RNA–Protein interactions for RNA: YHL025W

SNF6, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF6, Length 999 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF6	YHL025W	YNG2	P38806	282 aa	Known RBP	13.87	□□□□□ -0.19
SNF6	YHL025W	ARG8	P18544	423 aa		13.86	□□□□□ -0.19
SNF6	YHL025W	APL2	P36000	726 aa	Predicted RBP	13.86	□□□□□ -0.19
SNF6	YHL025W	YLR271W	Q06152	274 aa		13.86	□□□□□ -0.19
SNF6	YHL025W	BOI2	P39969	1040 aa		13.85	□□□□□ -0.19
SNF6	YHL025W	NYV1	Q12255	253 aa		13.84	□□□□□ -0.19
SNF6	YHL025W	CWH41	P53008	833 aa		13.83	□□□□□ -0.2
SNF6	YHL025W	SPO1	P53541	631 aa		13.83	□□□□□ -0.2
SNF6	YHL025W	SQS1	P53866	767 aa	Known RBP	13.83	□□□□□ -0.2
SNF6	YHL025W	SWC3	P31376	625 aa		13.82	□□□□□ -0.2
SNF6	YHL025W	SER1	P33330	395 aa	Known RBP	13.82	□□□□□ -0.2
SNF6	YHL025W	SET1	P38827	1080 aa	Known RBP	13.81	□□□□□ -0.2
SNF6	YHL025W	ILV3	P39522	585 aa	Known RBP	13.81	□□□□□ -0.2
SNF6	YHL025W	HGH1	P48362	394 aa	Known RBP	13.81	□□□□□ -0.2
SNF6	YHL025W	YGL082W	P53155	381 aa		13.81	□□□□□ -0.2
SNF6	YHL025W	DCD1	P06773	312 aa		13.8	□□□□□ -0.2
SNF6	YHL025W	UTP10	P42945	1769 aa	Known RBP	13.79	□□□□□ -0.2
SNF6	YHL025W	SSA4	P22202	642 aa	Known RBP	13.79	□□□□□ -0.2
SNF6	YHL025W	GCD7	P32502	381 aa	Predicted RBP	13.79	□□□□□ -0.2
SNF6	YHL025W	PKH1	Q03407	766 aa		13.79	□□□□□ -0.2
SNF6	YHL025W	LPD1	P09624	499 aa	Known RBP	13.78	□□□□□ -0.2
SNF6	YHL025W	UBP12	P39538	1254 aa		13.77	□□□□□ -0.21
SNF6	YHL025W	PEX21	P50091	288 aa		13.76	□□□□□ -0.21
SNF6	YHL025W	CTI6	Q08923	506 aa		13.76	□□□□□ -0.21
SNF6	YHL025W	ECM16	Q04217	1267 aa	Known RBP	13.75	□□□□□ -0.21
SNF6	YHL025W	SSK22	P25390	1331 aa	Predicted RBP	13.74	□□□□□ -0.21
SNF6	YHL025W	NMD2	P38798	1089 aa	Known RBP	13.74	□□□□□ -0.21
SNF6	YHL025W	PFF1	P38244	976 aa		13.73	□□□□□ -0.21
SNF6	YHL025W	ITC1	P53125	1264 aa		13.73	□□□□□ -0.21
SNF6	YHL025W	FPK1	P53739	893 aa		13.72	□□□□□ -0.21
SNF6	YHL025W	RAT1	Q02792	1006 aa	Known RBP	13.72	□□□□□ -0.21
SNF6	YHL025W	FCP1	Q03254	732 aa		13.72	□□□□□ -0.21
SNF6	YHL025W	MTC5	Q03897	1148 aa		13.72	□□□□□ -0.21
SNF6	YHL025W	PUS5	Q06244	254 aa		13.72	□□□□□ -0.21
SNF6	YHL025W	SUP35	P05453	685 aa	Known RBP	13.71	□□□□□ -0.21
SNF6	YHL025W	RPC31	P17890	251 aa		13.71	□□□□□ -0.21
SNF6	YHL025W	PSH1	Q12161	406 aa		13.71	□□□□□ -0.21
SNF6	YHL025W	HAT1	Q12341	374 aa		13.71	□□□□□ -0.21
SNF6	YHL025W	SSF1	P38789	453 aa	Predicted RBP	13.7	□□□□□ -0.22
SNF6	YHL025W	SMY1	P32364	656 aa	Known RBP	13.69	□□□□□ -0.22
SNF6	YHL025W	SAC3	P46674	1301 aa		13.68	□□□□□ -0.22
SNF6	YHL025W	DIB1	Q06819	143 aa	Predicted RBP	13.68	□□□□□ -0.22
SNF6	YHL025W	NCB2	Q92317	146 aa		13.66	□□□□□ -0.22
SNF6	YHL025W	RFC1	P38630	861 aa	Known RBP	13.65	□□□□□ -0.22
SNF6	YHL025W	NKP2	Q06162	153 aa		13.65	□□□□□ -0.22
SNF6	YHL025W	ERO1	Q03103	563 aa		13.64	□□□□□ -0.23
SNF6	YHL025W	CDC16	P09798	840 aa		13.63	□□□□□ -0.23
SNF6	YHL025W	HXT10	P43581	546 aa		13.63	□□□□□ -0.23
SNF6	YHL025W	TOM1	Q03280	3268 aa		13.63	□□□□□ -0.23
SNF6	YHL025W	BDP1	P46678	594 aa		13.62	□□□□□ -0.23
SNF6	YHL025W	RAD50	P12753	1312 aa		13.62	□□□□□ -0.23
SNF6	YHL025W	TOP1	P04786	769 aa		13.61	□□□□□ -0.23
SNF6	YHL025W	RPS9B	P05755	195 aa	Known RBP	13.61	□□□□□ -0.23
SNF6	YHL025W	SLI15	P38283	698 aa		13.61	□□□□□ -0.23
SNF6	YHL025W	BDF2	Q07442	638 aa		13.61	□□□□□ -0.23
SNF6	YHL025W	SNU66	Q12420	587 aa	Predicted RBP	13.61	□□□□□ -0.23
SNF6	YHL025W	ATG20	Q07528	640 aa		13.59	□□□□□ -0.23
SNF6	YHL025W	ICL1	P28240	557 aa	Predicted RBP	13.58	□□□□□ -0.24
SNF6	YHL025W	IRC3	Q06683	689 aa		13.58	□□□□□ -0.24
SNF6	YHL025W	GYP5	Q12344	894 aa		13.58	□□□□□ -0.24
SNF6	YHL025W	SHC1	P39000	512 aa		13.57	□□□□□ -0.24
SNF6	YHL025W	SYF1	Q04048	859 aa	Predicted RBP	13.57	□□□□□ -0.24
SNF6	YHL025W	PMD1	P32634	1753 aa		13.56	□□□□□ -0.24
SNF6	YHL025W	NOT3	P06102	836 aa	Known RBP	13.56	□□□□□ -0.24
SNF6	YHL025W	RET1	P22276	1149 aa	Known RBP	13.56	□□□□□ -0.24
SNF6	YHL025W	ECM21	P38167	1117 aa	Known RBP	13.56	□□□□□ -0.24
SNF6	YHL025W	YGL242C	P53066	181 aa		13.56	□□□□□ -0.24
SNF6	YHL025W	PDR18	P53756	1333 aa		13.56	□□□□□ -0.24
SNF6	YHL025W	THS1	P04801	734 aa	Known RBP	13.55	□□□□□ -0.24
SNF6	YHL025W	MLC1	P53141	149 aa		13.55	□□□□□ -0.24
SNF6	YHL025W	UBP16	Q02863	499 aa		13.55	□□□□□ -0.24
SNF6	YHL025W	ADR1	P07248	1323 aa		13.55	□□□□□ -0.24
SNF6	YHL025W	SIT4	P20604	311 aa		13.54	□□□□□ -0.24
SNF6	YHL025W	YKU70	P32807	602 aa		13.54	□□□□□ -0.24
SNF6	YHL025W	SLA1	P32790	1244 aa		13.53	□□□□□ -0.24
SNF6	YHL025W	DPH6	Q12429	685 aa		13.53	□□□□□ -0.24
SNF6	YHL025W	YLR278C	Q05854	1341 aa		13.53	□□□□□ -0.24
SNF6	YHL025W	CAF20	P12962	161 aa	Known RBP	13.52	□□□□□ -0.25
SNF6	YHL025W	SEC18	P18759	758 aa	Known RBP	13.52	□□□□□ -0.25
SNF6	YHL025W	RTG2	P32608	588 aa	Known RBP	13.51	□□□□□ -0.25
SNF6	YHL025W	KTR3	P38130	404 aa	Predicted RBP	13.51	□□□□□ -0.25
SNF6	YHL025W	GRX6	Q12438	231 aa		13.51	□□□□□ -0.25
SNF6	YHL025W	POM152	P39685	1337 aa		13.5	□□□□□ -0.25
SNF6	YHL025W	NGR1	P32831	672 aa	Known RBP	13.5	□□□□□ -0.25
SNF6	YHL025W	ALO1	P54783	526 aa	Known RBP	13.5	□□□□□ -0.25
SNF6	YHL025W	GCR2	Q01722	534 aa		13.5	□□□□□ -0.25
SNF6	YHL025W	BRE1	Q07457	700 aa	Known RBP	13.5	□□□□□ -0.25
SNF6	YHL025W	FRD1	P32614	470 aa	Known RBP	13.49	□□□□□ -0.25
SNF6	YHL025W	ICP55	P40051	511 aa		13.49	□□□□□ -0.25
SNF6	YHL025W	YIR014W	P40570	242 aa		13.49	□□□□□ -0.25
SNF6	YHL025W	SAS4	Q04003	481 aa		13.49	□□□□□ -0.25
SNF6	YHL025W	THI3	Q07471	609 aa		13.49	□□□□□ -0.25
SNF6	YHL025W	AI2	P03876	854 aa		13.48	□□□□□ -0.25
SNF6	YHL025W	VAS1	P07806	1104 aa	Known RBP	13.48	□□□□□ -0.25
SNF6	YHL025W	RPN1	P38764	993 aa	Known RBP	13.48	□□□□□ -0.25
SNF6	YHL025W	SRC1	Q03707	834 aa		13.48	□□□□□ -0.25
SNF6	YHL025W	DIP2	Q12220	943 aa	Predicted RBP	13.48	□□□□□ -0.25
SNF6	YHL025W	FAS2	P19097	1887 aa	Known RBP	13.47	□□□□□ -0.25
SNF6	YHL025W	MGM1	P32266	881 aa		13.47	□□□□□ -0.25
SNF6	YHL025W	BRN1	P38170	754 aa		13.47	□□□□□ -0.25

Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms