RNA–Protein interactions for RNA: YKR065C

PAM17, Transcript of Constituent of the TIM23 complex, yeast

Gene PAM17, Length 594 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM17	YKR065C	YCF1	P39109	1515 aa	Known RBP	11.4	□□□□□ -0.58
PAM17	YKR065C	SPT2	P06843	333 aa	Predicted RBP	11.4	□□□□□ -0.58
PAM17	YKR065C	SOH1	P38633	127 aa		11.4	□□□□□ -0.58
PAM17	YKR065C	DLD3	P39976	496 aa	Known RBP	11.39	□□□□□ -0.59
PAM17	YKR065C	YDL176W	Q12027	708 aa		11.39	□□□□□ -0.59
PAM17	YKR065C	TY1A-BL	Q12266	440 aa		11.39	□□□□□ -0.59
PAM17	YKR065C	ACO2	P39533	789 aa		11.38	□□□□□ -0.59
PAM17	YKR065C	RTG2	P32608	588 aa	Known RBP	11.37	□□□□□ -0.59
PAM17	YKR065C	HAL5	P38970	855 aa	Known RBP	11.37	□□□□□ -0.59
PAM17	YKR065C	MRX10	Q05648	414 aa		11.37	□□□□□ -0.59
PAM17	YKR065C	TCB1	Q12466	1186 aa		11.37	□□□□□ -0.59
PAM17	YKR065C	UTR2	P32623	467 aa		11.36	□□□□□ -0.59
PAM17	YKR065C	RDS2	P19541	446 aa	Known RBP	11.35	□□□□□ -0.59
PAM17	YKR065C	RKR1	Q04781	1562 aa		11.34	□□□□□ -0.59
PAM17	YKR065C	WTM2	Q12206	467 aa		11.34	□□□□□ -0.59
PAM17	YKR065C	YTA7	P40340	1379 aa		11.33	□□□□□ -0.6
PAM17	YKR065C	ENO1	P00924	437 aa	Known RBP	11.33	□□□□□ -0.6
PAM17	YKR065C	VTC4	P47075	721 aa		11.33	□□□□□ -0.6
PAM17	YKR065C	CAF120	P53836	1060 aa		11.33	□□□□□ -0.6
PAM17	YKR065C	STU1	P38198	1513 aa		11.33	□□□□□ -0.6
PAM17	YKR065C	SMC4	Q12267	1418 aa		11.33	□□□□□ -0.6
PAM17	YKR065C	CHD1	P32657	1468 aa		11.32	□□□□□ -0.6
PAM17	YKR065C	TBS1	P38114	1094 aa		11.32	□□□□□ -0.6
PAM17	YKR065C	DAT1	P13483	248 aa	Known RBP	11.31	□□□□□ -0.6
PAM17	YKR065C	YOR1	P53049	1477 aa		11.31	□□□□□ -0.6
PAM17	YKR065C	HDA3	Q06623	655 aa		11.3	□□□□□ -0.6
PAM17	YKR065C	OSH7	P38755	437 aa		11.27	□□□□□ -0.61
PAM17	YKR065C	YPR204W	Q08995	1032 aa		11.27	□□□□□ -0.61
PAM17	YKR065C	CDC25	P04821	1589 aa		11.27	□□□□□ -0.61
PAM17	YKR065C	TY2B-LR1	P0C2J3	1770 aa		11.26	□□□□□ -0.61
PAM17	YKR065C	TY2B-F	P0CX63	1770 aa		11.26	□□□□□ -0.61
PAM17	YKR065C	TY2B-GR2	P0CX64	1770 aa		11.26	□□□□□ -0.61
PAM17	YKR065C	TY2B-C	P25384	1770 aa		11.26	□□□□□ -0.61
PAM17	YKR065C	TY2B-DR2	Q03494	1770 aa		11.26	□□□□□ -0.61
PAM17	YKR065C	TY1B-DR1	Q03855	1755 aa		11.26	□□□□□ -0.61
PAM17	YKR065C	TY2B-DR3	Q07791	1770 aa	Known RBP	11.26	□□□□□ -0.61
PAM17	YKR065C	TY2B-OR1	Q12113	1770 aa		11.26	□□□□□ -0.61
PAM17	YKR065C	TY2B-DR1	Q12472	1770 aa		11.26	□□□□□ -0.61
PAM17	YKR065C	TY2B-OR2	Q12501	1770 aa		11.26	□□□□□ -0.61
PAM17	YKR065C	DAL1	P32375	460 aa		11.25	□□□□□ -0.61
PAM17	YKR065C	SIS2	P36024	562 aa		11.25	□□□□□ -0.61
PAM17	YKR065C	SLX8	P40072	274 aa		11.25	□□□□□ -0.61
PAM17	YKR065C	YIR007W	P40566	764 aa		11.25	□□□□□ -0.61
PAM17	YKR065C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	11.25	□□□□□ -0.61	not detected
PAM17	YKR065C	PAN1	P32521	1480 aa		11.25	□□□□□ -0.61
PAM17	YKR065C	MSN5	P52918	1224 aa		11.24	□□□□□ -0.61
PAM17	YKR065C	PEP12	P32854	288 aa		11.23	□□□□□ -0.61
PAM17	YKR065C	YFL034W	P43564	1073 aa		11.23	□□□□□ -0.61
PAM17	YKR065C	MMS22	Q06164	1454 aa		11.22	□□□□□ -0.61
PAM17	YKR065C	ROG3	P43602	733 aa		11.21	□□□□□ -0.61
PAM17	YKR065C	CDC19	P00549	500 aa	Known RBP	11.2	□□□□□ -0.62
PAM17	YKR065C	SSN3	P39073	555 aa		11.2	□□□□□ -0.62
PAM17	YKR065C	AIM9	P40053	627 aa	Known RBP	11.2	□□□□□ -0.62
PAM17	YKR065C	SUM1	P46676	1062 aa		11.2	□□□□□ -0.62
PAM17	YKR065C	TY1A-MR1	Q04215	440 aa		11.19	□□□□□ -0.62
PAM17	YKR065C	MYO4	P32492	1471 aa		11.18	□□□□□ -0.62
PAM17	YKR065C	UTP7	P40055	554 aa	Known RBP	11.17	□□□□□ -0.62
PAM17	YKR065C	SPP41	P38904	1435 aa		11.16	□□□□□ -0.62
PAM17	YKR065C	MET5	P47169	1442 aa		11.16	□□□□□ -0.62
PAM17	YKR065C	TSC13	Q99190	310 aa		11.15	□□□□□ -0.62
PAM17	YKR065C	TY1B-BR	Q12193	1756 aa		11.15	□□□□□ -0.62
PAM17	YKR065C	TY1B-GR3	Q12316	1755 aa		11.15	□□□□□ -0.62
PAM17	YKR065C	TY1B-OR	Q92393	1755 aa		11.15	□□□□□ -0.62
PAM17	YKR065C	SWI5	P08153	709 aa		11.14	□□□□□ -0.63
PAM17	YKR065C	AHP1	P38013	176 aa	Known RBP	11.14	□□□□□ -0.63
PAM17	YKR065C	TY2B-B	Q12491	1770 aa		11.13	□□□□□ -0.63
PAM17	YKR065C	TY1B-DR3	Q99231	1755 aa		11.13	□□□□□ -0.63
PAM17	YKR065C	TRM732	Q03496	1420 aa		11.13	□□□□□ -0.63
PAM17	YKR065C	SLA1	P32790	1244 aa		11.13	□□□□□ -0.63
PAM17	YKR065C	UBP15	P50101	1230 aa		11.13	□□□□□ -0.63
PAM17	YKR065C	ALA1	P40825	983 aa	Known RBP	11.12	□□□□□ -0.63
PAM17	YKR065C	YGR035C	P53222	116 aa		11.11	□□□□□ -0.63
PAM17	YKR065C	NAM8	Q00539	523 aa	Known RBP	11.11	□□□□□ -0.63
PAM17	YKR065C	CCP1	P00431	361 aa		11.1	□□□□□ -0.63
PAM17	YKR065C	RPS6A	P0CX37	236 aa	Known RBP	11.1	□□□□□ -0.63
PAM17	YKR065C	RPS6B	P0CX38	236 aa	Predicted RBP	11.1	□□□□□ -0.63
PAM17	YKR065C	TY1A-DR3	Q12441	440 aa		11.1	□□□□□ -0.63
PAM17	YKR065C	TY1B-H	O13535	1793 aa		11.1	□□□□□ -0.63
PAM17	YKR065C	TY1B-DR5	P0C2I2	1755 aa		11.1	□□□□□ -0.63
PAM17	YKR065C	TY1B-DR6	P0C2I3	1755 aa		11.1	□□□□□ -0.63
PAM17	YKR065C	TY1B-LR2	P0C2I5	1755 aa		11.1	□□□□□ -0.63
PAM17	YKR065C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	11.1	□□□□□ -0.63
PAM17	YKR065C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	11.1	□□□□□ -0.63
PAM17	YKR065C	TY1B-PR2	P0C2J0	1756 aa		11.1	□□□□□ -0.63
PAM17	YKR065C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	11.1	□□□□□ -0.63
PAM17	YKR065C	TY1B-JR1	P47098	1755 aa		11.1	□□□□□ -0.63
PAM17	YKR065C	TY1B-ML2	Q03434	1755 aa	Known RBP	11.1	□□□□□ -0.63
PAM17	YKR065C	TY1B-ER1	Q03612	1755 aa		11.1	□□□□□ -0.63
PAM17	YKR065C	TY1B-ML1	Q04711	1755 aa	Known RBP	11.1	□□□□□ -0.63
PAM17	YKR065C	TY1B-GR2	Q12269	1755 aa		11.1	□□□□□ -0.63
PAM17	YKR065C	TY1B-OL	Q12273	1755 aa		11.1	□□□□□ -0.63
PAM17	YKR065C	TY1B-PL	Q12414	1755 aa	Known RBP	11.1	□□□□□ -0.63
PAM17	YKR065C	TSC11	P40061	1430 aa		11.09	□□□□□ -0.63
PAM17	YKR065C	ESC1	Q03661	1658 aa	Known RBP	11.09	□□□□□ -0.63
PAM17	YKR065C	PDI1	P17967	522 aa	Known RBP	11.09	□□□□□ -0.63
PAM17	YKR065C	NTH2	P35172	780 aa		11.09	□□□□□ -0.63
PAM17	YKR065C	JJJ2	P46997	583 aa		11.09	□□□□□ -0.63
PAM17	YKR065C	TAF7	Q05021	590 aa		11.09	□□□□□ -0.63
PAM17	YKR065C	YPQ2	Q06328	317 aa		11.09	□□□□□ -0.63
PAM17	YKR065C	DNF1	P32660	1571 aa		11.08	□□□□□ -0.64

Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms