RNA–Protein interactions for RNA: YJL087C

TRL1, Transcript of tRNA ligase, yeast

Gene TRL1, Length 2,484 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRL1	YJL087C	SSF2	Q12153	453 aa	Predicted RBP	2.68	□□□□□ -1.98
TRL1	YJL087C	MCM2	P29469	868 aa		2.67	□□□□□ -1.98
TRL1	YJL087C	DAK2	P43550	591 aa		2.67	□□□□□ -1.98
TRL1	YJL087C	YJL049W	P47048	450 aa		2.67	□□□□□ -1.98
TRL1	YJL087C	STE20	Q03497	939 aa	Known RBP	2.67	□□□□□ -1.98
TRL1	YJL087C	GAS4	Q08271	471 aa		2.67	□□□□□ -1.98
TRL1	YJL087C	YRR1	Q12172	810 aa		2.67	□□□□□ -1.98
TRL1	YJL087C	KEX2	P13134	814 aa		2.67	□□□□□ -1.98
TRL1	YJL087C	STI1	P15705	589 aa	Known RBP RIP-Chip data	2.67	□□□□□ -1.98	not detected
TRL1	YJL087C	BOI1	P38041	980 aa	Known RBP	2.67	□□□□□ -1.98
TRL1	YJL087C	FIG4	P42837	879 aa		2.67	□□□□□ -1.98
TRL1	YJL087C	MTO1	P53070	669 aa		2.67	□□□□□ -1.98
TRL1	YJL087C	TUB4	P53378	473 aa		2.67	□□□□□ -1.98
TRL1	YJL087C	VPS72	Q03388	795 aa		2.67	□□□□□ -1.98
TRL1	YJL087C	RMD1	Q03441	430 aa		2.67	□□□□□ -1.98
TRL1	YJL087C	SAS4	Q04003	481 aa		2.67	□□□□□ -1.98
TRL1	YJL087C	TRS120	Q04183	1289 aa		2.67	□□□□□ -1.98
TRL1	YJL087C	PDI1	P17967	522 aa	Known RBP	2.66	□□□□□ -1.98
TRL1	YJL087C	SOH1	P38633	127 aa		2.66	□□□□□ -1.98
TRL1	YJL087C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	2.66	□□□□□ -1.98	RIP-Chip
TRL1	YJL087C	SSB1	P11484	613 aa	Known RBP	2.66	□□□□□ -1.98
TRL1	YJL087C	PDR1	P12383	1068 aa		2.66	□□□□□ -1.98
TRL1	YJL087C	VAN1	P23642	535 aa		2.66	□□□□□ -1.98
TRL1	YJL087C	GUT2	P32191	649 aa		2.66	□□□□□ -1.98
TRL1	YJL087C	SPT16	P32558	1035 aa	Known RBP	2.66	□□□□□ -1.98
TRL1	YJL087C	RPT1	P33299	467 aa	Known RBP	2.66	□□□□□ -1.98
TRL1	YJL087C	VRP1	P37370	817 aa		2.66	□□□□□ -1.98
TRL1	YJL087C	SSB2	P40150	613 aa	Known RBP	2.66	□□□□□ -1.98
TRL1	YJL087C	ATG3	P40344	310 aa		2.66	□□□□□ -1.98
TRL1	YJL087C	MAD1	P40957	749 aa		2.66	□□□□□ -1.98
TRL1	YJL087C	AGE1	Q04412	482 aa		2.66	□□□□□ -1.98
TRL1	YJL087C	BDF2	Q07442	638 aa		2.66	□□□□□ -1.98
TRL1	YJL087C	WRS1	Q12109	432 aa	Known RBP	2.66	□□□□□ -1.98
TRL1	YJL087C	TEC1	P18412	486 aa		2.65	□□□□□ -1.98
TRL1	YJL087C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	2.65	□□□□□ -1.98	not detected
TRL1	YJL087C	PMC1	P38929	1173 aa	Predicted RBP	2.65	□□□□□ -1.98
TRL1	YJL087C	RTT106	P40161	455 aa		2.65	□□□□□ -1.98
TRL1	YJL087C	TBF1	Q02457	562 aa		2.65	□□□□□ -1.98
TRL1	YJL087C	BUD21	Q08492	214 aa	Predicted RBP	2.65	□□□□□ -1.98
TRL1	YJL087C	SPT2	P06843	333 aa	Predicted RBP	2.65	□□□□□ -1.99
TRL1	YJL087C	GCD11	P32481	527 aa	Known RBP	2.65	□□□□□ -1.99
TRL1	YJL087C	RPA14	P50106	137 aa		2.65	□□□□□ -1.99
TRL1	YJL087C	POB3	Q04636	552 aa	Known RBP	2.65	□□□□□ -1.99
TRL1	YJL087C	YPR097W	Q06839	1073 aa		2.65	□□□□□ -1.99
TRL1	YJL087C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	2.65	□□□□□ -1.99	not detected
TRL1	YJL087C	APC11	Q12157	165 aa		2.65	□□□□□ -1.99
TRL1	YJL087C	YDL206W	Q12424	762 aa		2.65	□□□□□ -1.99
TRL1	YJL087C	CLN2	P20438	545 aa		2.64	□□□□□ -1.99
TRL1	YJL087C	GRX1	P25373	110 aa	Known RBP	2.64	□□□□□ -1.99
TRL1	YJL087C	NUD1	P32336	851 aa		2.64	□□□□□ -1.99
TRL1	YJL087C	MNR2	P35724	969 aa		2.64	□□□□□ -1.99
TRL1	YJL087C	HAL5	P38970	855 aa	Known RBP	2.64	□□□□□ -1.99
TRL1	YJL087C	RPS26A	P39938	119 aa	Known RBP	2.64	□□□□□ -1.99
TRL1	YJL087C	RPS26B	P39939	119 aa	Known RBP	2.64	□□□□□ -1.99
TRL1	YJL087C	YML082W	Q04533	649 aa	Known RBP	2.64	□□□□□ -1.99
TRL1	YJL087C	PPM2	Q08282	695 aa		2.64	□□□□□ -1.99
TRL1	YJL087C	CYC8	P14922	966 aa		2.64	□□□□□ -1.99
TRL1	YJL087C	UBP1	P25037	809 aa		2.64	□□□□□ -1.99
TRL1	YJL087C	NGR1	P32831	672 aa	Known RBP	2.64	□□□□□ -1.99
TRL1	YJL087C	YBR197C	P38306	217 aa		2.64	□□□□□ -1.99
TRL1	YJL087C	ENP1	P38333	483 aa	Known RBP	2.64	□□□□□ -1.99
TRL1	YJL087C	MNN1	P39106	762 aa		2.64	□□□□□ -1.99
TRL1	YJL087C	UBP12	P39538	1254 aa		2.64	□□□□□ -1.99
TRL1	YJL087C	SPR3	P41901	512 aa		2.64	□□□□□ -1.99
TRL1	YJL087C	YGL081W	P53156	320 aa		2.64	□□□□□ -1.99
TRL1	YJL087C	TOS4	Q06266	489 aa		2.64	□□□□□ -1.99
TRL1	YJL087C	ESF1	Q06344	628 aa	Known RBP	2.64	□□□□□ -1.99
TRL1	YJL087C	CDC53	Q12018	815 aa	Known RBP	2.64	□□□□□ -1.99
TRL1	YJL087C	GIN4	Q12263	1142 aa		2.64	□□□□□ -1.99
TRL1	YJL087C	TRS33	Q99394	268 aa		2.64	□□□□□ -1.99
TRL1	YJL087C	VPS35	P34110	944 aa		2.63	□□□□□ -1.99
TRL1	YJL087C	TPM2	P40414	161 aa		2.63	□□□□□ -1.99
TRL1	YJL087C	NOP2	P40991	618 aa	Known RBP	2.63	□□□□□ -1.99
TRL1	YJL087C	YGR122W	P53272	402 aa		2.63	□□□□□ -1.99
TRL1	YJL087C	MET6	P05694	767 aa	Known RBP	2.63	□□□□□ -1.99
TRL1	YJL087C	PRT1	P06103	763 aa	Known RBP	2.63	□□□□□ -1.99
TRL1	YJL087C	SEC2	P17065	759 aa		2.63	□□□□□ -1.99
TRL1	YJL087C	KTR2	P33550	425 aa		2.63	□□□□□ -1.99
TRL1	YJL087C	XDJ1	P39102	459 aa		2.63	□□□□□ -1.99
TRL1	YJL087C	YJR142W	P47173	342 aa		2.63	□□□□□ -1.99
TRL1	YJL087C	HUL5	P53119	910 aa		2.63	□□□□□ -1.99
TRL1	YJL087C	YOL057W	Q08225	711 aa		2.63	□□□□□ -1.99
TRL1	YJL087C	PEP7	P32609	515 aa		2.62	□□□□□ -1.99
TRL1	YJL087C	IXR1	P33417	597 aa		2.62	□□□□□ -1.99
TRL1	YJL087C	NTH2	P35172	780 aa		2.62	□□□□□ -1.99
TRL1	YJL087C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	2.62	□□□□□ -1.99	not detected
TRL1	YJL087C	AIM9	P40053	627 aa	Known RBP	2.62	□□□□□ -1.99
TRL1	YJL087C	NUP82	P40368	713 aa		2.62	□□□□□ -1.99
TRL1	YJL087C	YNL011C	P53980	444 aa		2.62	□□□□□ -1.99
TRL1	YJL087C	UTP14	Q04500	899 aa	Known RBP	2.62	□□□□□ -1.99
TRL1	YJL087C	HDA3	Q06623	655 aa		2.62	□□□□□ -1.99
TRL1	YJL087C	YOR131C	Q12486	218 aa		2.62	□□□□□ -1.99
TRL1	YJL087C	HXK1	P04806	485 aa	Known RBP	2.62	□□□□□ -1.99
TRL1	YJL087C	RAD2	P07276	1031 aa		2.62	□□□□□ -1.99
TRL1	YJL087C	GCD6	P32501	712 aa	Known RBP	2.62	□□□□□ -1.99
TRL1	YJL087C	YFL034W	P43564	1073 aa		2.62	□□□□□ -1.99
TRL1	YJL087C	ZDS1	P50111	915 aa	Known RBP	2.62	□□□□□ -1.99
TRL1	YJL087C	YGR053C	P53234	283 aa		2.62	□□□□□ -1.99
TRL1	YJL087C	UFD2	P54860	961 aa		2.62	□□□□□ -1.99
TRL1	YJL087C	RAM1	P22007	431 aa		2.61	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms