RNA–Protein interactions for RNA: YGR112W

SHY1, Transcript of Mitochondrial inner membrane protein required for complex IV assembly, yeast

Gene SHY1, Length 1,170 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHY1	YGR112W	RMD1	Q03441	430 aa		11.21	□□□□□ -0.61
SHY1	YGR112W	YLR271W	Q06152	274 aa		11.21	□□□□□ -0.61
SHY1	YGR112W	PDR18	P53756	1333 aa		11.2	□□□□□ -0.62
SHY1	YGR112W	NOT3	P06102	836 aa	Known RBP	11.2	□□□□□ -0.62
SHY1	YGR112W	ARG8	P18544	423 aa		11.2	□□□□□ -0.62
SHY1	YGR112W	GRX1	P25373	110 aa	Known RBP	11.2	□□□□□ -0.62
SHY1	YGR112W	HXT10	P43581	546 aa		11.19	□□□□□ -0.62
SHY1	YGR112W	PHM7	Q12252	991 aa		11.19	□□□□□ -0.62
SHY1	YGR112W	RIM15	P43565	1770 aa		11.18	□□□□□ -0.62
SHY1	YGR112W	DCD1	P06773	312 aa		11.18	□□□□□ -0.62
SHY1	YGR112W	YKR075C	P36155	307 aa		11.18	□□□□□ -0.62
SHY1	YGR112W	PKH1	Q03407	766 aa		11.18	□□□□□ -0.62
SHY1	YGR112W	RNR2	P09938	399 aa	Known RBP	11.17	□□□□□ -0.62
SHY1	YGR112W	SLN1	P39928	1220 aa	Predicted RBP	11.17	□□□□□ -0.62
SHY1	YGR112W	YGL242C	P53066	181 aa		11.17	□□□□□ -0.62
SHY1	YGR112W	MLC1	P53141	149 aa		11.17	□□□□□ -0.62
SHY1	YGR112W	MDG1	P53885	366 aa		11.17	□□□□□ -0.62
SHY1	YGR112W	FPR4	Q06205	392 aa	Predicted RBP	11.17	□□□□□ -0.62
SHY1	YGR112W	BRE1	Q07457	700 aa	Known RBP	11.17	□□□□□ -0.62
SHY1	YGR112W	RIM20	Q12033	661 aa		11.17	□□□□□ -0.62
SHY1	YGR112W	PSH1	Q12161	406 aa		11.17	□□□□□ -0.62
SHY1	YGR112W	TRL1	P09880	827 aa	Known RBP	11.16	□□□□□ -0.62
SHY1	YGR112W	KTR3	P38130	404 aa	Predicted RBP	11.16	□□□□□ -0.62
SHY1	YGR112W	TEA1	P47988	759 aa		11.16	□□□□□ -0.62
SHY1	YGR112W	MRPS35	P53292	345 aa		11.16	□□□□□ -0.62
SHY1	YGR112W	ALO1	P54783	526 aa	Known RBP	11.16	□□□□□ -0.62
SHY1	YGR112W	FCP1	Q03254	732 aa		11.16	□□□□□ -0.62
SHY1	YGR112W	DUR1,2	P32528	1835 aa	Known RBP	11.15	□□□□□ -0.62
SHY1	YGR112W	SLA1	P32790	1244 aa		11.15	□□□□□ -0.62
SHY1	YGR112W	ARL1	P38116	183 aa	Known RBP	11.15	□□□□□ -0.62
SHY1	YGR112W	NPA3	P47122	385 aa		11.15	□□□□□ -0.62
SHY1	YGR112W	YPR148C	Q06523	435 aa		11.15	□□□□□ -0.62
SHY1	YGR112W	AAP1	P37898	856 aa	Known RBP	11.14	□□□□□ -0.63
SHY1	YGR112W	VPS20	Q04272	221 aa		11.14	□□□□□ -0.63
SHY1	YGR112W	YGL082W	P53155	381 aa		11.13	□□□□□ -0.63
SHY1	YGR112W	MTC5	Q03897	1148 aa		11.13	□□□□□ -0.63
SHY1	YGR112W	SUP35	P05453	685 aa	Known RBP	11.12	□□□□□ -0.63
SHY1	YGR112W	SER1	P33330	395 aa	Known RBP	11.11	□□□□□ -0.63
SHY1	YGR112W	HAP5	Q02516	242 aa		11.11	□□□□□ -0.63
SHY1	YGR112W	LAM6	Q08001	693 aa		11.11	□□□□□ -0.63
SHY1	YGR112W	KTR1	P27810	393 aa	Known RBP	11.1	□□□□□ -0.63
SHY1	YGR112W	BDH2	P39713	417 aa		11.1	□□□□□ -0.63
SHY1	YGR112W	KRI1	P42846	591 aa	Known RBP	11.1	□□□□□ -0.63
SHY1	YGR112W	GYP5	Q12344	894 aa		11.1	□□□□□ -0.63
SHY1	YGR112W	SSK22	P25390	1331 aa	Predicted RBP	11.09	□□□□□ -0.63
SHY1	YGR112W	PIB2	P53191	635 aa		11.09	□□□□□ -0.63
SHY1	YGR112W	COG8	Q04632	607 aa		11.09	□□□□□ -0.63
SHY1	YGR112W	SNU66	Q12420	587 aa	Predicted RBP	11.09	□□□□□ -0.63
SHY1	YGR112W	AIM9	P40053	627 aa	Known RBP	11.08	□□□□□ -0.64
SHY1	YGR112W	YGL081W	P53156	320 aa		11.08	□□□□□ -0.64
SHY1	YGR112W	AI2	P03876	854 aa		11.07	□□□□□ -0.64
SHY1	YGR112W	BIK1	P11709	440 aa		11.07	□□□□□ -0.64
SHY1	YGR112W	KNS1	P32350	737 aa	Predicted RBP	11.07	□□□□□ -0.64
SHY1	YGR112W	UBP16	Q02863	499 aa		11.07	□□□□□ -0.64
SHY1	YGR112W	HRQ1	Q05549	1077 aa		11.07	□□□□□ -0.64
SHY1	YGR112W	NYV1	Q12255	253 aa		11.07	□□□□□ -0.64
SHY1	YGR112W	MSB4	Q12317	492 aa		11.07	□□□□□ -0.64
SHY1	YGR112W	UTP10	P42945	1769 aa	Known RBP	11.06	□□□□□ -0.64
SHY1	YGR112W	SEC18	P18759	758 aa	Known RBP	11.06	□□□□□ -0.64
SHY1	YGR112W	PRP40	P33203	583 aa	Known RBP	11.06	□□□□□ -0.64
SHY1	YGR112W	STM1	P39015	273 aa	Known RBP	11.06	□□□□□ -0.64
SHY1	YGR112W	YIL055C	P40523	627 aa	Known RBP	11.06	□□□□□ -0.64
SHY1	YGR112W	HST1	P53685	503 aa		11.06	□□□□□ -0.64
SHY1	YGR112W	GRE2	Q12068	342 aa	Known RBP	11.06	□□□□□ -0.64
SHY1	YGR112W	EPS1	P40557	701 aa		11.05	□□□□□ -0.64
SHY1	YGR112W	RPN11	P43588	306 aa	Known RBP	11.05	□□□□□ -0.64
SHY1	YGR112W	SAC3	P46674	1301 aa		11.05	□□□□□ -0.64
SHY1	YGR112W	CIR1	P42940	261 aa		11.04	□□□□□ -0.64
SHY1	YGR112W	RPN7	Q06103	429 aa	Known RBP	11.04	□□□□□ -0.64
SHY1	YGR112W	PBY1	P38254	753 aa		11.03	□□□□□ -0.64
SHY1	YGR112W	YJL181W	P46987	611 aa		11.03	□□□□□ -0.64
SHY1	YGR112W	YNL193W	P53870	558 aa		11.03	□□□□□ -0.64
SHY1	YGR112W	RPL19A	P0CX82	189 aa	Known RBP	11.02	□□□□□ -0.65
SHY1	YGR112W	RPL19B	P0CX83	189 aa	Predicted RBP	11.02	□□□□□ -0.65
SHY1	YGR112W	HAT1	Q12341	374 aa		11.02	□□□□□ -0.65
SHY1	YGR112W	TPM1	P17536	199 aa	Known RBP	11.01	□□□□□ -0.65
SHY1	YGR112W	OSH3	P38713	996 aa	Known RBP	11.01	□□□□□ -0.65
SHY1	YGR112W	SPO22	P40511	975 aa		11.01	□□□□□ -0.65
SHY1	YGR112W	HYR1	P40581	163 aa	Known RBP	11.01	□□□□□ -0.65
SHY1	YGR112W	CWH41	P53008	833 aa		11.01	□□□□□ -0.65
SHY1	YGR112W	KEX1	P09620	729 aa		11	□□□□□ -0.65
SHY1	YGR112W	ADR1	P07248	1323 aa		11	□□□□□ -0.65
SHY1	YGR112W	RVS167	P39743	482 aa	Known RBP	10.99	□□□□□ -0.65
SHY1	YGR112W	NPR2	P39923	615 aa		10.99	□□□□□ -0.65
SHY1	YGR112W	CTF18	P49956	741 aa		10.99	□□□□□ -0.65
SHY1	YGR112W	RSC1	P53236	928 aa		10.99	□□□□□ -0.65
SHY1	YGR112W	TSR3	Q12094	313 aa	Known RBP	10.99	□□□□□ -0.65
SHY1	YGR112W	PGA3	Q12746	312 aa	Known RBP	10.99	□□□□□ -0.65
SHY1	YGR112W	OPI1	P21957	404 aa		10.98	□□□□□ -0.65
SHY1	YGR112W	CIC1	P38779	376 aa	Known RBP	10.98	□□□□□ -0.65
SHY1	YGR112W	RPN12	P32496	274 aa		10.97	□□□□□ -0.65
SHY1	YGR112W	PEX19	Q07418	342 aa		10.97	□□□□□ -0.65
SHY1	YGR112W	RRI2	Q12348	645 aa		10.97	□□□□□ -0.65
SHY1	YGR112W	AIM44	Q99299	758 aa		10.97	□□□□□ -0.65
SHY1	YGR112W	PRX1	P34227	261 aa	Known RBP	10.96	□□□□□ -0.65
SHY1	YGR112W	RSM25	P40496	264 aa		10.96	□□□□□ -0.65
SHY1	YGR112W	VID28	P40547	921 aa		10.96	□□□□□ -0.65
SHY1	YGR112W	ARP5	P53946	755 aa		10.96	□□□□□ -0.65
SHY1	YGR112W	LCD1	Q04377	747 aa		10.96	□□□□□ -0.65
SHY1	YGR112W	APC11	Q12157	165 aa		10.96	□□□□□ -0.65

Retrieved 100 of 5,963 RNA–protein pairs in 41.4 ms