RNA–Protein interactions for RNA: YJL041W

NSP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NSP1, Length 2,472 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSP1	YJL041W	TRM732	Q03496	1420 aa		4.13	□□□□□ -1.75
NSP1	YJL041W	YML133C	Q03099	1374 aa		4.12	□□□□□ -1.75
NSP1	YJL041W	YLL067C	Q07888	1374 aa		4.12	□□□□□ -1.75
NSP1	YJL041W	YLL066C	Q99208	1374 aa		4.12	□□□□□ -1.75
NSP1	YJL041W	TTI1	P36097	1038 aa		4.12	□□□□□ -1.75
NSP1	YJL041W	RPL34A	P87262	121 aa	Predicted RBP	4.12	□□□□□ -1.75
NSP1	YJL041W	ERF2	Q06551	359 aa		4.12	□□□□□ -1.75
NSP1	YJL041W	NHA1	Q99271	985 aa		4.12	□□□□□ -1.75
NSP1	YJL041W	SAP190	P36123	1033 aa		4.11	□□□□□ -1.75
NSP1	YJL041W	SLX8	P40072	274 aa		4.11	□□□□□ -1.75
NSP1	YJL041W	PEA2	P40091	420 aa		4.11	□□□□□ -1.75
NSP1	YJL041W	KAR3	P17119	729 aa		4.11	□□□□□ -1.75
NSP1	YJL041W	PET100	P38958	111 aa		4.11	□□□□□ -1.75
NSP1	YJL041W	HOS4	P40480	1083 aa		4.11	□□□□□ -1.75
NSP1	YJL041W	VID30	P53076	958 aa		4.11	□□□□□ -1.75
NSP1	YJL041W	COG8	Q04632	607 aa		4.11	□□□□□ -1.75
NSP1	YJL041W	ERV41	Q04651	352 aa		4.11	□□□□□ -1.75
NSP1	YJL041W	GIN4	Q12263	1142 aa		4.11	□□□□□ -1.75
NSP1	YJL041W	SLD2	P34252	453 aa		4.1	□□□□□ -1.75
NSP1	YJL041W	KEX2	P13134	814 aa		4.1	□□□□□ -1.75
NSP1	YJL041W	TRM1	P15565	570 aa	Known RBP	4.1	□□□□□ -1.75
NSP1	YJL041W	NPR3	P38742	1146 aa		4.1	□□□□□ -1.75
NSP1	YJL041W	ATG3	P40344	310 aa		4.1	□□□□□ -1.75
NSP1	YJL041W	YGL081W	P53156	320 aa		4.1	□□□□□ -1.75
NSP1	YJL041W	ERG12	P07277	443 aa		4.09	□□□□□ -1.75
NSP1	YJL041W	THR4	P16120	514 aa	Known RBP	4.09	□□□□□ -1.75
NSP1	YJL041W	GCD11	P32481	527 aa	Known RBP	4.09	□□□□□ -1.75
NSP1	YJL041W	MRX12	P47084	519 aa		4.09	□□□□□ -1.75
NSP1	YJL041W	RNT1	Q02555	471 aa		4.09	□□□□□ -1.75
NSP1	YJL041W	AGE1	Q04412	482 aa		4.09	□□□□□ -1.75
NSP1	YJL041W	LSP1	Q12230	341 aa	Known RBP	4.09	□□□□□ -1.75
NSP1	YJL041W	PAT1	P25644	796 aa	Known RBP	4.09	□□□□□ -1.76
NSP1	YJL041W	CPS1	P27614	576 aa		4.09	□□□□□ -1.76
NSP1	YJL041W	CST6	P40535	587 aa		4.09	□□□□□ -1.76
NSP1	YJL041W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.76	RIP-Chip
NSP1	YJL041W	HSL1	P34244	1518 aa		4.08	□□□□□ -1.76
NSP1	YJL041W	TY4B-P	A0A0B7P3V8	1104 aa		4.08	□□□□□ -1.76
NSP1	YJL041W	RPP0	P05317	312 aa	Known RBP	4.08	□□□□□ -1.76
NSP1	YJL041W	RPC31	P17890	251 aa		4.08	□□□□□ -1.76
NSP1	YJL041W	MRF1	P30775	413 aa	Predicted RBP	4.08	□□□□□ -1.76
NSP1	YJL041W	SIC1	P38634	284 aa		4.08	□□□□□ -1.76
NSP1	YJL041W	RIO2	P40160	425 aa	Known RBP	4.08	□□□□□ -1.76
NSP1	YJL041W	PXR1	P53335	271 aa	Predicted RBP	4.08	□□□□□ -1.76
NSP1	YJL041W	YML020W	Q03722	664 aa		4.08	□□□□□ -1.76
NSP1	YJL041W	MLP2	P40457	1679 aa		4.08	□□□□□ -1.76
NSP1	YJL041W	ENO2	P00925	437 aa	Known RBP	4.07	□□□□□ -1.76
NSP1	YJL041W	CDC3	P32457	520 aa	Known RBP	4.07	□□□□□ -1.76
NSP1	YJL041W	RIM21	P48565	533 aa		4.07	□□□□□ -1.76
NSP1	YJL041W	ALD3	P54114	506 aa		4.07	□□□□□ -1.76
NSP1	YJL041W	MRX10	Q05648	414 aa		4.07	□□□□□ -1.76
NSP1	YJL041W	YOR389W	Q08912	624 aa		4.07	□□□□□ -1.76
NSP1	YJL041W	SWR1	Q05471	1514 aa		4.07	□□□□□ -1.76
NSP1	YJL041W	ZUO1	P32527	433 aa	Known RBP	4.07	□□□□□ -1.76
NSP1	YJL041W	RPA14	P50106	137 aa		4.07	□□□□□ -1.76
NSP1	YJL041W	CTR9	P89105	1077 aa		4.07	□□□□□ -1.76
NSP1	YJL041W	YEL077C	Q3E7X8	1277 aa		4.07	□□□□□ -1.76
NSP1	YJL041W	ENO1	P00924	437 aa	Known RBP	4.06	□□□□□ -1.76
NSP1	YJL041W	RAD3	P06839	778 aa		4.06	□□□□□ -1.76
NSP1	YJL041W	YDJ1	P25491	409 aa	Known RBP	4.06	□□□□□ -1.76
NSP1	YJL041W	CIN4	P39110	191 aa		4.06	□□□□□ -1.76
NSP1	YJL041W	RRN7	P40992	514 aa		4.06	□□□□□ -1.76
NSP1	YJL041W	ALR1	Q08269	859 aa		4.06	□□□□□ -1.76
NSP1	YJL041W	SWI6	P09959	803 aa		4.06	□□□□□ -1.76
NSP1	YJL041W	ISW1	P38144	1129 aa		4.06	□□□□□ -1.76
NSP1	YJL041W	VPS60	Q03390	229 aa		4.06	□□□□□ -1.76
NSP1	YJL041W	RPN7	Q06103	429 aa	Known RBP	4.06	□□□□□ -1.76
NSP1	YJL041W	PDR5	P33302	1511 aa	Known RBP	4.06	□□□□□ -1.76
NSP1	YJL041W	TRM3	Q07527	1436 aa		4.06	□□□□□ -1.76
NSP1	YJL041W	VPS24	P36095	224 aa	Known RBP	4.05	□□□□□ -1.76
NSP1	YJL041W	BRN1	P38170	754 aa		4.05	□□□□□ -1.76
NSP1	YJL041W	PAC1	P39946	494 aa	Known RBP	4.05	□□□□□ -1.76
NSP1	YJL041W	CCM1	P48237	864 aa	Predicted RBP	4.05	□□□□□ -1.76
NSP1	YJL041W	ENV9	Q08651	330 aa		4.05	□□□□□ -1.76
NSP1	YJL041W	MOD5	P07884	428 aa		4.05	□□□□□ -1.76
NSP1	YJL041W	RAD51	P25454	400 aa		4.05	□□□□□ -1.76
NSP1	YJL041W	GUT2	P32191	649 aa		4.05	□□□□□ -1.76
NSP1	YJL041W	CLA4	P48562	842 aa		4.05	□□□□□ -1.76
NSP1	YJL041W	KXD1	P53158	218 aa		4.05	□□□□□ -1.76
NSP1	YJL041W	YNL247W	P53852	767 aa	Known RBP	4.05	□□□□□ -1.76
NSP1	YJL041W	YPR097W	Q06839	1073 aa		4.05	□□□□□ -1.76
NSP1	YJL041W	ETT1	Q08421	412 aa	Known RBP	4.05	□□□□□ -1.76
NSP1	YJL041W	YLL054C	Q12244	843 aa		4.05	□□□□□ -1.76
NSP1	YJL041W	MCM16	Q12262	181 aa		4.05	□□□□□ -1.76
NSP1	YJL041W	SEC39	Q12745	709 aa		4.05	□□□□□ -1.76
NSP1	YJL041W	SCC2	Q04002	1493 aa		4.05	□□□□□ -1.76
NSP1	YJL041W	MHP1	P43638	1398 aa		4.05	□□□□□ -1.76
NSP1	YJL041W	NDC80	P40460	691 aa		4.04	□□□□□ -1.76
NSP1	YJL041W	DSN1	P40568	576 aa		4.04	□□□□□ -1.76
NSP1	YJL041W	STU1	P38198	1513 aa		4.04	□□□□□ -1.76
NSP1	YJL041W	TGL4	P36165	910 aa		4.04	□□□□□ -1.76
NSP1	YJL041W	SLN1	P39928	1220 aa	Predicted RBP	4.04	□□□□□ -1.76
NSP1	YJL041W	TUB4	P53378	473 aa		4.04	□□□□□ -1.76
NSP1	YJL041W	STE20	Q03497	939 aa	Known RBP	4.04	□□□□□ -1.76
NSP1	YJL041W	GGA1	Q06336	557 aa		4.04	□□□□□ -1.76
NSP1	YJL041W	YDL206W	Q12424	762 aa		4.04	□□□□□ -1.76
NSP1	YJL041W	TEC1	P18412	486 aa		4.03	□□□□□ -1.76
NSP1	YJL041W	CLN1	P20437	546 aa		4.03	□□□□□ -1.76
NSP1	YJL041W	AIR1	P40507	360 aa	Known RBP	4.03	□□□□□ -1.76
NSP1	YJL041W	BDP1	P46678	594 aa		4.03	□□□□□ -1.76
NSP1	YJL041W	UTP13	Q05946	817 aa	Known RBP	4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms