RNA–Protein interactions for RNA: YKL145W

RPT1, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT1, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT1YKL145W YPR109WQ06104 294 aa7.17□□□□□ -1.26
RPT1YKL145W MLP1Q02455 1875 aaKnown RBP7.16□□□□□ -1.26
RPT1YKL145W ATE1P16639 503 aa7.16□□□□□ -1.26
RPT1YKL145W FKH1P40466 484 aa7.16□□□□□ -1.26
RPT1YKL145W CSC1Q06538 782 aa7.16□□□□□ -1.26
RPT1YKL145W GYP5Q12344 894 aa7.16□□□□□ -1.26
RPT1YKL145W TY4B-HP0C2J7 1802 aa7.15□□□□□ -1.26
RPT1YKL145W TY4B-JP47024 1803 aa7.15□□□□□ -1.26
RPT1YKL145W FAR11P53917 953 aa7.15□□□□□ -1.27
RPT1YKL145W ECM23Q02710 187 aa7.15□□□□□ -1.27
RPT1YKL145W FPR4Q06205 392 aaPredicted RBP7.15□□□□□ -1.27
RPT1YKL145W TOP1P04786 769 aa7.14□□□□□ -1.27
RPT1YKL145W TRL1P09880 827 aaKnown RBP7.14□□□□□ -1.27
RPT1YKL145W YPP1P46951 817 aa7.14□□□□□ -1.27
RPT1YKL145W TPS3P38426 1054 aaKnown RBP7.13□□□□□ -1.27
RPT1YKL145W YHL050CP38721 697 aa7.13□□□□□ -1.27
RPT1YKL145W YHR219WP38900 624 aa7.13□□□□□ -1.27
RPT1YKL145W POL32P47110 350 aa7.13□□□□□ -1.27
RPT1YKL145W SVF1Q05515 481 aa7.13□□□□□ -1.27
RPT1YKL145W LAM6Q08001 693 aa7.13□□□□□ -1.27
RPT1YKL145W YEL077CQ3E7X8 1277 aa7.13□□□□□ -1.27
RPT1YKL145W AI4P03878 556 aa7.12□□□□□ -1.27
RPT1YKL145W LEU2P04173 364 aaPredicted RBP7.12□□□□□ -1.27
RPT1YKL145W MPH3P0CE00 602 aa7.12□□□□□ -1.27
RPT1YKL145W NNF1P47149 201 aa7.12□□□□□ -1.27
RPT1YKL145W ADE6P38972 1358 aaKnown RBP7.12□□□□□ -1.27
RPT1YKL145W PPX1P38698 397 aa7.11□□□□□ -1.27
RPT1YKL145W MDJ2P42834 146 aa7.11□□□□□ -1.27
RPT1YKL145W MTR4P47047 1073 aaKnown RBP7.11□□□□□ -1.27
RPT1YKL145W NAF1P53919 492 aaKnown RBP7.11□□□□□ -1.27
RPT1YKL145W MCM16Q12262 181 aa7.11□□□□□ -1.27
RPT1YKL145W WHI5Q12416 295 aa7.11□□□□□ -1.27
RPT1YKL145W GAL2P13181 574 aa7.1□□□□□ -1.27
RPT1YKL145W KTR7P40504 517 aa7.1□□□□□ -1.27
RPT1YKL145W CWC15Q03772 175 aaKnown RBP7.1□□□□□ -1.27
RPT1YKL145W KAR5Q04746 504 aa7.1□□□□□ -1.27
RPT1YKL145W TFB4Q12004 338 aa7.1□□□□□ -1.27
RPT1YKL145W RPS24AP0CX31 135 aaKnown RBP7.1□□□□□ -1.27
RPT1YKL145W RPS24BP0CX32 135 aaKnown RBP7.1□□□□□ -1.27
RPT1YKL145W UBX7P38349 436 aa7.1□□□□□ -1.27
RPT1YKL145W RRP5Q05022 1729 aaKnown RBP7.09□□□□□ -1.27
RPT1YKL145W GRS1P38088 690 aaKnown RBP7.09□□□□□ -1.28
RPT1YKL145W YAF9P53930 226 aa7.09□□□□□ -1.28
RPT1YKL145W STB3Q12427 513 aa7.09□□□□□ -1.28
RPT1YKL145W YEF3P16521 1044 aaKnown RBP7.08□□□□□ -1.28
RPT1YKL145W PDI1P17967 522 aaKnown RBP7.08□□□□□ -1.28
RPT1YKL145W SLI15P38283 698 aa7.08□□□□□ -1.28
RPT1YKL145W NMD2P38798 1089 aaKnown RBP7.08□□□□□ -1.28
RPT1YKL145W RPP1BP10622 106 aaKnown RBP7.07□□□□□ -1.28
RPT1YKL145W TRK1P12685 1235 aa7.07□□□□□ -1.28
RPT1YKL145W SLY41P22215 453 aa7.07□□□□□ -1.28
RPT1YKL145W PRP45P28004 379 aaPredicted RBP7.07□□□□□ -1.28
RPT1YKL145W DCW1P36091 449 aa7.07□□□□□ -1.28
RPT1YKL145W CST6P40535 587 aa7.07□□□□□ -1.28
RPT1YKL145W AUS1Q08409 1394 aa7.06□□□□□ -1.28
RPT1YKL145W ENP1P38333 483 aaKnown RBP7.06□□□□□ -1.28
RPT1YKL145W PRP43P53131 767 aaKnown RBP7.06□□□□□ -1.28
RPT1YKL145W OYE2Q03558 400 aaKnown RBP7.06□□□□□ -1.28
RPT1YKL145W YIL177CP40434 1758 aa7.06□□□□□ -1.28
RPT1YKL145W YJL225CP40889 1758 aa7.06□□□□□ -1.28
RPT1YKL145W SEC8P32855 1065 aa7.05□□□□□ -1.28
RPT1YKL145W RTF1P53064 558 aa7.05□□□□□ -1.28
RPT1YKL145W ATG1P53104 897 aa7.05□□□□□ -1.28
RPT1YKL145W HIM1Q06674 414 aa7.05□□□□□ -1.28
RPT1YKL145W GAS4Q08271 471 aa7.05□□□□□ -1.28
RPT1YKL145W YRF1-2P40105 1681 aa7.04□□□□□ -1.28
RPT1YKL145W DPS1P04802 557 aaKnown RBP7.04□□□□□ -1.28
RPT1YKL145W TRM1P15565 570 aaKnown RBP7.04□□□□□ -1.28
RPT1YKL145W KAR2P16474 682 aaKnown RBP7.04□□□□□ -1.28
RPT1YKL145W PRP5P21372 849 aaPredicted RBP7.04□□□□□ -1.28
RPT1YKL145W MAG2Q06436 670 aaKnown RBP7.04□□□□□ -1.28
RPT1YKL145W CDC73Q06697 393 aa7.04□□□□□ -1.28
RPT1YKL145W BOL3P39724 118 aa7.03□□□□□ -1.28
RPT1YKL145W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.03□□□□□ -1.28not detected
RPT1YKL145W ATG36P46983 293 aa7.03□□□□□ -1.28
RPT1YKL145W YJR107WP47145 328 aa7.03□□□□□ -1.28
RPT1YKL145W APP1P53933 587 aa7.03□□□□□ -1.28
RPT1YKL145W TAP42Q04372 366 aa7.03□□□□□ -1.28
RPT1YKL145W PUF6Q04373 656 aaKnown RBP7.03□□□□□ -1.28
RPT1YKL145W SNF2P22082 1703 aa7.03□□□□□ -1.28
RPT1YKL145W MSB3P48566 633 aaPredicted RBP7.02□□□□□ -1.29
RPT1YKL145W YNL115CP53925 644 aa7.02□□□□□ -1.29
RPT1YKL145W TUM1Q08686 304 aaKnown RBP7.02□□□□□ -1.29
RPT1YKL145W YOL098CQ12496 1037 aa7.02□□□□□ -1.29
RPT1YKL145W GRX4P32642 244 aa7.01□□□□□ -1.29
RPT1YKL145W NUT2Q06213 157 aa7.01□□□□□ -1.29
RPT1YKL145W JIP5Q06214 492 aaPredicted RBP7.01□□□□□ -1.29
RPT1YKL145W HTA1P04911 132 aaKnown RBP7.01□□□□□ -1.29
RPT1YKL145W HTA2P04912 132 aa7.01□□□□□ -1.29
RPT1YKL145W ISF1P32488 338 aa7.01□□□□□ -1.29
RPT1YKL145W TIF4632P39936 914 aaKnown RBP7.01□□□□□ -1.29
RPT1YKL145W DAN4P47179 1161 aa7.01□□□□□ -1.29
RPT1YKL145W PAP2P53632 584 aaKnown RBP7.01□□□□□ -1.29
RPT1YKL145W ENT1Q12518 454 aa7.01□□□□□ -1.29
RPT1YKL145W FKS3Q04952 1785 aa7.01□□□□□ -1.29
RPT1YKL145W URB1P34241 1764 aaKnown RBP7□□□□□ -1.29
RPT1YKL145W PHO87P25360 923 aa7□□□□□ -1.29
RPT1YKL145W PEX21P50091 288 aa7□□□□□ -1.29
RPT1YKL145W PNP1Q05788 311 aa7□□□□□ -1.29
RPT1YKL145W YOL036WQ08206 761 aa7□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms