RNA–Protein interactions for RNA: YHR026W

VMA16, Transcript of Subunit c'' of the vacuolar ATPase, yeastyeast

Gene VMA16, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA16YHR026W DMA2P53924 522 aa7.78□□□□□ -1.16
VMA16YHR026W PSK1P31374 1356 aa7.77□□□□□ -1.17
VMA16YHR026W ESS1P22696 170 aa7.77□□□□□ -1.17
VMA16YHR026W VRP1P37370 817 aa7.77□□□□□ -1.17
VMA16YHR026W URB1P34241 1764 aaKnown RBP7.76□□□□□ -1.17
VMA16YHR026W SLY41P22215 453 aa7.76□□□□□ -1.17
VMA16YHR026W PAF1P38351 445 aa7.76□□□□□ -1.17
VMA16YHR026W HST2P53686 357 aa7.76□□□□□ -1.17
VMA16YHR026W FOX2Q02207 900 aaKnown RBP7.76□□□□□ -1.17
VMA16YHR026W MMP1Q12372 583 aa7.76□□□□□ -1.17
VMA16YHR026W ROM2P51862 1356 aaKnown RBP7.75□□□□□ -1.17
VMA16YHR026W TY1A-DR4O74302 440 aa7.75□□□□□ -1.17
VMA16YHR026W TY1A-HP0C2I4 478 aaKnown RBP7.75□□□□□ -1.17
VMA16YHR026W TY1A-AP0CX57 440 aa7.75□□□□□ -1.17
VMA16YHR026W TY1A-PR1P0CX58 440 aa7.75□□□□□ -1.17
VMA16YHR026W TY1A-ORP0CX59 440 aa7.75□□□□□ -1.17
VMA16YHR026W TY1A-PR2P0CX60 440 aa7.75□□□□□ -1.17
VMA16YHR026W TY1A-DR5P0CX65 440 aa7.75□□□□□ -1.17
VMA16YHR026W TY1A-ER2P0CX66 440 aa7.75□□□□□ -1.17
VMA16YHR026W TY1A-GR3P0CX67 440 aa7.75□□□□□ -1.17
VMA16YHR026W TY1A-LR1P0CX68 440 aa7.75□□□□□ -1.17
VMA16YHR026W TY1A-MR2P0CX69 440 aa7.75□□□□□ -1.17
VMA16YHR026W TY1A-JR2P47099 440 aa7.75□□□□□ -1.17
VMA16YHR026W CTH1P47976 325 aa7.75□□□□□ -1.17
VMA16YHR026W MSB3P48566 633 aaPredicted RBP7.75□□□□□ -1.17
VMA16YHR026W TY1A-DR1Q03856 440 aa7.75□□□□□ -1.17
VMA16YHR026W TY1A-ML1Q04706 440 aaKnown RBP7.75□□□□□ -1.17
VMA16YHR026W TY1A-BRQ12217 440 aa7.75□□□□□ -1.17
VMA16YHR026W TY1A-NL2Q12470 440 aa7.75□□□□□ -1.17
VMA16YHR026W TY1A-GR2Q12485 440 aa7.75□□□□□ -1.17
VMA16YHR026W SEC2P17065 759 aa7.74□□□□□ -1.17
VMA16YHR026W YNL115CP53925 644 aa7.74□□□□□ -1.17
VMA16YHR026W YEF3P16521 1044 aaKnown RBP7.73□□□□□ -1.17
VMA16YHR026W NAP1P25293 417 aaKnown RBP7.73□□□□□ -1.17
VMA16YHR026W YJU3P28321 313 aa7.73□□□□□ -1.17
VMA16YHR026W RTC1Q08281 1341 aa7.73□□□□□ -1.17
VMA16YHR026W PRP40P33203 583 aaKnown RBP7.72□□□□□ -1.17
VMA16YHR026W PKH3Q03306 898 aaPredicted RBP7.72□□□□□ -1.17
VMA16YHR026W LAM6Q08001 693 aa7.72□□□□□ -1.17
VMA16YHR026W SSM4P40318 1319 aa7.72□□□□□ -1.17
VMA16YHR026W PRT1P06103 763 aaKnown RBP7.71□□□□□ -1.18
VMA16YHR026W BCK2P33306 851 aa7.71□□□□□ -1.18
VMA16YHR026W RCM1P53972 490 aa7.71□□□□□ -1.18
VMA16YHR026W GYP1Q08484 637 aa7.71□□□□□ -1.18
VMA16YHR026W RTF1P53064 558 aa7.7□□□□□ -1.18
VMA16YHR026W TFB3Q03290 321 aa7.7□□□□□ -1.18
VMA16YHR026W TCB1Q12466 1186 aa7.7□□□□□ -1.18
VMA16YHR026W TY4B-HP0C2J7 1802 aa7.69□□□□□ -1.18
VMA16YHR026W TY4B-JP47024 1803 aa7.69□□□□□ -1.18
VMA16YHR026W RSF2P46974 1380 aa7.68□□□□□ -1.18
VMA16YHR026W FKS3Q04952 1785 aa7.67□□□□□ -1.18
VMA16YHR026W RRN7P40992 514 aa7.67□□□□□ -1.18
VMA16YHR026W HPC2Q01448 625 aa7.67□□□□□ -1.18
VMA16YHR026W PKC1P24583 1151 aa7.66□□□□□ -1.18
VMA16YHR026W PPH3P32345 308 aa7.66□□□□□ -1.18
VMA16YHR026W TUB4P53378 473 aa7.66□□□□□ -1.18
VMA16YHR026W TAF8Q03750 510 aa7.66□□□□□ -1.18
VMA16YHR026W COBP00163 385 aa7.65□□□□□ -1.18
VMA16YHR026W ARG8P18544 423 aa7.65□□□□□ -1.18
VMA16YHR026W ADE6P38972 1358 aaKnown RBP7.65□□□□□ -1.18
VMA16YHR026W TRM1P15565 570 aaKnown RBP7.64□□□□□ -1.19
VMA16YHR026W YKL133CP36066 463 aa7.64□□□□□ -1.19
VMA16YHR026W BRL1P38770 471 aa7.64□□□□□ -1.19
VMA16YHR026W AGE1Q04412 482 aa7.64□□□□□ -1.19
VMA16YHR026W SLM3Q12093 417 aa7.64□□□□□ -1.19
VMA16YHR026W RAD59Q12223 238 aa7.64□□□□□ -1.19
VMA16YHR026W YKR075CP36155 307 aa7.63□□□□□ -1.19
VMA16YHR026W PAC1P39946 494 aaKnown RBP7.63□□□□□ -1.19
VMA16YHR026W SPT16P32558 1035 aaKnown RBP7.62□□□□□ -1.19
VMA16YHR026W PUS6P53294 404 aa7.62□□□□□ -1.19
VMA16YHR026W TBF1Q02457 562 aa7.62□□□□□ -1.19
VMA16YHR026W SPT7P35177 1332 aa7.61□□□□□ -1.19
VMA16YHR026W ENP1P38333 483 aaKnown RBP7.61□□□□□ -1.19
VMA16YHR026W ALD3P54114 506 aa7.61□□□□□ -1.19
VMA16YHR026W YRF1-3P0CX14 1859 aa7.6□□□□□ -1.19
VMA16YHR026W YRF1-7P0CX15 1859 aa7.6□□□□□ -1.19
VMA16YHR026W YRF1-6P53819 1859 aa7.6□□□□□ -1.19
VMA16YHR026W SAS4Q04003 481 aa7.6□□□□□ -1.19
VMA16YHR026W PAT1P25644 796 aaKnown RBP7.59□□□□□ -1.19
VMA16YHR026W RSC30P38781 883 aa7.59□□□□□ -1.19
VMA16YHR026W YDL206WQ12424 762 aa7.59□□□□□ -1.19
VMA16YHR026W YRF1-4O13559 1382 aa7.59□□□□□ -1.2
VMA16YHR026W SDH2P21801 266 aa7.58□□□□□ -1.2
VMA16YHR026W ESL2P36168 1195 aa7.58□□□□□ -1.2
VMA16YHR026W XDJ1P39102 459 aa7.58□□□□□ -1.2
VMA16YHR026W EAF6P47128 113 aa7.58□□□□□ -1.2
VMA16YHR026W HGH1P48362 394 aaKnown RBP7.57□□□□□ -1.2
VMA16YHR026W NOP7P53261 605 aaKnown RBP7.57□□□□□ -1.2
VMA16YHR026W YBL036CP38197 257 aa7.56□□□□□ -1.2
VMA16YHR026W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.56□□□□□ -1.2not detected
VMA16YHR026W XKS1P42826 600 aa7.56□□□□□ -1.2
VMA16YHR026W SSA4P22202 642 aaKnown RBP7.55□□□□□ -1.2
VMA16YHR026W YJL007CP47080 104 aa7.55□□□□□ -1.2
VMA16YHR026W SAP155P43612 1002 aa7.54□□□□□ -1.2
VMA16YHR026W SNF2P22082 1703 aa7.53□□□□□ -1.2
VMA16YHR026W CSE4P36012 229 aa7.53□□□□□ -1.2
VMA16YHR026W PRP43P53131 767 aaKnown RBP7.53□□□□□ -1.2
VMA16YHR026W PDC1P06169 563 aaKnown RBP7.52□□□□□ -1.21
VMA16YHR026W ERG12P07277 443 aa7.52□□□□□ -1.21
VMA16YHR026W MRF1P30775 413 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms