RNA–Protein interactions for RNA: YLR247C

IRC20, Transcript of E3 ubiquitin ligase and putative helicase, yeastyeast

Gene IRC20, Length 4,671 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC20YLR247C AIM44Q99299 758 aa2.44□□□□□ -2.02
IRC20YLR247C NUP145P49687 1317 aa2.44□□□□□ -2.02
IRC20YLR247C CLA4P48562 842 aa2.44□□□□□ -2.02
IRC20YLR247C RIX7Q07844 837 aaKnown RBP2.44□□□□□ -2.02
IRC20YLR247C BMT6Q12291 365 aa2.44□□□□□ -2.02
IRC20YLR247C LDB19Q12502 818 aa2.44□□□□□ -2.02
IRC20YLR247C CHZ1P40019 153 aaPredicted RBP2.44□□□□□ -2.02
IRC20YLR247C CTF4Q01454 927 aa2.44□□□□□ -2.02
IRC20YLR247C FRK1Q03002 865 aaPredicted RBP2.44□□□□□ -2.02
IRC20YLR247C MNN4P36044 1178 aa2.43□□□□□ -2.02
IRC20YLR247C BSD2P38356 321 aa2.43□□□□□ -2.02
IRC20YLR247C TAF8Q03750 510 aa2.43□□□□□ -2.02
IRC20YLR247C PEA2P40091 420 aa2.43□□□□□ -2.02
IRC20YLR247C ECM30Q06673 1274 aa2.43□□□□□ -2.02
IRC20YLR247C GYP5Q12344 894 aa2.43□□□□□ -2.02
IRC20YLR247C SQS1P53866 767 aaKnown RBP2.43□□□□□ -2.02
IRC20YLR247C TAP42Q04372 366 aa2.43□□□□□ -2.02
IRC20YLR247C DIB1Q06819 143 aaPredicted RBP2.43□□□□□ -2.02
IRC20YLR247C TUS1Q06412 1307 aa2.42□□□□□ -2.02
IRC20YLR247C OSM1P21375 501 aaKnown RBP2.42□□□□□ -2.02
IRC20YLR247C SMY1P32364 656 aaKnown RBP2.42□□□□□ -2.02
IRC20YLR247C GRX6Q12438 231 aa2.42□□□□□ -2.02
IRC20YLR247C DCW1P36091 449 aa2.42□□□□□ -2.02
IRC20YLR247C YOL036WQ08206 761 aa2.42□□□□□ -2.02
IRC20YLR247C MDG1P53885 366 aa2.42□□□□□ -2.02
IRC20YLR247C PHM7Q12252 991 aa2.42□□□□□ -2.02
IRC20YLR247C CWH41P53008 833 aa2.42□□□□□ -2.02
IRC20YLR247C NCR1Q12200 1170 aa2.42□□□□□ -2.02
IRC20YLR247C YDR034W-BQ6Q5X2 51 aa2.42□□□□□ -2.02
IRC20YLR247C RTG1P32607 177 aa2.41□□□□□ -2.02
IRC20YLR247C ATH1P48016 1211 aa2.41□□□□□ -2.02
IRC20YLR247C YGR117CP53270 476 aa2.41□□□□□ -2.02
IRC20YLR247C HTA1P04911 132 aaKnown RBP2.41□□□□□ -2.02
IRC20YLR247C HTA2P04912 132 aa2.41□□□□□ -2.02
IRC20YLR247C WHI3P34761 661 aaKnown RBP2.41□□□□□ -2.02
IRC20YLR247C EMP47P43555 445 aa2.41□□□□□ -2.02
IRC20YLR247C VMA1P17255 1071 aaKnown RBP2.41□□□□□ -2.02
IRC20YLR247C TIM50Q02776 476 aa2.41□□□□□ -2.02
IRC20YLR247C PEX29Q03370 554 aa2.41□□□□□ -2.02
IRC20YLR247C PAF1P38351 445 aa2.4□□□□□ -2.02
IRC20YLR247C RRT6P53117 311 aaPredicted RBP2.4□□□□□ -2.03
IRC20YLR247C YNL035CP53962 389 aaKnown RBP2.4□□□□□ -2.03
IRC20YLR247C TUM1Q08686 304 aaKnown RBP2.4□□□□□ -2.03
IRC20YLR247C RRT14P40470 206 aa2.4□□□□□ -2.03
IRC20YLR247C VHR2P40041 505 aa2.39□□□□□ -2.03
IRC20YLR247C RAT1Q02792 1006 aaKnown RBP2.39□□□□□ -2.03
IRC20YLR247C TRP5P00931 707 aaKnown RBP2.39□□□□□ -2.03
IRC20YLR247C RPS24AP0CX31 135 aaKnown RBP2.39□□□□□ -2.03
IRC20YLR247C RPS24BP0CX32 135 aaKnown RBP2.39□□□□□ -2.03
IRC20YLR247C APE3P37302 537 aaKnown RBP2.39□□□□□ -2.03
IRC20YLR247C UTP7P40055 554 aaKnown RBP2.39□□□□□ -2.03
IRC20YLR247C YNR014WP53719 212 aa2.39□□□□□ -2.03
IRC20YLR247C NAB3P38996 802 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
IRC20YLR247C ADR1P07248 1323 aa2.39□□□□□ -2.03
IRC20YLR247C SAP30P38429 201 aa2.38□□□□□ -2.03
IRC20YLR247C FKH1P40466 484 aa2.38□□□□□ -2.03
IRC20YLR247C DPL1Q05567 589 aa2.38□□□□□ -2.03
IRC20YLR247C PCS60P38137 543 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03 RIP-Chip
IRC20YLR247C CSR2Q12734 1121 aa2.38□□□□□ -2.03
IRC20YLR247C THS1P04801 734 aaKnown RBP2.38□□□□□ -2.03
IRC20YLR247C VPS29P38759 282 aa2.38□□□□□ -2.03
IRC20YLR247C SLI15P38283 698 aa2.38□□□□□ -2.03
IRC20YLR247C JIP4Q03361 876 aa2.38□□□□□ -2.03
IRC20YLR247C CSE4P36012 229 aa2.37□□□□□ -2.03
IRC20YLR247C STS1P38637 319 aa2.37□□□□□ -2.03
IRC20YLR247C FPR3P38911 411 aaKnown RBP2.37□□□□□ -2.03
IRC20YLR247C ELP4Q02884 456 aaKnown RBP2.37□□□□□ -2.03
IRC20YLR247C IOC4Q04213 475 aa2.37□□□□□ -2.03
IRC20YLR247C VPS13Q07878 3144 aa2.37□□□□□ -2.03
IRC20YLR247C GRX4P32642 244 aa2.37□□□□□ -2.03
IRC20YLR247C RSC30P38781 883 aa2.37□□□□□ -2.03
IRC20YLR247C FUN12P39730 1002 aaKnown RBP2.37□□□□□ -2.03
IRC20YLR247C FET4P40988 552 aa2.37□□□□□ -2.03
IRC20YLR247C CWC15Q03772 175 aaKnown RBP2.37□□□□□ -2.03
IRC20YLR247C FLO11P08640 1367 aa2.37□□□□□ -2.03
IRC20YLR247C YKU70P32807 602 aa2.36□□□□□ -2.03
IRC20YLR247C SEC61P32915 480 aa2.36□□□□□ -2.03
IRC20YLR247C SPE2P21182 396 aa2.36□□□□□ -2.03
IRC20YLR247C YJR008WP47085 338 aa2.36□□□□□ -2.03
IRC20YLR247C FMP30Q02883 468 aa2.36□□□□□ -2.03
IRC20YLR247C YLR422WQ06409 1932 aa2.36□□□□□ -2.03
IRC20YLR247C ARG8P18544 423 aa2.36□□□□□ -2.03
IRC20YLR247C YFL040WP43562 540 aa2.36□□□□□ -2.03
IRC20YLR247C SYF1Q04048 859 aaPredicted RBP2.36□□□□□ -2.03
IRC20YLR247C RBA50Q04418 439 aa2.36□□□□□ -2.03
IRC20YLR247C YDL129WQ07555 291 aa2.36□□□□□ -2.03
IRC20YLR247C AIR2Q12476 344 aaKnown RBP2.36□□□□□ -2.03
IRC20YLR247C ATG13Q06628 738 aa2.35□□□□□ -2.03
IRC20YLR247C SAC3P46674 1301 aa2.35□□□□□ -2.03
IRC20YLR247C GAP1P19145 602 aaPredicted RBP2.35□□□□□ -2.03
IRC20YLR247C HPC2Q01448 625 aa2.35□□□□□ -2.03
IRC20YLR247C DIT2P21595 489 aa2.35□□□□□ -2.03
IRC20YLR247C ENP1P38333 483 aaKnown RBP2.35□□□□□ -2.03
IRC20YLR247C YEL023CP39992 682 aa2.35□□□□□ -2.03
IRC20YLR247C FIR1P40020 876 aa2.35□□□□□ -2.03
IRC20YLR247C ORC1P54784 914 aaPredicted RBP2.35□□□□□ -2.03
IRC20YLR247C ICL1P28240 557 aaPredicted RBP2.34□□□□□ -2.03
IRC20YLR247C UBX2Q04228 584 aa2.34□□□□□ -2.03
IRC20YLR247C YLR225CQ05948 407 aaKnown RBP2.34□□□□□ -2.03
IRC20YLR247C SAM3Q08986 587 aa2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms