RNA–Protein interactions for RNA: YKL062W

MSN4, Transcript of Stress-responsive transcriptional activator, yeastyeast

Gene MSN4, Length 1,893 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN4YKL062W ROM1P53046 1155 aa6.13□□□□□ -1.43
MSN4YKL062W YLR346CQ06139 101 aa6.12□□□□□ -1.43
MSN4YKL062W SSA1P10591 642 aaKnown RBP6.11□□□□□ -1.43
MSN4YKL062W SUM1P46676 1062 aa6.11□□□□□ -1.43
MSN4YKL062W YJR098CP47139 656 aa6.11□□□□□ -1.43
MSN4YKL062W CYT1P07143 309 aa6.1□□□□□ -1.43
MSN4YKL062W MET22P32179 357 aa6.1□□□□□ -1.43
MSN4YKL062W OPT2Q06593 877 aa6.1□□□□□ -1.43
MSN4YKL062W VAN1P23642 535 aa6.09□□□□□ -1.44
MSN4YKL062W SSN3P39073 555 aa6.09□□□□□ -1.44
MSN4YKL062W UBP2Q01476 1272 aa6.09□□□□□ -1.44
MSN4YKL062W YDR444WQ04093 687 aa6.09□□□□□ -1.44
MSN4YKL062W AIM44Q99299 758 aa6.09□□□□□ -1.44
MSN4YKL062W ALA1P40825 983 aaKnown RBP6.08□□□□□ -1.44
MSN4YKL062W RPL34AP87262 121 aaPredicted RBP6.08□□□□□ -1.44
MSN4YKL062W TCB1Q12466 1186 aa6.08□□□□□ -1.44
MSN4YKL062W MSN5P52918 1224 aa6.07□□□□□ -1.44
MSN4YKL062W LCB5Q06147 687 aaKnown RBP6.07□□□□□ -1.44
MSN4YKL062W DAL1P32375 460 aa6.07□□□□□ -1.44
MSN4YKL062W VTC4P47075 721 aa6.07□□□□□ -1.44
MSN4YKL062W PUF6Q04373 656 aaKnown RBP6.07□□□□□ -1.44
MSN4YKL062W YPQ2Q06328 317 aa6.07□□□□□ -1.44
MSN4YKL062W UBP1P25037 809 aa6.06□□□□□ -1.44
MSN4YKL062W GLY1P37303 387 aaKnown RBP6.05□□□□□ -1.44
MSN4YKL062W TRS33Q99394 268 aa6.05□□□□□ -1.44
MSN4YKL062W NGR1P32831 672 aaKnown RBP6.05□□□□□ -1.44
MSN4YKL062W GEF1P37020 779 aa6.05□□□□□ -1.44
MSN4YKL062W MCM1P11746 286 aa6.04□□□□□ -1.44
MSN4YKL062W SCW11P53189 542 aa6.04□□□□□ -1.44
MSN4YKL062W GAR1P28007 205 aaKnown RBP6.03□□□□□ -1.44
MSN4YKL062W AHP1P38013 176 aaKnown RBP6.03□□□□□ -1.44
MSN4YKL062W CWH41P53008 833 aa6.03□□□□□ -1.44
MSN4YKL062W ORC1P54784 914 aaPredicted RBP6.03□□□□□ -1.44
MSN4YKL062W CWC15Q03772 175 aaKnown RBP6.03□□□□□ -1.44
MSN4YKL062W PUN1Q06991 263 aa6.03□□□□□ -1.44
MSN4YKL062W TY1A-BLQ12266 440 aa6.03□□□□□ -1.44
MSN4YKL062W SLA1P32790 1244 aa6.02□□□□□ -1.44
MSN4YKL062W OSH7P38755 437 aa6.02□□□□□ -1.44
MSN4YKL062W JJJ2P46997 583 aa6.02□□□□□ -1.44
MSN4YKL062W SUV3P32580 737 aa6.01□□□□□ -1.45
MSN4YKL062W TY1A-DR3Q12441 440 aa6.01□□□□□ -1.45
MSN4YKL062W SRS2P12954 1174 aa6□□□□□ -1.45
MSN4YKL062W IRE1P32361 1115 aa6□□□□□ -1.45
MSN4YKL062W ALD4P46367 519 aaKnown RBP6□□□□□ -1.45
MSN4YKL062W Q0182Q9ZZW1 134 aa6□□□□□ -1.45
MSN4YKL062W CDC19P00549 500 aaKnown RBP5.99□□□□□ -1.45
MSN4YKL062W SHM1P37292 490 aaPredicted RBP5.99□□□□□ -1.45
MSN4YKL062W TPS3P38426 1054 aaKnown RBP5.98□□□□□ -1.45
MSN4YKL062W YNL165WP53891 406 aa5.98□□□□□ -1.45
MSN4YKL062W PNP1Q05788 311 aa5.98□□□□□ -1.45
MSN4YKL062W UBP15P50101 1230 aa5.98□□□□□ -1.45
MSN4YKL062W URN1Q06525 465 aaKnown RBP5.98□□□□□ -1.45
MSN4YKL062W RPS31P05759 152 aaKnown RBP5.97□□□□□ -1.45
MSN4YKL062W GBP2P25555 427 aaKnown RBP RIP-Chip data5.97□□□□□ -1.45not detected
MSN4YKL062W CDC3P32457 520 aaKnown RBP5.97□□□□□ -1.45
MSN4YKL062W SCD5P34758 872 aa5.97□□□□□ -1.45
MSN4YKL062W HXT5P38695 592 aa5.97□□□□□ -1.45
MSN4YKL062W ACO2P39533 789 aa5.96□□□□□ -1.45
MSN4YKL062W MLF3P32047 452 aa5.96□□□□□ -1.46
MSN4YKL062W YBR197CP38306 217 aa5.96□□□□□ -1.46
MSN4YKL062W RGA1P39083 1007 aa5.96□□□□□ -1.46
MSN4YKL062W CAB1Q04430 367 aa5.96□□□□□ -1.46
MSN4YKL062W PDC6P26263 563 aaKnown RBP5.95□□□□□ -1.46
MSN4YKL062W YTA6P40328 754 aa5.95□□□□□ -1.46
MSN4YKL062W CAF120P53836 1060 aa5.95□□□□□ -1.46
MSN4YKL062W FOX2Q02207 900 aaKnown RBP5.95□□□□□ -1.46
MSN4YKL062W UTP4Q06679 776 aaKnown RBP5.95□□□□□ -1.46
MSN4YKL062W YIR007WP40566 764 aa5.94□□□□□ -1.46
MSN4YKL062W ROG3P43602 733 aa5.94□□□□□ -1.46
MSN4YKL062W NAM8Q00539 523 aaKnown RBP5.94□□□□□ -1.46
MSN4YKL062W TY1A-MR1Q04215 440 aa5.94□□□□□ -1.46
MSN4YKL062W RGA2Q06407 1009 aa5.94□□□□□ -1.46
MSN4YKL062W PSH1Q12161 406 aa5.94□□□□□ -1.46
MSN4YKL062W RRN6P32786 894 aa5.94□□□□□ -1.46
MSN4YKL062W FUR4P05316 633 aaKnown RBP5.93□□□□□ -1.46
MSN4YKL062W ISC10P32645 267 aa5.93□□□□□ -1.46
MSN4YKL062W KAR5Q04746 504 aa5.92□□□□□ -1.46
MSN4YKL062W YDL176WQ12027 708 aa5.92□□□□□ -1.46
MSN4YKL062W MRPL33P20084 86 aa5.92□□□□□ -1.46
MSN4YKL062W LEU1P07264 779 aaKnown RBP5.91□□□□□ -1.46
MSN4YKL062W BOL3P39724 118 aa5.91□□□□□ -1.46
MSN4YKL062W ALD2P47771 506 aa5.9□□□□□ -1.46
MSN4YKL062W MTO1P53070 669 aa5.9□□□□□ -1.46
MSN4YKL062W VMA3P25515 160 aa5.9□□□□□ -1.47
MSN4YKL062W HAT1Q12341 374 aa5.9□□□□□ -1.47
MSN4YKL062W CCP1P00431 361 aa5.89□□□□□ -1.47
MSN4YKL062W KAP122P32767 1081 aa5.89□□□□□ -1.47
MSN4YKL062W MRPL16P38064 232 aa5.89□□□□□ -1.47
MSN4YKL062W CUZ1P53899 274 aa5.89□□□□□ -1.47
MSN4YKL062W LSO1Q3E827 93 aa5.89□□□□□ -1.47
MSN4YKL062W DIT1P21623 536 aa5.88□□□□□ -1.47
MSN4YKL062W QDR2P40474 542 aa5.88□□□□□ -1.47
MSN4YKL062W YMR265CQ03508 461 aaKnown RBP5.88□□□□□ -1.47
MSN4YKL062W YML020WQ03722 664 aa5.88□□□□□ -1.47
MSN4YKL062W STB3Q12427 513 aa5.88□□□□□ -1.47
MSN4YKL062W RGP1P16664 663 aa5.87□□□□□ -1.47
MSN4YKL062W BOI1P38041 980 aaKnown RBP5.87□□□□□ -1.47
MSN4YKL062W LDH1P38139 375 aa5.87□□□□□ -1.47
MSN4YKL062W DYS1P38791 387 aa5.86□□□□□ -1.47
MSN4YKL062W SPR3P41901 512 aa5.86□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms