RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP82	YJL061W	CDC3	P32457	520 aa	Known RBP	3.99	□□□□□ -1.77
NUP82	YJL061W	BRE2	P43132	505 aa		3.99	□□□□□ -1.77
NUP82	YJL061W	SRC1	Q03707	834 aa		3.99	□□□□□ -1.77
NUP82	YJL061W	UBP1	P25037	809 aa		3.98	□□□□□ -1.77
NUP82	YJL061W	CWH41	P53008	833 aa		3.98	□□□□□ -1.77
NUP82	YJL061W	NUP85	P46673	744 aa		3.98	□□□□□ -1.77
NUP82	YJL061W	SUM1	P46676	1062 aa		3.97	□□□□□ -1.77
NUP82	YJL061W	UTP7	P40055	554 aa	Known RBP	3.97	□□□□□ -1.77
NUP82	YJL061W	LSC2	P53312	427 aa		3.97	□□□□□ -1.77
NUP82	YJL061W	CWC15	Q03772	175 aa	Known RBP	3.97	□□□□□ -1.77
NUP82	YJL061W	PUN1	Q06991	263 aa		3.97	□□□□□ -1.77
NUP82	YJL061W	MCM1	P11746	286 aa		3.96	□□□□□ -1.78
NUP82	YJL061W	SRS2	P12954	1174 aa		3.96	□□□□□ -1.78
NUP82	YJL061W	NGR1	P32831	672 aa	Known RBP	3.95	□□□□□ -1.78
NUP82	YJL061W	ALA1	P40825	983 aa	Known RBP	3.95	□□□□□ -1.78
NUP82	YJL061W	DLD1	P32891	587 aa		3.95	□□□□□ -1.78
NUP82	YJL061W	YLR346C	Q06139	101 aa		3.95	□□□□□ -1.78
NUP82	YJL061W	YPQ2	Q06328	317 aa		3.95	□□□□□ -1.78
NUP82	YJL061W	YJR098C	P47139	656 aa		3.94	□□□□□ -1.78
NUP82	YJL061W	MSN5	P52918	1224 aa		3.94	□□□□□ -1.78
NUP82	YJL061W	PNP1	Q05788	311 aa		3.94	□□□□□ -1.78
NUP82	YJL061W	AHP1	P38013	176 aa	Known RBP	3.94	□□□□□ -1.78
NUP82	YJL061W	ALD4	P46367	519 aa	Known RBP	3.94	□□□□□ -1.78
NUP82	YJL061W	VTC4	P47075	721 aa		3.94	□□□□□ -1.78
NUP82	YJL061W	SSN3	P39073	555 aa		3.93	□□□□□ -1.78
NUP82	YJL061W	SUV3	P32580	737 aa		3.92	□□□□□ -1.78
NUP82	YJL061W	RRN6	P32786	894 aa		3.92	□□□□□ -1.78
NUP82	YJL061W	SCD5	P34758	872 aa		3.92	□□□□□ -1.78
NUP82	YJL061W	TPS3	P38426	1054 aa	Known RBP	3.92	□□□□□ -1.78
NUP82	YJL061W	UBP2	Q01476	1272 aa		3.92	□□□□□ -1.78
NUP82	YJL061W	KAR5	Q04746	504 aa		3.92	□□□□□ -1.78
NUP82	YJL061W	FUR4	P05316	633 aa	Known RBP	3.92	□□□□□ -1.78
NUP82	YJL061W	DAL1	P32375	460 aa		3.92	□□□□□ -1.78
NUP82	YJL061W	HAT1	Q12341	374 aa		3.92	□□□□□ -1.78
NUP82	YJL061W	TCB1	Q12466	1186 aa		3.92	□□□□□ -1.78
NUP82	YJL061W	JJJ2	P46997	583 aa		3.91	□□□□□ -1.78
NUP82	YJL061W	YTA6	P40328	754 aa		3.91	□□□□□ -1.78
NUP82	YJL061W	FOX2	Q02207	900 aa	Known RBP	3.91	□□□□□ -1.78
NUP82	YJL061W	OPT2	Q06593	877 aa		3.91	□□□□□ -1.78
NUP82	YJL061W	GLY1	P37303	387 aa	Known RBP	3.9	□□□□□ -1.79
NUP82	YJL061W	HXT5	P38695	592 aa		3.9	□□□□□ -1.79
NUP82	YJL061W	SSF1	P38789	453 aa	Predicted RBP	3.9	□□□□□ -1.79
NUP82	YJL061W	YML020W	Q03722	664 aa		3.9	□□□□□ -1.79
NUP82	YJL061W	CAB1	Q04430	367 aa		3.9	□□□□□ -1.79
NUP82	YJL061W	UTP4	Q06679	776 aa	Known RBP	3.9	□□□□□ -1.79
NUP82	YJL061W	IRE1	P32361	1115 aa		3.89	□□□□□ -1.79
NUP82	YJL061W	YBR197C	P38306	217 aa		3.89	□□□□□ -1.79
NUP82	YJL061W	BOL3	P39724	118 aa		3.89	□□□□□ -1.79
NUP82	YJL061W	SCW11	P53189	542 aa		3.89	□□□□□ -1.79
NUP82	YJL061W	Q0182	Q9ZZW1	134 aa		3.89	□□□□□ -1.79
NUP82	YJL061W	ISC10	P32645	267 aa		3.89	□□□□□ -1.79
NUP82	YJL061W	SLA1	P32790	1244 aa		3.89	□□□□□ -1.79
NUP82	YJL061W	LCB5	Q06147	687 aa	Known RBP	3.89	□□□□□ -1.79
NUP82	YJL061W	YBL113C	Q7M4S9	792 aa		3.89	□□□□□ -1.79
NUP82	YJL061W	MLF3	P32047	452 aa		3.88	□□□□□ -1.79
NUP82	YJL061W	MET22	P32179	357 aa		3.88	□□□□□ -1.79
NUP82	YJL061W	SLD2	P34252	453 aa		3.88	□□□□□ -1.79
NUP82	YJL061W	RGA1	P39083	1007 aa		3.88	□□□□□ -1.79
NUP82	YJL061W	UBP15	P50101	1230 aa		3.88	□□□□□ -1.79
NUP82	YJL061W	ATG1	P53104	897 aa		3.88	□□□□□ -1.79
NUP82	YJL061W	YDR444W	Q04093	687 aa		3.88	□□□□□ -1.79
NUP82	YJL061W	LSO1	Q3E827	93 aa		3.88	□□□□□ -1.79
NUP82	YJL061W	MRPL33	P20084	86 aa		3.88	□□□□□ -1.79
NUP82	YJL061W	SHM1	P37292	490 aa	Predicted RBP	3.88	□□□□□ -1.79
NUP82	YJL061W	TY1A-DR3	Q12441	440 aa		3.88	□□□□□ -1.79
NUP82	YJL061W	CDC19	P00549	500 aa	Known RBP	3.87	□□□□□ -1.79
NUP82	YJL061W	GLO3	P38682	493 aa	Known RBP	3.87	□□□□□ -1.79
NUP82	YJL061W	ERP5	P38819	212 aa		3.87	□□□□□ -1.79
NUP82	YJL061W	YNL165W	P53891	406 aa		3.87	□□□□□ -1.79
NUP82	YJL061W	NOP8	Q08287	484 aa	Predicted RBP	3.87	□□□□□ -1.79
NUP82	YJL061W	OSH7	P38755	437 aa		3.86	□□□□□ -1.79
NUP82	YJL061W	TY1A-BL	Q12266	440 aa		3.86	□□□□□ -1.79
NUP82	YJL061W	RPS31	P05759	152 aa	Known RBP	3.86	□□□□□ -1.79
NUP82	YJL061W	PDC6	P26263	563 aa	Known RBP	3.86	□□□□□ -1.79
NUP82	YJL061W	GRS1	P38088	690 aa	Known RBP	3.86	□□□□□ -1.79
NUP82	YJL061W	STM1	P39015	273 aa	Known RBP	3.86	□□□□□ -1.79
NUP82	YJL061W	QDR1	P40475	563 aa		3.86	□□□□□ -1.79
NUP82	YJL061W	SPR3	P41901	512 aa		3.86	□□□□□ -1.79
NUP82	YJL061W	ACF4	P47129	309 aa		3.86	□□□□□ -1.79
NUP82	YJL061W	PSH1	Q12161	406 aa		3.86	□□□□□ -1.79
NUP82	YJL061W	TRL1	P09880	827 aa	Known RBP	3.85	□□□□□ -1.79
NUP82	YJL061W	VMA3	P25515	160 aa		3.85	□□□□□ -1.79
NUP82	YJL061W	DYS1	P38791	387 aa		3.85	□□□□□ -1.79
NUP82	YJL061W	LEU1	P07264	779 aa	Known RBP	3.85	□□□□□ -1.79
NUP82	YJL061W	KAP122	P32767	1081 aa		3.85	□□□□□ -1.79
NUP82	YJL061W	BOI1	P38041	980 aa	Known RBP	3.85	□□□□□ -1.79
NUP82	YJL061W	LDH1	P38139	375 aa		3.85	□□□□□ -1.79
NUP82	YJL061W	QDR2	P40474	542 aa		3.85	□□□□□ -1.79
NUP82	YJL061W	MTO1	P53070	669 aa		3.85	□□□□□ -1.79
NUP82	YJL061W	APC11	Q12157	165 aa		3.85	□□□□□ -1.79
NUP82	YJL061W	RPP1A	P05318	106 aa	Predicted RBP	3.84	□□□□□ -1.79
NUP82	YJL061W	SEC20	P28791	383 aa		3.83	□□□□□ -1.8
NUP82	YJL061W	MDJ2	P42834	146 aa		3.83	□□□□□ -1.8
NUP82	YJL061W	ALD2	P47771	506 aa		3.83	□□□□□ -1.8
NUP82	YJL061W	SUT1	P53032	299 aa	Known RBP	3.83	□□□□□ -1.8
NUP82	YJL061W	GAR1	P28007	205 aa	Known RBP	3.83	□□□□□ -1.8
NUP82	YJL061W	YBR287W	P38355	427 aa		3.83	□□□□□ -1.8
NUP82	YJL061W	HXT8	P40886	569 aa		3.83	□□□□□ -1.8
NUP82	YJL061W	RGP1	P16664	663 aa		3.82	□□□□□ -1.8
NUP82	YJL061W	RPB10	P22139	70 aa		3.82	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 67.3 ms