RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C ALA1P40825 983 aaKnown RBP4.08□□□□□ -1.76
VPS55YJR044C GLT1Q12680 2145 aaKnown RBP4.08□□□□□ -1.76
VPS55YJR044C YDJ1P25491 409 aaKnown RBP4.07□□□□□ -1.76
VPS55YJR044C SHM1P37292 490 aaPredicted RBP4.07□□□□□ -1.76
VPS55YJR044C SLN1P39928 1220 aaPredicted RBP4.07□□□□□ -1.76
VPS55YJR044C GPM1P00950 247 aaKnown RBP4.06□□□□□ -1.76
VPS55YJR044C TBS1P38114 1094 aa4.06□□□□□ -1.76
VPS55YJR044C SUM1P46676 1062 aa4.06□□□□□ -1.76
VPS55YJR044C JJJ2P46997 583 aa4.06□□□□□ -1.76
VPS55YJR044C FPS1P23900 669 aa4.05□□□□□ -1.76
VPS55YJR044C IRE1P32361 1115 aa4.05□□□□□ -1.76
VPS55YJR044C MCX1P38323 520 aaPredicted RBP4.05□□□□□ -1.76
VPS55YJR044C GUA1P38625 525 aaKnown RBP4.05□□□□□ -1.76
VPS55YJR044C BOI2P39969 1040 aa4.05□□□□□ -1.76
VPS55YJR044C MCA1Q08601 432 aa4.05□□□□□ -1.76
VPS55YJR044C YDR215CQ12240 137 aa4.05□□□□□ -1.76
VPS55YJR044C MRPL16P38064 232 aa4.04□□□□□ -1.76
VPS55YJR044C SOH1P38633 127 aa4.04□□□□□ -1.76
VPS55YJR044C SLX8P40072 274 aa4.04□□□□□ -1.76
VPS55YJR044C MRX12P47084 519 aa4.04□□□□□ -1.76
VPS55YJR044C PSH1Q12161 406 aa4.04□□□□□ -1.76
VPS55YJR044C PDC6P26263 563 aaKnown RBP4.03□□□□□ -1.76
VPS55YJR044C CSE4P36012 229 aa4.03□□□□□ -1.76
VPS55YJR044C YBL036CP38197 257 aa4.03□□□□□ -1.76
VPS55YJR044C AMN1P38285 549 aaPredicted RBP4.03□□□□□ -1.76
VPS55YJR044C HDA3Q06623 655 aa4.03□□□□□ -1.76
VPS55YJR044C STB3Q12427 513 aa4.03□□□□□ -1.76
VPS55YJR044C RPS31P05759 152 aaKnown RBP4□□□□□ -1.77
VPS55YJR044C PDC5P16467 563 aaKnown RBP4□□□□□ -1.77
VPS55YJR044C SPT5P27692 1063 aaKnown RBP4□□□□□ -1.77
VPS55YJR044C BIO2P32451 375 aa3.99□□□□□ -1.77
VPS55YJR044C LSB6P42951 607 aa3.99□□□□□ -1.77
VPS55YJR044C PRY1P47032 299 aa3.99□□□□□ -1.77
VPS55YJR044C TY1A-DR2Q03964 440 aaKnown RBP3.99□□□□□ -1.77
VPS55YJR044C CBC2Q08920 208 aaKnown RBP RIP-Chip data3.99□□□□□ -1.77not detected
VPS55YJR044C PKC1P24583 1151 aa3.98□□□□□ -1.77
VPS55YJR044C TAT1P38085 619 aa3.98□□□□□ -1.77
VPS55YJR044C SPR3P41901 512 aa3.98□□□□□ -1.77
VPS55YJR044C KNS1P32350 737 aaPredicted RBP3.97□□□□□ -1.77
VPS55YJR044C MET1P36150 593 aa3.97□□□□□ -1.77
VPS55YJR044C YNL108CP53929 270 aa3.97□□□□□ -1.77
VPS55YJR044C ENO2P00925 437 aaKnown RBP3.96□□□□□ -1.78
VPS55YJR044C SWI5P08153 709 aa3.96□□□□□ -1.78
VPS55YJR044C YNL165WP53891 406 aa3.96□□□□□ -1.78
VPS55YJR044C TFB3Q03290 321 aa3.96□□□□□ -1.78
VPS55YJR044C YPQ2Q06328 317 aa3.96□□□□□ -1.78
VPS55YJR044C MSC7P38694 644 aa3.95□□□□□ -1.78
VPS55YJR044C ATG3P40344 310 aa3.95□□□□□ -1.78
VPS55YJR044C ALD2P47771 506 aa3.95□□□□□ -1.78
VPS55YJR044C HPC2Q01448 625 aa3.95□□□□□ -1.78
VPS55YJR044C UTP13Q05946 817 aaKnown RBP3.95□□□□□ -1.78
VPS55YJR044C MAC1P35192 417 aa3.94□□□□□ -1.78
VPS55YJR044C LEU1P07264 779 aaKnown RBP3.93□□□□□ -1.78
VPS55YJR044C SUP45P12385 437 aaKnown RBP3.93□□□□□ -1.78
VPS55YJR044C BRL1P38770 471 aa3.93□□□□□ -1.78
VPS55YJR044C AIM9P40053 627 aaKnown RBP3.93□□□□□ -1.78
VPS55YJR044C ALO1P54783 526 aaKnown RBP3.93□□□□□ -1.78
VPS55YJR044C YPL034WQ03083 165 aa3.93□□□□□ -1.78
VPS55YJR044C RPS6AP0CX37 236 aaKnown RBP3.92□□□□□ -1.78
VPS55YJR044C RPS6BP0CX38 236 aaPredicted RBP3.92□□□□□ -1.78
VPS55YJR044C RDS2P19541 446 aaKnown RBP3.92□□□□□ -1.78
VPS55YJR044C YPP1P46951 817 aa3.92□□□□□ -1.78
VPS55YJR044C RGP1P16664 663 aa3.91□□□□□ -1.78
VPS55YJR044C MLF3P32047 452 aa3.91□□□□□ -1.78
VPS55YJR044C NTH2P35172 780 aa3.9□□□□□ -1.79
VPS55YJR044C RIM21P48565 533 aa3.9□□□□□ -1.79
VPS55YJR044C PGM2P37012 569 aaKnown RBP3.89□□□□□ -1.79
VPS55YJR044C ALG14P38242 237 aa3.89□□□□□ -1.79
VPS55YJR044C YTA6P40328 754 aa3.89□□□□□ -1.79
VPS55YJR044C TPS3P38426 1054 aaKnown RBP3.88□□□□□ -1.79
VPS55YJR044C GAS5Q08193 484 aa3.88□□□□□ -1.79
VPS55YJR044C Q0182Q9ZZW1 134 aa3.88□□□□□ -1.79
VPS55YJR044C LEU3P08638 886 aa3.87□□□□□ -1.79
VPS55YJR044C PDI1P17967 522 aaKnown RBP3.87□□□□□ -1.79
VPS55YJR044C OMA1P36163 345 aa3.87□□□□□ -1.79
VPS55YJR044C RPN1P38764 993 aaKnown RBP3.87□□□□□ -1.79
VPS55YJR044C PRK1P40494 810 aa3.87□□□□□ -1.79
VPS55YJR044C BUD9P53226 547 aa3.87□□□□□ -1.79
VPS55YJR044C NHA1Q99271 985 aa3.87□□□□□ -1.79
VPS55YJR044C MCM1P11746 286 aa3.86□□□□□ -1.79
VPS55YJR044C MTO1P53070 669 aa3.86□□□□□ -1.79
VPS55YJR044C NAR1P23503 491 aaKnown RBP3.85□□□□□ -1.79
VPS55YJR044C YJL007CP47080 104 aa3.85□□□□□ -1.79
VPS55YJR044C INP52P50942 1183 aa3.85□□□□□ -1.79
VPS55YJR044C ENO1P00924 437 aaKnown RBP3.84□□□□□ -1.79
VPS55YJR044C YFL034WP43564 1073 aa3.84□□□□□ -1.79
VPS55YJR044C RPP1AP05318 106 aaPredicted RBP3.83□□□□□ -1.8
VPS55YJR044C CYT1P07143 309 aa3.83□□□□□ -1.8
VPS55YJR044C HEH2Q03281 663 aa3.83□□□□□ -1.8
VPS55YJR044C GIS4Q04233 774 aa3.83□□□□□ -1.8
VPS55YJR044C MRX10Q05648 414 aa3.82□□□□□ -1.8
VPS55YJR044C MRP10O75012 95 aa3.81□□□□□ -1.8
VPS55YJR044C AI3P03877 415 aa3.81□□□□□ -1.8
VPS55YJR044C RRM3P38766 723 aa3.81□□□□□ -1.8
VPS55YJR044C YNR040WP53736 256 aa3.81□□□□□ -1.8
VPS55YJR044C TSC13Q99190 310 aa3.81□□□□□ -1.8
VPS55YJR044C NCL1P38205 684 aaKnown RBP3.8□□□□□ -1.8
VPS55YJR044C KTR7P40504 517 aa3.8□□□□□ -1.8
VPS55YJR044C IRC24P40580 263 aa3.8□□□□□ -1.8
VPS55YJR044C CUS1Q02554 436 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms