RNA–Protein interactions for RNA: YGL029W

CGR1, Protein involved in nucleolar integrity and processing of pre-rRNA, yeast

Gene CGR1, Length 363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CGR1	YGL029W	SSF1	P38789	453 aa	Predicted RBP	5.1	□□□□□ -1.59
CGR1	YGL029W	NAP1	P25293	417 aa	Known RBP	5.09	□□□□□ -1.59
CGR1	YGL029W	MCX1	P38323	520 aa	Predicted RBP	5.09	□□□□□ -1.59
CGR1	YGL029W	SEN54	Q02825	467 aa	Predicted RBP	5.09	□□□□□ -1.59
CGR1	YGL029W	CDC3	P32457	520 aa	Known RBP	5.08	□□□□□ -1.6
CGR1	YGL029W	KRE33	P53914	1056 aa	Known RBP	5.08	□□□□□ -1.6
CGR1	YGL029W	RAD59	Q12223	238 aa		5.08	□□□□□ -1.6
CGR1	YGL029W	YDR461C-A	Q2V2P7	80 aa		5.08	□□□□□ -1.6
CGR1	YGL029W	CSE4	P36012	229 aa		5.07	□□□□□ -1.6
CGR1	YGL029W	UBP15	P50101	1230 aa		5.07	□□□□□ -1.6
CGR1	YGL029W	YNR014W	P53719	212 aa		5.07	□□□□□ -1.6
CGR1	YGL029W	YPR084W	Q06821	456 aa		5.07	□□□□□ -1.6
CGR1	YGL029W	SUP45	P12385	437 aa	Known RBP	5.06	□□□□□ -1.6
CGR1	YGL029W	PUP1	P25043	261 aa		5.06	□□□□□ -1.6
CGR1	YGL029W	RTG2	P32608	588 aa	Known RBP	5.06	□□□□□ -1.6
CGR1	YGL029W	SLD2	P34252	453 aa		5.06	□□□□□ -1.6
CGR1	YGL029W	PAM1	P37304	830 aa	Known RBP	5.06	□□□□□ -1.6
CGR1	YGL029W	AMN1	P38285	549 aa	Predicted RBP	5.06	□□□□□ -1.6
CGR1	YGL029W	PKH3	Q03306	898 aa	Predicted RBP	5.06	□□□□□ -1.6
CGR1	YGL029W	YML083C	Q04526	418 aa		5.06	□□□□□ -1.6
CGR1	YGL029W	ARG8	P18544	423 aa		5.05	□□□□□ -1.6
CGR1	YGL029W	SLN1	P39928	1220 aa	Predicted RBP	5.05	□□□□□ -1.6
CGR1	YGL029W	YNL108C	P53929	270 aa		5.05	□□□□□ -1.6
CGR1	YGL029W	ISU1	Q03020	165 aa		5.05	□□□□□ -1.6
CGR1	YGL029W	IOC4	Q04213	475 aa		5.05	□□□□□ -1.6
CGR1	YGL029W	TEC1	P18412	486 aa		5.04	□□□□□ -1.6
CGR1	YGL029W	SLA1	P32790	1244 aa		5.04	□□□□□ -1.6
CGR1	YGL029W	SNU71	P53207	620 aa	Known RBP	5.04	□□□□□ -1.6
CGR1	YGL029W	NOP7	P53261	605 aa	Known RBP	5.04	□□□□□ -1.6
CGR1	YGL029W	RPL34A	P87262	121 aa	Predicted RBP	5.04	□□□□□ -1.6
CGR1	YGL029W	MRX10	Q05648	414 aa		5.04	□□□□□ -1.6
CGR1	YGL029W	YDR215C	Q12240	137 aa		5.04	□□□□□ -1.6
CGR1	YGL029W	ENO1	P00924	437 aa	Known RBP	5.03	□□□□□ -1.6
CGR1	YGL029W	ENO2	P00925	437 aa	Known RBP	5.03	□□□□□ -1.6
CGR1	YGL029W	SIS2	P36024	562 aa		5.03	□□□□□ -1.6
CGR1	YGL029W	MCA1	Q08601	432 aa		5.03	□□□□□ -1.6
CGR1	YGL029W	SPT5	P27692	1063 aa	Known RBP	5.02	□□□□□ -1.61
CGR1	YGL029W	RIM21	P48565	533 aa		5.02	□□□□□ -1.61
CGR1	YGL029W	TY1A-DR3	Q12441	440 aa		5.02	□□□□□ -1.61
CGR1	YGL029W	GPM1	P00950	247 aa	Known RBP	5.01	□□□□□ -1.61
CGR1	YGL029W	RRN6	P32786	894 aa		5.01	□□□□□ -1.61
CGR1	YGL029W	SSN3	P39073	555 aa		5.01	□□□□□ -1.61
CGR1	YGL029W	BOI2	P39969	1040 aa		5.01	□□□□□ -1.61
CGR1	YGL029W	DLD3	P39976	496 aa	Known RBP	5.01	□□□□□ -1.61
CGR1	YGL029W	LSB6	P42951	607 aa		5.01	□□□□□ -1.61
CGR1	YGL029W	HEM3	P28789	327 aa		5	□□□□□ -1.61
CGR1	YGL029W	MSN5	P52918	1224 aa		5	□□□□□ -1.61
CGR1	YGL029W	ATG20	Q07528	640 aa		5	□□□□□ -1.61
CGR1	YGL029W	MAK16	P10962	306 aa	Predicted RBP	4.99	□□□□□ -1.61
CGR1	YGL029W	YDJ1	P25491	409 aa	Known RBP	4.99	□□□□□ -1.61
CGR1	YGL029W	PEP12	P32854	288 aa		4.99	□□□□□ -1.61
CGR1	YGL029W	TGL4	P36165	910 aa		4.99	□□□□□ -1.61
CGR1	YGL029W	HAT1	Q12341	374 aa		4.99	□□□□□ -1.61
CGR1	YGL029W	MAC1	P35192	417 aa		4.97	□□□□□ -1.61
CGR1	YGL029W	RDS2	P19541	446 aa	Known RBP	4.96	□□□□□ -1.62
CGR1	YGL029W	GUT2	P32191	649 aa		4.95	□□□□□ -1.62
CGR1	YGL029W	RRP15	Q06511	250 aa	Predicted RBP	4.95	□□□□□ -1.62
CGR1	YGL029W	RPP2B	P02400	110 aa	Known RBP	4.94	□□□□□ -1.62
CGR1	YGL029W	IPL1	P38991	367 aa		4.94	□□□□□ -1.62
CGR1	YGL029W	STM1	P39015	273 aa	Known RBP	4.94	□□□□□ -1.62
CGR1	YGL029W	MET10	P39692	1035 aa		4.94	□□□□□ -1.62
CGR1	YGL029W	NAF1	P53919	492 aa	Known RBP	4.94	□□□□□ -1.62
CGR1	YGL029W	WTM2	Q12206	467 aa		4.94	□□□□□ -1.62
CGR1	YGL029W	YTA7	P40340	1379 aa		4.93	□□□□□ -1.62
CGR1	YGL029W	FPS1	P23900	669 aa		4.93	□□□□□ -1.62
CGR1	YGL029W	TAT1	P38085	619 aa		4.93	□□□□□ -1.62
CGR1	YGL029W	YBL113C	Q7M4S9	792 aa		4.93	□□□□□ -1.62
CGR1	YGL029W	ASF1	P32447	279 aa		4.92	□□□□□ -1.62
CGR1	YGL029W	IRC24	P40580	263 aa		4.92	□□□□□ -1.62
CGR1	YGL029W	YPP1	P46951	817 aa		4.92	□□□□□ -1.62
CGR1	YGL029W	MCM16	Q12262	181 aa		4.92	□□□□□ -1.62
CGR1	YGL029W	SEC20	P28791	383 aa		4.91	□□□□□ -1.62
CGR1	YGL029W	MET1	P36150	593 aa		4.91	□□□□□ -1.62
CGR1	YGL029W	AHP1	P38013	176 aa	Known RBP	4.91	□□□□□ -1.62
CGR1	YGL029W	TPS3	P38426	1054 aa	Known RBP	4.91	□□□□□ -1.62
CGR1	YGL029W	OCA5	P38738	679 aa		4.91	□□□□□ -1.62
CGR1	YGL029W	ERP5	P38819	212 aa		4.91	□□□□□ -1.62
CGR1	YGL029W	PRY1	P47032	299 aa		4.91	□□□□□ -1.62
CGR1	YGL029W	ALO1	P54783	526 aa	Known RBP	4.91	□□□□□ -1.62
CGR1	YGL029W	ALD2	P47771	506 aa		4.9	□□□□□ -1.63
CGR1	YGL029W	TRL1	P09880	827 aa	Known RBP	4.89	□□□□□ -1.63
CGR1	YGL029W	GAL2	P13181	574 aa		4.89	□□□□□ -1.63
CGR1	YGL029W	PDC5	P16467	563 aa	Known RBP	4.89	□□□□□ -1.63
CGR1	YGL029W	KNS1	P32350	737 aa	Predicted RBP	4.89	□□□□□ -1.63
CGR1	YGL029W	ECM23	Q02710	187 aa		4.89	□□□□□ -1.63
CGR1	YGL029W	YPL034W	Q03083	165 aa		4.89	□□□□□ -1.63
CGR1	YGL029W	FRA1	Q07825	749 aa		4.89	□□□□□ -1.63
CGR1	YGL029W	MSC6	Q08818	692 aa	Known RBP	4.89	□□□□□ -1.63
CGR1	YGL029W	CWC15	Q03772	175 aa	Known RBP	4.88	□□□□□ -1.63
CGR1	YGL029W	SPT2	P06843	333 aa	Predicted RBP	4.87	□□□□□ -1.63
CGR1	YGL029W	DAT1	P13483	248 aa	Known RBP	4.87	□□□□□ -1.63
CGR1	YGL029W	ATE1	P16639	503 aa		4.87	□□□□□ -1.63
CGR1	YGL029W	MRPL16	P38064	232 aa		4.87	□□□□□ -1.63
CGR1	YGL029W	PPX1	P38698	397 aa		4.87	□□□□□ -1.63
CGR1	YGL029W	UTP7	P40055	554 aa	Known RBP	4.87	□□□□□ -1.63
CGR1	YGL029W	MDJ2	P42834	146 aa		4.87	□□□□□ -1.63
CGR1	YGL029W	STE20	Q03497	939 aa	Known RBP	4.87	□□□□□ -1.63
CGR1	YGL029W	WHI5	Q12416	295 aa		4.87	□□□□□ -1.63
CGR1	YGL029W	SHM1	P37292	490 aa	Predicted RBP	4.86	□□□□□ -1.63
CGR1	YGL029W	UBX7	P38349	436 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 68.7 ms