RNA–Protein interactions for RNA: YKL145W

RPT1, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT1, Length 1,404 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT1YKL145W YPR109WQ06104 294 aa7.17□□□□□ -1.26
RPT1YKL145W MLP1Q02455 1875 aaKnown RBP7.16□□□□□ -1.26
RPT1YKL145W ATE1P16639 503 aa7.16□□□□□ -1.26
RPT1YKL145W FKH1P40466 484 aa7.16□□□□□ -1.26
RPT1YKL145W CSC1Q06538 782 aa7.16□□□□□ -1.26
RPT1YKL145W GYP5Q12344 894 aa7.16□□□□□ -1.26
RPT1YKL145W TY4B-HP0C2J7 1802 aa7.15□□□□□ -1.26
RPT1YKL145W TY4B-JP47024 1803 aa7.15□□□□□ -1.26
RPT1YKL145W FAR11P53917 953 aa7.15□□□□□ -1.27
RPT1YKL145W ECM23Q02710 187 aa7.15□□□□□ -1.27
RPT1YKL145W FPR4Q06205 392 aaPredicted RBP7.15□□□□□ -1.27
RPT1YKL145W TOP1P04786 769 aa7.14□□□□□ -1.27
RPT1YKL145W TRL1P09880 827 aaKnown RBP7.14□□□□□ -1.27
RPT1YKL145W YPP1P46951 817 aa7.14□□□□□ -1.27
RPT1YKL145W TPS3P38426 1054 aaKnown RBP7.13□□□□□ -1.27
RPT1YKL145W YHL050CP38721 697 aa7.13□□□□□ -1.27
RPT1YKL145W YHR219WP38900 624 aa7.13□□□□□ -1.27
RPT1YKL145W POL32P47110 350 aa7.13□□□□□ -1.27
RPT1YKL145W SVF1Q05515 481 aa7.13□□□□□ -1.27
RPT1YKL145W LAM6Q08001 693 aa7.13□□□□□ -1.27
RPT1YKL145W YEL077CQ3E7X8 1277 aa7.13□□□□□ -1.27
RPT1YKL145W AI4P03878 556 aa7.12□□□□□ -1.27
RPT1YKL145W LEU2P04173 364 aaPredicted RBP7.12□□□□□ -1.27
RPT1YKL145W MPH3P0CE00 602 aa7.12□□□□□ -1.27
RPT1YKL145W NNF1P47149 201 aa7.12□□□□□ -1.27
RPT1YKL145W ADE6P38972 1358 aaKnown RBP7.12□□□□□ -1.27
RPT1YKL145W PPX1P38698 397 aa7.11□□□□□ -1.27
RPT1YKL145W MDJ2P42834 146 aa7.11□□□□□ -1.27
RPT1YKL145W MTR4P47047 1073 aaKnown RBP7.11□□□□□ -1.27
RPT1YKL145W NAF1P53919 492 aaKnown RBP7.11□□□□□ -1.27
RPT1YKL145W MCM16Q12262 181 aa7.11□□□□□ -1.27
RPT1YKL145W WHI5Q12416 295 aa7.11□□□□□ -1.27
RPT1YKL145W GAL2P13181 574 aa7.1□□□□□ -1.27
RPT1YKL145W KTR7P40504 517 aa7.1□□□□□ -1.27
RPT1YKL145W CWC15Q03772 175 aaKnown RBP7.1□□□□□ -1.27
RPT1YKL145W KAR5Q04746 504 aa7.1□□□□□ -1.27
RPT1YKL145W TFB4Q12004 338 aa7.1□□□□□ -1.27
RPT1YKL145W RPS24AP0CX31 135 aaKnown RBP7.1□□□□□ -1.27
RPT1YKL145W RPS24BP0CX32 135 aaKnown RBP7.1□□□□□ -1.27
RPT1YKL145W UBX7P38349 436 aa7.1□□□□□ -1.27
RPT1YKL145W RRP5Q05022 1729 aaKnown RBP7.09□□□□□ -1.27
RPT1YKL145W GRS1P38088 690 aaKnown RBP7.09□□□□□ -1.28
RPT1YKL145W YAF9P53930 226 aa7.09□□□□□ -1.28
RPT1YKL145W STB3Q12427 513 aa7.09□□□□□ -1.28
RPT1YKL145W YEF3P16521 1044 aaKnown RBP7.08□□□□□ -1.28
RPT1YKL145W PDI1P17967 522 aaKnown RBP7.08□□□□□ -1.28
RPT1YKL145W SLI15P38283 698 aa7.08□□□□□ -1.28
RPT1YKL145W NMD2P38798 1089 aaKnown RBP7.08□□□□□ -1.28
RPT1YKL145W RPP1BP10622 106 aaKnown RBP7.07□□□□□ -1.28
RPT1YKL145W TRK1P12685 1235 aa7.07□□□□□ -1.28
RPT1YKL145W SLY41P22215 453 aa7.07□□□□□ -1.28
RPT1YKL145W PRP45P28004 379 aaPredicted RBP7.07□□□□□ -1.28
RPT1YKL145W DCW1P36091 449 aa7.07□□□□□ -1.28
RPT1YKL145W CST6P40535 587 aa7.07□□□□□ -1.28
RPT1YKL145W AUS1Q08409 1394 aa7.06□□□□□ -1.28
RPT1YKL145W ENP1P38333 483 aaKnown RBP7.06□□□□□ -1.28
RPT1YKL145W PRP43P53131 767 aaKnown RBP7.06□□□□□ -1.28
RPT1YKL145W OYE2Q03558 400 aaKnown RBP7.06□□□□□ -1.28
RPT1YKL145W YIL177CP40434 1758 aa7.06□□□□□ -1.28
RPT1YKL145W YJL225CP40889 1758 aa7.06□□□□□ -1.28
RPT1YKL145W SEC8P32855 1065 aa7.05□□□□□ -1.28
RPT1YKL145W RTF1P53064 558 aa7.05□□□□□ -1.28
RPT1YKL145W ATG1P53104 897 aa7.05□□□□□ -1.28
RPT1YKL145W HIM1Q06674 414 aa7.05□□□□□ -1.28
RPT1YKL145W GAS4Q08271 471 aa7.05□□□□□ -1.28
RPT1YKL145W YRF1-2P40105 1681 aa7.04□□□□□ -1.28
RPT1YKL145W DPS1P04802 557 aaKnown RBP7.04□□□□□ -1.28
RPT1YKL145W TRM1P15565 570 aaKnown RBP7.04□□□□□ -1.28
RPT1YKL145W KAR2P16474 682 aaKnown RBP7.04□□□□□ -1.28
RPT1YKL145W PRP5P21372 849 aaPredicted RBP7.04□□□□□ -1.28
RPT1YKL145W MAG2Q06436 670 aaKnown RBP7.04□□□□□ -1.28
RPT1YKL145W CDC73Q06697 393 aa7.04□□□□□ -1.28
RPT1YKL145W BOL3P39724 118 aa7.03□□□□□ -1.28
RPT1YKL145W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.03□□□□□ -1.28not detected
RPT1YKL145W ATG36P46983 293 aa7.03□□□□□ -1.28
RPT1YKL145W YJR107WP47145 328 aa7.03□□□□□ -1.28
RPT1YKL145W APP1P53933 587 aa7.03□□□□□ -1.28
RPT1YKL145W TAP42Q04372 366 aa7.03□□□□□ -1.28
RPT1YKL145W PUF6Q04373 656 aaKnown RBP7.03□□□□□ -1.28
RPT1YKL145W SNF2P22082 1703 aa7.03□□□□□ -1.28
RPT1YKL145W MSB3P48566 633 aaPredicted RBP7.02□□□□□ -1.29
RPT1YKL145W YNL115CP53925 644 aa7.02□□□□□ -1.29
RPT1YKL145W TUM1Q08686 304 aaKnown RBP7.02□□□□□ -1.29
RPT1YKL145W YOL098CQ12496 1037 aa7.02□□□□□ -1.29
RPT1YKL145W GRX4P32642 244 aa7.01□□□□□ -1.29
RPT1YKL145W NUT2Q06213 157 aa7.01□□□□□ -1.29
RPT1YKL145W JIP5Q06214 492 aaPredicted RBP7.01□□□□□ -1.29
RPT1YKL145W HTA1P04911 132 aaKnown RBP7.01□□□□□ -1.29
RPT1YKL145W HTA2P04912 132 aa7.01□□□□□ -1.29
RPT1YKL145W ISF1P32488 338 aa7.01□□□□□ -1.29
RPT1YKL145W TIF4632P39936 914 aaKnown RBP7.01□□□□□ -1.29
RPT1YKL145W DAN4P47179 1161 aa7.01□□□□□ -1.29
RPT1YKL145W PAP2P53632 584 aaKnown RBP7.01□□□□□ -1.29
RPT1YKL145W ENT1Q12518 454 aa7.01□□□□□ -1.29
RPT1YKL145W FKS3Q04952 1785 aa7.01□□□□□ -1.29
RPT1YKL145W URB1P34241 1764 aaKnown RBP7□□□□□ -1.29
RPT1YKL145W PHO87P25360 923 aa7□□□□□ -1.29
RPT1YKL145W PEX21P50091 288 aa7□□□□□ -1.29
RPT1YKL145W PNP1Q05788 311 aa7□□□□□ -1.29
RPT1YKL145W YOL036WQ08206 761 aa7□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms