RNA–Protein interactions for RNA: YOL006C

TOP1, Transcript of Topoisomerase I, yeast

Gene TOP1, Length 2,310 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOP1	YOL006C	ATH1	P48016	1211 aa		4.11	□□□□□ -1.75
TOP1	YOL006C	RTF1	P53064	558 aa		4.11	□□□□□ -1.75
TOP1	YOL006C	PEX8	P53248	589 aa		4.11	□□□□□ -1.75
TOP1	YOL006C	SPO20	Q04359	397 aa		4.11	□□□□□ -1.75
TOP1	YOL006C	ENV9	Q08651	330 aa		4.11	□□□□□ -1.75
TOP1	YOL006C	PEP7	P32609	515 aa		4.11	□□□□□ -1.75
TOP1	YOL006C	TAT2	P38967	592 aa		4.11	□□□□□ -1.75
TOP1	YOL006C	UBP9	P39967	754 aa		4.11	□□□□□ -1.75
TOP1	YOL006C	CWC24	P53769	259 aa		4.11	□□□□□ -1.75
TOP1	YOL006C	ATG16	Q03818	150 aa		4.11	□□□□□ -1.75
TOP1	YOL006C	MTC5	Q03897	1148 aa		4.11	□□□□□ -1.75
TOP1	YOL006C	PUN1	Q06991	263 aa		4.11	□□□□□ -1.75
TOP1	YOL006C	YOR378W	Q08902	515 aa		4.11	□□□□□ -1.75
TOP1	YOL006C	DPS1	P04802	557 aa	Known RBP	4.1	□□□□□ -1.75
TOP1	YOL006C	PHO87	P25360	923 aa		4.1	□□□□□ -1.75
TOP1	YOL006C	GRX1	P25373	110 aa	Known RBP	4.1	□□□□□ -1.75
TOP1	YOL006C	YLR125W	Q12138	136 aa		4.1	□□□□□ -1.75
TOP1	YOL006C	HAP4	P14064	554 aa		4.1	□□□□□ -1.75
TOP1	YOL006C	GUT1	P32190	709 aa		4.1	□□□□□ -1.75
TOP1	YOL006C	MEH1	Q02205	184 aa		4.1	□□□□□ -1.75
TOP1	YOL006C	YOL036W	Q08206	761 aa		4.1	□□□□□ -1.75
TOP1	YOL006C	PHO4	P07270	312 aa	Known RBP	4.09	□□□□□ -1.75
TOP1	YOL006C	DAL5	P15365	543 aa		4.09	□□□□□ -1.75
TOP1	YOL006C	SIT4	P20604	311 aa		4.09	□□□□□ -1.75
TOP1	YOL006C	OPI1	P21957	404 aa		4.09	□□□□□ -1.75
TOP1	YOL006C	PET112	P33893	541 aa		4.09	□□□□□ -1.75
TOP1	YOL006C	MNR2	P35724	969 aa		4.09	□□□□□ -1.75
TOP1	YOL006C	SNF7	P39929	240 aa	Known RBP	4.09	□□□□□ -1.75
TOP1	YOL006C	ROM1	P53046	1155 aa		4.09	□□□□□ -1.75
TOP1	YOL006C	FOX2	Q02207	900 aa	Known RBP	4.09	□□□□□ -1.75
TOP1	YOL006C	GDE1	Q02979	1223 aa		4.09	□□□□□ -1.75
TOP1	YOL006C	SLX4	Q12098	748 aa		4.09	□□□□□ -1.75
TOP1	YOL006C	RAD4	P14736	754 aa		4.09	□□□□□ -1.76
TOP1	YOL006C	ISF1	P32488	338 aa		4.09	□□□□□ -1.76
TOP1	YOL006C	MAL31	P38156	614 aa		4.09	□□□□□ -1.76
TOP1	YOL006C	YGR021W	P53212	290 aa		4.09	□□□□□ -1.76
TOP1	YOL006C	GRE2	Q12068	342 aa	Known RBP	4.09	□□□□□ -1.76
TOP1	YOL006C	SNU66	Q12420	587 aa	Predicted RBP	4.09	□□□□□ -1.76
TOP1	YOL006C	NOP14	Q99207	810 aa	Known RBP	4.09	□□□□□ -1.76
TOP1	YOL006C	TAF13	P11747	167 aa		4.08	□□□□□ -1.76
TOP1	YOL006C	THI4	P32318	326 aa		4.08	□□□□□ -1.76
TOP1	YOL006C	CDC11	P32458	415 aa		4.08	□□□□□ -1.76
TOP1	YOL006C	RPS26A	P39938	119 aa	Known RBP	4.08	□□□□□ -1.76
TOP1	YOL006C	RPS26B	P39939	119 aa	Known RBP	4.08	□□□□□ -1.76
TOP1	YOL006C	CHZ1	P40019	153 aa	Predicted RBP	4.08	□□□□□ -1.76
TOP1	YOL006C	HOS4	P40480	1083 aa		4.08	□□□□□ -1.76
TOP1	YOL006C	BDP1	P46678	594 aa		4.08	□□□□□ -1.76
TOP1	YOL006C	ACS2	P52910	683 aa	Known RBP	4.08	□□□□□ -1.76
TOP1	YOL006C	TIM54	P47045	478 aa		4.07	□□□□□ -1.76
TOP1	YOL006C	YNR029C	P53729	429 aa	Known RBP	4.07	□□□□□ -1.76
TOP1	YOL006C	TRS120	Q04183	1289 aa		4.07	□□□□□ -1.76
TOP1	YOL006C	GPI13	Q07830	1017 aa		4.07	□□□□□ -1.76
TOP1	YOL006C	YOR238W	Q08634	303 aa		4.07	□□□□□ -1.76
TOP1	YOL006C	DAS1	P47005	663 aa		4.07	□□□□□ -1.76
TOP1	YOL006C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
TOP1	YOL006C	YPR109W	Q06104	294 aa		4.07	□□□□□ -1.76
TOP1	YOL006C	ADR1	P07248	1323 aa		4.07	□□□□□ -1.76
TOP1	YOL006C	SLY41	P22215	453 aa		4.06	□□□□□ -1.76
TOP1	YOL006C	MTC2	P34246	357 aa		4.06	□□□□□ -1.76
TOP1	YOL006C	SPR3	P41901	512 aa		4.06	□□□□□ -1.76
TOP1	YOL006C	SCY1	P53009	804 aa		4.06	□□□□□ -1.76
TOP1	YOL006C	MDM1	Q01846	1127 aa		4.06	□□□□□ -1.76
TOP1	YOL006C	PSK2	Q08217	1101 aa		4.06	□□□□□ -1.76
TOP1	YOL006C	NYV1	Q12255	253 aa		4.06	□□□□□ -1.76
TOP1	YOL006C	TMA7	Q3E764	64 aa	Known RBP	4.06	□□□□□ -1.76
TOP1	YOL006C	NHA1	Q99271	985 aa		4.06	□□□□□ -1.76
TOP1	YOL006C	GAP1	P19145	602 aa	Predicted RBP	4.06	□□□□□ -1.76
TOP1	YOL006C	GCD6	P32501	712 aa	Known RBP	4.06	□□□□□ -1.76
TOP1	YOL006C	SPT16	P32558	1035 aa	Known RBP	4.06	□□□□□ -1.76
TOP1	YOL006C	IES5	P40060	125 aa		4.06	□□□□□ -1.76
TOP1	YOL006C	VID27	P40157	782 aa		4.06	□□□□□ -1.76
TOP1	YOL006C	NAN1	Q02931	896 aa	Known RBP	4.06	□□□□□ -1.76
TOP1	YOL006C	GAS4	Q08271	471 aa		4.06	□□□□□ -1.76
TOP1	YOL006C	TY4B-P	A0A0B7P3V8	1104 aa		4.05	□□□□□ -1.76
TOP1	YOL006C	ATP4	P05626	244 aa		4.05	□□□□□ -1.76
TOP1	YOL006C	CYC8	P14922	966 aa		4.05	□□□□□ -1.76
TOP1	YOL006C	VMA1	P17255	1071 aa	Known RBP	4.05	□□□□□ -1.76
TOP1	YOL006C	LSO1	Q3E827	93 aa		4.05	□□□□□ -1.76
TOP1	YOL006C	TY4A-H	Q6Q5P6	413 aa		4.05	□□□□□ -1.76
TOP1	YOL006C	YHR020W	P38708	688 aa	Known RBP	4.05	□□□□□ -1.76
TOP1	YOL006C	YGR122W	P53272	402 aa		4.05	□□□□□ -1.76
TOP1	YOL006C	TDA5	Q06417	326 aa	Known RBP	4.05	□□□□□ -1.76
TOP1	YOL006C	CSC1	Q06538	782 aa		4.05	□□□□□ -1.76
TOP1	YOL006C	TMA17	Q12513	150 aa		4.05	□□□□□ -1.76
TOP1	YOL006C	TFC3	P34111	1160 aa		4.04	□□□□□ -1.76
TOP1	YOL006C	SOL3	P38858	249 aa		4.04	□□□□□ -1.76
TOP1	YOL006C	SND1	Q04007	877 aa		4.04	□□□□□ -1.76
TOP1	YOL006C	MPH2	P0CD99	609 aa		4.04	□□□□□ -1.76
TOP1	YOL006C	MPH3	P0CE00	602 aa		4.04	□□□□□ -1.76
TOP1	YOL006C	TRM1	P15565	570 aa	Known RBP	4.04	□□□□□ -1.76
TOP1	YOL006C	YEF3	P16521	1044 aa	Known RBP	4.04	□□□□□ -1.76
TOP1	YOL006C	VAN1	P23642	535 aa		4.04	□□□□□ -1.76
TOP1	YOL006C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
TOP1	YOL006C	HIR1	P32479	840 aa		4.04	□□□□□ -1.76
TOP1	YOL006C	EBP2	P36049	427 aa	Known RBP	4.04	□□□□□ -1.76
TOP1	YOL006C	YAP1801	P38856	637 aa		4.04	□□□□□ -1.76
TOP1	YOL006C	ATG3	P40344	310 aa		4.04	□□□□□ -1.76
TOP1	YOL006C	NIT1	P40447	199 aa		4.04	□□□□□ -1.76
TOP1	YOL006C	SAM37	P50110	327 aa		4.04	□□□□□ -1.76
TOP1	YOL006C	TRS33	Q99394	268 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms