RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W ALA1P40825 983 aaKnown RBP8.59□□□□□ -1.03
VAM3YOR106W MSN5P52918 1224 aa8.59□□□□□ -1.03
VAM3YOR106W RPS6AP0CX37 236 aaKnown RBP8.58□□□□□ -1.04
VAM3YOR106W RPS6BP0CX38 236 aaPredicted RBP8.58□□□□□ -1.04
VAM3YOR106W HAP4P14064 554 aa8.58□□□□□ -1.04
VAM3YOR106W GAL2P13181 574 aa8.57□□□□□ -1.04
VAM3YOR106W SSA4P22202 642 aaKnown RBP8.57□□□□□ -1.04
VAM3YOR106W DAL1P32375 460 aa8.57□□□□□ -1.04
VAM3YOR106W AHP1P38013 176 aaKnown RBP8.57□□□□□ -1.04
VAM3YOR106W OSH7P38755 437 aa8.57□□□□□ -1.04
VAM3YOR106W ACO2P39533 789 aa8.57□□□□□ -1.04
VAM3YOR106W ACS2P52910 683 aaKnown RBP8.57□□□□□ -1.04
VAM3YOR106W SSN3P39073 555 aa8.56□□□□□ -1.04
VAM3YOR106W YPL062WQ02781 134 aa8.55□□□□□ -1.04
VAM3YOR106W GAS4Q08271 471 aa8.55□□□□□ -1.04
VAM3YOR106W YDL176WQ12027 708 aa8.55□□□□□ -1.04
VAM3YOR106W ECM23Q02710 187 aa8.54□□□□□ -1.04
VAM3YOR106W YIR007WP40566 764 aa8.53□□□□□ -1.04
VAM3YOR106W CDC19P00549 500 aaKnown RBP8.52□□□□□ -1.05
VAM3YOR106W CYT1P07143 309 aa8.52□□□□□ -1.05
VAM3YOR106W RGA2Q06407 1009 aa8.52□□□□□ -1.05
VAM3YOR106W ROG3P43602 733 aa8.51□□□□□ -1.05
VAM3YOR106W JJJ2P46997 583 aa8.51□□□□□ -1.05
VAM3YOR106W PUP1P25043 261 aa8.49□□□□□ -1.05
VAM3YOR106W UBX7P38349 436 aa8.49□□□□□ -1.05
VAM3YOR106W UBP15P50101 1230 aa8.49□□□□□ -1.05
VAM3YOR106W ROM1P53046 1155 aa8.49□□□□□ -1.05
VAM3YOR106W TY1A-MR1Q04215 440 aa8.49□□□□□ -1.05
VAM3YOR106W YPQ2Q06328 317 aa8.49□□□□□ -1.05
VAM3YOR106W TY1A-DR3Q12441 440 aa8.49□□□□□ -1.05
VAM3YOR106W SLA1P32790 1244 aa8.48□□□□□ -1.05
VAM3YOR106W MCM1P11746 286 aa8.47□□□□□ -1.05
VAM3YOR106W VAN1P23642 535 aa8.47□□□□□ -1.05
VAM3YOR106W IRE1P32361 1115 aa8.46□□□□□ -1.06
VAM3YOR106W UBP1P25037 809 aa8.45□□□□□ -1.06
VAM3YOR106W RGA1P39083 1007 aa8.45□□□□□ -1.06
VAM3YOR106W NAM8Q00539 523 aaKnown RBP8.45□□□□□ -1.06
VAM3YOR106W TRS33Q99394 268 aa8.43□□□□□ -1.06
VAM3YOR106W SHM1P37292 490 aaPredicted RBP8.42□□□□□ -1.06
VAM3YOR106W YTA6P40328 754 aa8.42□□□□□ -1.06
VAM3YOR106W CWH41P53008 833 aa8.42□□□□□ -1.06
VAM3YOR106W NOB1Q08444 459 aaKnown RBP8.42□□□□□ -1.06
VAM3YOR106W YML083CQ04526 418 aa8.41□□□□□ -1.06
VAM3YOR106W SUB2Q07478 446 aaKnown RBP8.41□□□□□ -1.06
VAM3YOR106W CCP1P00431 361 aa8.4□□□□□ -1.06
VAM3YOR106W NGR1P32831 672 aaKnown RBP8.4□□□□□ -1.06
VAM3YOR106W YGR035CP53222 116 aa8.4□□□□□ -1.06
VAM3YOR106W PDC6P26263 563 aaKnown RBP8.39□□□□□ -1.07
VAM3YOR106W CUZ1P53899 274 aa8.39□□□□□ -1.07
VAM3YOR106W PSH1Q12161 406 aa8.39□□□□□ -1.07
VAM3YOR106W Q0182Q9ZZW1 134 aa8.39□□□□□ -1.07
VAM3YOR106W YMR265CQ03508 461 aaKnown RBP8.38□□□□□ -1.07
VAM3YOR106W PUF6Q04373 656 aaKnown RBP8.38□□□□□ -1.07
VAM3YOR106W TAF7Q05021 590 aa8.38□□□□□ -1.07
VAM3YOR106W HPF1Q05164 967 aa8.38□□□□□ -1.07
VAM3YOR106W MLF3P32047 452 aa8.37□□□□□ -1.07
VAM3YOR106W SCD5P34758 872 aa8.37□□□□□ -1.07
VAM3YOR106W YNL165WP53891 406 aa8.37□□□□□ -1.07
VAM3YOR106W RPS31P05759 152 aaKnown RBP8.36□□□□□ -1.07
VAM3YOR106W DIT1P21623 536 aa8.36□□□□□ -1.07
VAM3YOR106W CEM1P39525 442 aa8.36□□□□□ -1.07
VAM3YOR106W LYS5P50113 272 aa8.35□□□□□ -1.07
VAM3YOR106W UTP4Q06679 776 aaKnown RBP8.34□□□□□ -1.07
VAM3YOR106W PUN1Q06991 263 aa8.34□□□□□ -1.07
VAM3YOR106W MRPL16P38064 232 aa8.33□□□□□ -1.08
VAM3YOR106W KRE33P53914 1056 aaKnown RBP8.33□□□□□ -1.08
VAM3YOR106W STB3Q12427 513 aa8.33□□□□□ -1.08
VAM3YOR106W DPH6Q12429 685 aa8.33□□□□□ -1.08
VAM3YOR106W HXT5P38695 592 aa8.32□□□□□ -1.08
VAM3YOR106W LEU1P07264 779 aaKnown RBP8.31□□□□□ -1.08
VAM3YOR106W SUV3P32580 737 aa8.31□□□□□ -1.08
VAM3YOR106W ALD4P46367 519 aaKnown RBP8.31□□□□□ -1.08
VAM3YOR106W RPL34AP87262 121 aaPredicted RBP8.31□□□□□ -1.08
VAM3YOR106W FOX2Q02207 900 aaKnown RBP8.31□□□□□ -1.08
VAM3YOR106W MTO1P53070 669 aa8.3□□□□□ -1.08
VAM3YOR106W ADE12P80210 433 aaKnown RBP8.3□□□□□ -1.08
VAM3YOR106W RPP1AP05318 106 aaPredicted RBP8.29□□□□□ -1.08
VAM3YOR106W SRS2P12954 1174 aa8.29□□□□□ -1.08
VAM3YOR106W TRK2P28584 889 aa8.29□□□□□ -1.08
VAM3YOR106W ALD2P47771 506 aa8.29□□□□□ -1.08
VAM3YOR106W CAB1Q04430 367 aa8.29□□□□□ -1.08
VAM3YOR106W YDR461C-AQ2V2P7 80 aa8.29□□□□□ -1.08
VAM3YOR106W SSA1P10591 642 aaKnown RBP8.28□□□□□ -1.08
VAM3YOR106W FPS1P23900 669 aa8.28□□□□□ -1.08
VAM3YOR106W JJJ3P47138 172 aa8.28□□□□□ -1.08
VAM3YOR106W SYT1Q06836 1226 aa8.28□□□□□ -1.08
VAM3YOR106W RGP1P16664 663 aa8.27□□□□□ -1.09
VAM3YOR106W CWC15Q03772 175 aaKnown RBP8.27□□□□□ -1.09
VAM3YOR106W YBR197CP38306 217 aa8.25□□□□□ -1.09
VAM3YOR106W SPR3P41901 512 aa8.25□□□□□ -1.09
VAM3YOR106W KAP122P32767 1081 aa8.24□□□□□ -1.09
VAM3YOR106W PNP1Q05788 311 aa8.24□□□□□ -1.09
VAM3YOR106W MRPL33P20084 86 aa8.23□□□□□ -1.09
VAM3YOR106W ISC10P32645 267 aa8.23□□□□□ -1.09
VAM3YOR106W QDR2P40474 542 aa8.23□□□□□ -1.09
VAM3YOR106W RRN6P32786 894 aa8.21□□□□□ -1.1
VAM3YOR106W TPS3P38426 1054 aaKnown RBP8.21□□□□□ -1.1
VAM3YOR106W VMA3P25515 160 aa8.2□□□□□ -1.1
VAM3YOR106W DYS1P38791 387 aa8.19□□□□□ -1.1
VAM3YOR106W CUS1Q02554 436 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 31 ms