RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS17YOR132W GAS4Q08271 471 aa5.86□□□□□ -1.47
VPS17YOR132W RPS6AP0CX37 236 aaKnown RBP5.85□□□□□ -1.47
VPS17YOR132W RPS6BP0CX38 236 aaPredicted RBP5.85□□□□□ -1.47
VPS17YOR132W GAR1P28007 205 aaKnown RBP5.85□□□□□ -1.47
VPS17YOR132W GLY1P37303 387 aaKnown RBP5.85□□□□□ -1.47
VPS17YOR132W UTP7P40055 554 aaKnown RBP5.85□□□□□ -1.47
VPS17YOR132W SUM1P46676 1062 aa5.85□□□□□ -1.47
VPS17YOR132W TCB1Q12466 1186 aa5.85□□□□□ -1.47
VPS17YOR132W VTC4P47075 721 aa5.84□□□□□ -1.47
VPS17YOR132W SCW11P53189 542 aa5.84□□□□□ -1.47
VPS17YOR132W NOB1Q08444 459 aaKnown RBP5.84□□□□□ -1.47
VPS17YOR132W DAL1P32375 460 aa5.83□□□□□ -1.48
VPS17YOR132W UBX7P38349 436 aa5.83□□□□□ -1.48
VPS17YOR132W MSN5P52918 1224 aa5.83□□□□□ -1.48
VPS17YOR132W CYT1P07143 309 aa5.82□□□□□ -1.48
VPS17YOR132W SSN3P39073 555 aa5.82□□□□□ -1.48
VPS17YOR132W ALA1P40825 983 aaKnown RBP5.82□□□□□ -1.48
VPS17YOR132W ROM1P53046 1155 aa5.82□□□□□ -1.48
VPS17YOR132W VAN1P23642 535 aa5.81□□□□□ -1.48
VPS17YOR132W GBP2P25555 427 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
VPS17YOR132W TY1A-BLQ12266 440 aa5.81□□□□□ -1.48
VPS17YOR132W YPL062WQ02781 134 aa5.8□□□□□ -1.48
VPS17YOR132W YML083CQ04526 418 aa5.8□□□□□ -1.48
VPS17YOR132W YPQ2Q06328 317 aa5.8□□□□□ -1.48
VPS17YOR132W UBP1P25037 809 aa5.79□□□□□ -1.48
VPS17YOR132W AHP1P38013 176 aaKnown RBP5.79□□□□□ -1.48
VPS17YOR132W OSH7P38755 437 aa5.79□□□□□ -1.48
VPS17YOR132W MCM1P11746 286 aa5.79□□□□□ -1.48
VPS17YOR132W TRS33Q99394 268 aa5.79□□□□□ -1.48
VPS17YOR132W CWH41P53008 833 aa5.78□□□□□ -1.48
VPS17YOR132W PUF6Q04373 656 aaKnown RBP5.78□□□□□ -1.48
VPS17YOR132W SSA1P10591 642 aaKnown RBP5.77□□□□□ -1.49
VPS17YOR132W SLA1P32790 1244 aa5.77□□□□□ -1.49
VPS17YOR132W NGR1P32831 672 aaKnown RBP5.77□□□□□ -1.49
VPS17YOR132W ACO2P39533 789 aa5.77□□□□□ -1.49
VPS17YOR132W JJJ2P46997 583 aa5.77□□□□□ -1.49
VPS17YOR132W CDC19P00549 500 aaKnown RBP5.76□□□□□ -1.49
VPS17YOR132W RPL34AP87262 121 aaPredicted RBP5.76□□□□□ -1.49
VPS17YOR132W IRE1P32361 1115 aa5.75□□□□□ -1.49
VPS17YOR132W UBP15P50101 1230 aa5.75□□□□□ -1.49
VPS17YOR132W CAF120P53836 1060 aa5.75□□□□□ -1.49
VPS17YOR132W TY1A-DR3Q12441 440 aa5.74□□□□□ -1.49
VPS17YOR132W PUN1Q06991 263 aa5.73□□□□□ -1.49
VPS17YOR132W YDL176WQ12027 708 aa5.73□□□□□ -1.49
VPS17YOR132W SHM1P37292 490 aaPredicted RBP5.72□□□□□ -1.49
VPS17YOR132W YIR007WP40566 764 aa5.72□□□□□ -1.49
VPS17YOR132W ROG3P43602 733 aa5.72□□□□□ -1.49
VPS17YOR132W CWC15Q03772 175 aaKnown RBP5.72□□□□□ -1.49
VPS17YOR132W TY1A-MR1Q04215 440 aa5.72□□□□□ -1.49
VPS17YOR132W SRS2P12954 1174 aa5.72□□□□□ -1.49
VPS17YOR132W SCD5P34758 872 aa5.72□□□□□ -1.49
VPS17YOR132W YTA6P40328 754 aa5.72□□□□□ -1.49
VPS17YOR132W NAM8Q00539 523 aaKnown RBP5.72□□□□□ -1.49
VPS17YOR132W Q0182Q9ZZW1 134 aa5.72□□□□□ -1.49
VPS17YOR132W RPS31P05759 152 aaKnown RBP5.71□□□□□ -1.5
VPS17YOR132W SUV3P32580 737 aa5.71□□□□□ -1.5
VPS17YOR132W PDC6P26263 563 aaKnown RBP5.7□□□□□ -1.5
VPS17YOR132W GEF1P37020 779 aa5.7□□□□□ -1.5
VPS17YOR132W HXT5P38695 592 aa5.7□□□□□ -1.5
VPS17YOR132W ALD4P46367 519 aaKnown RBP5.7□□□□□ -1.5
VPS17YOR132W YNL165WP53891 406 aa5.7□□□□□ -1.5
VPS17YOR132W UTP4Q06679 776 aaKnown RBP5.7□□□□□ -1.5
VPS17YOR132W PSH1Q12161 406 aa5.69□□□□□ -1.5
VPS17YOR132W MLF3P32047 452 aa5.69□□□□□ -1.5
VPS17YOR132W PNP1Q05788 311 aa5.69□□□□□ -1.5
VPS17YOR132W CAB1Q04430 367 aa5.68□□□□□ -1.5
VPS17YOR132W CCP1P00431 361 aa5.67□□□□□ -1.5
VPS17YOR132W LEU1P07264 779 aaKnown RBP5.67□□□□□ -1.5
VPS17YOR132W YBR197CP38306 217 aa5.67□□□□□ -1.5
VPS17YOR132W CUZ1P53899 274 aa5.66□□□□□ -1.5
VPS17YOR132W FOX2Q02207 900 aaKnown RBP5.66□□□□□ -1.5
VPS17YOR132W YMR265CQ03508 461 aaKnown RBP5.66□□□□□ -1.5
VPS17YOR132W DIT1P21623 536 aa5.66□□□□□ -1.5
VPS17YOR132W RRN6P32786 894 aa5.66□□□□□ -1.5
VPS17YOR132W TPS3P38426 1054 aaKnown RBP5.66□□□□□ -1.5
VPS17YOR132W CDC3P32457 520 aaKnown RBP5.65□□□□□ -1.51
VPS17YOR132W ALD2P47771 506 aa5.65□□□□□ -1.51
VPS17YOR132W MTO1P53070 669 aa5.65□□□□□ -1.51
VPS17YOR132W MRPL33P20084 86 aa5.64□□□□□ -1.51
VPS17YOR132W ISC10P32645 267 aa5.64□□□□□ -1.51
VPS17YOR132W KAP122P32767 1081 aa5.64□□□□□ -1.51
VPS17YOR132W MRPL16P38064 232 aa5.64□□□□□ -1.51
VPS17YOR132W FUR4P05316 633 aaKnown RBP5.63□□□□□ -1.51
VPS17YOR132W RPP1AP05318 106 aaPredicted RBP5.63□□□□□ -1.51
VPS17YOR132W CEM1P39525 442 aa5.63□□□□□ -1.51
VPS17YOR132W KRE33P53914 1056 aaKnown RBP5.63□□□□□ -1.51
VPS17YOR132W STB3Q12427 513 aa5.63□□□□□ -1.51
VPS17YOR132W RGP1P16664 663 aa5.63□□□□□ -1.51
VPS17YOR132W LYS5P50113 272 aa5.63□□□□□ -1.51
VPS17YOR132W YGR035CP53222 116 aa5.63□□□□□ -1.51
VPS17YOR132W VMA3P25515 160 aa5.62□□□□□ -1.51
VPS17YOR132W QDR2P40474 542 aa5.62□□□□□ -1.51
VPS17YOR132W KAR5Q04746 504 aa5.62□□□□□ -1.51
VPS17YOR132W HPF1Q05164 967 aa5.62□□□□□ -1.51
VPS17YOR132W YDR461C-AQ2V2P7 80 aa5.62□□□□□ -1.51
VPS17YOR132W SPR3P41901 512 aa5.61□□□□□ -1.51
VPS17YOR132W ADE12P80210 433 aaKnown RBP5.61□□□□□ -1.51
VPS17YOR132W LDH1P38139 375 aa5.6□□□□□ -1.51
VPS17YOR132W DYS1P38791 387 aa5.6□□□□□ -1.51
VPS17YOR132W DPH6Q12429 685 aa5.6□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms