06244 254 aa8.27□□□□□ -1.09
LSC1YOR142W SSA4P22202 642 aaKnown RBP8.26□□□□□ -1.09
LSC1YOR142W UBP12P39538 1254 aa8.26□□□□□ -1.09
LSC1YOR142W ICP55P40051 511 aa8.26□□□□□ -1.09
LSC1YOR142W MAK21Q12176 1025 aaKnown RBP8.26□□□□□ -1.09
LSC1YOR142W TRP5P00931 707 aaKnown RBP8.25□□□□□ -1.09
LSC1YOR142W DAL5P15365 543 aa8.25□□□□□ -1.09
LSC1YOR142W SPL2P38839 148 aa8.25□□□□□ -1.09
LSC1YOR142W DPL1Q05567 589 aa8.25□□□□□ -1.09
LSC1YOR142W NOP8Q08287 484 aaPredicted RBP8.25□□□□□ -1.09
LSC1YOR142W DPH6Q12429 685 aa8.25□□□□□ -1.09
LSC1YOR142W YLR278CQ05854 1341 aa8.25□□□□□ -1.09
LSC1YOR142W THS1P04801 734 aaKnown RBP8.24□□□□□ -1.09
LSC1YOR142W GAP1P19145 602 aaPredicted RBP8.24□□□□□ -1.09
LSC1YOR142W KRE2P27809 442 aa8.24□□□□□ -1.09
LSC1YOR142W MGM1P32266 881 aa8.24□□□□□ -1.09
LSC1YOR142W RPT4P53549 437 aaKnown RBP8.24□□□□□ -1.09
LSC1YOR142W THI3Q07471 609 aa8.24□□□□□ -1.09
LSC1YOR142W GAS5Q08193 484 aa8.24□□□□□ -1.09
LSC1YOR142W RPS9BP05755 195 aaKnown RBP8.23□□□□□ -1.09
LSC1YOR142W RPS19AP07280 144 aaKnown RBP8.23□□□□□ -1.09
LSC1YOR142W RPS19BP07281 144 aaPredicted RBP8.23□□□□□ -1.09
LSC1YOR142W NGR1P32831 672 aaKnown RBP8.23□□□□□ -1.09
LSC1YOR142W YRB30P53107 440 aaPredicted RBP8.23□□□□□ -1.09
LSC1YOR142W MTC5Q03897 1148 aa8.23□□□□□ -1.09
LSC1YOR142W TFC8Q12308 588 aa8.23□□□□□ -1.09
LSC1YOR142W GSC2P40989 1895 aa8.23□□□□□ -1.09
LSC1YOR142W ILV3P39522 585 aaKnown RBP8.22□□□□□ -1.09
LSC1YOR142W FUN12P39730 1002 aaKnown RBP8.22□□□□□ -1.09
LSC1YOR142W FLO11P08640 1367 aa8.22□□□□□ -1.09
LSC1YOR142W STV1P37296 890 aa8.2□□□□□ -1.1
LSC1YOR142W PEX21P50091 288 aa8.2□□□□□ -1.1
LSC1YOR142W TOS4Q06266 489 aa8.2□□□□□ -1.1
LSC1YOR142W MSM1P22438 575 aa8.19□□□□□ -1.1
LSC1YOR142W LCB1P25045 558 aaKnown RBP8.19□□□□□ -1.1
LSC1YOR142W RTG2P32608 588 aaKnown RBP8.19□□□□□ -1.1
LSC1YOR142W SLA1P32790 1244 aa8.19□□□□□ -1.1
LSC1YOR142W AFG2P32794 780 aa8.19□□□□□ -1.1
LSC1YOR142W FET4P40988 552 aa8.19□□□□□ -1.1
LSC1YOR142W ADR1P07248 1323 aa8.19□□□□□ -1.1
LSC1YOR142W GSM1P42950 618 aa8.18□□□□□ -1.1
LSC1YOR142W VPS4P52917 437 aa8.18□□□□□ -1.1
LSC1YOR142W SPO1P53541 631 aa8.18□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 147.4 ms