RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	HAT1	Q12341	374 aa		8.08	□□□□□ -1.12
VMA3	YEL027W	PMD1	P32634	1753 aa		8.07	□□□□□ -1.12
VMA3	YEL027W	SSK22	P25390	1331 aa	Predicted RBP	8.07	□□□□□ -1.12
VMA3	YEL027W	YKU70	P32807	602 aa		8.07	□□□□□ -1.12
VMA3	YEL027W	YBR287W	P38355	427 aa		8.07	□□□□□ -1.12
VMA3	YEL027W	SHC1	P39000	512 aa		8.07	□□□□□ -1.12
VMA3	YEL027W	SRT1	Q03175	343 aa		8.07	□□□□□ -1.12
VMA3	YEL027W	ATG20	Q07528	640 aa		8.07	□□□□□ -1.12
VMA3	YEL027W	MAK21	Q12176	1025 aa	Known RBP	8.07	□□□□□ -1.12
VMA3	YEL027W	GRX6	Q12438	231 aa		8.07	□□□□□ -1.12
VMA3	YEL027W	UBP16	Q02863	499 aa		8.06	□□□□□ -1.12
VMA3	YEL027W	SYF1	Q04048	859 aa	Predicted RBP	8.06	□□□□□ -1.12
VMA3	YEL027W	YOL057W	Q08225	711 aa		8.06	□□□□□ -1.12
VMA3	YEL027W	RPN1	P38764	993 aa	Known RBP	8.05	□□□□□ -1.12
VMA3	YEL027W	SAS4	Q04003	481 aa		8.05	□□□□□ -1.12
VMA3	YEL027W	PUS5	Q06244	254 aa		8.05	□□□□□ -1.12
VMA3	YEL027W	RET1	P22276	1149 aa	Known RBP	8.04	□□□□□ -1.12
VMA3	YEL027W	FRD1	P32614	470 aa	Known RBP	8.04	□□□□□ -1.12
VMA3	YEL027W	YLR271W	Q06152	274 aa		8.04	□□□□□ -1.12
VMA3	YEL027W	THS1	P04801	734 aa	Known RBP	8.03	□□□□□ -1.12
VMA3	YEL027W	RAD2	P07276	1031 aa		8.03	□□□□□ -1.12
VMA3	YEL027W	DNM1	P54861	757 aa		8.03	□□□□□ -1.12
VMA3	YEL027W	PKH1	Q03407	766 aa		8.03	□□□□□ -1.12
VMA3	YEL027W	RTG2	P32608	588 aa	Known RBP	8.01	□□□□□ -1.13
VMA3	YEL027W	YIL092W	P40497	633 aa		8.01	□□□□□ -1.13
VMA3	YEL027W	DIP2	Q12220	943 aa	Predicted RBP	8.01	□□□□□ -1.13
VMA3	YEL027W	DAL5	P15365	543 aa		8	□□□□□ -1.13
VMA3	YEL027W	CST6	P40535	587 aa		8	□□□□□ -1.13
VMA3	YEL027W	SWI1	P09547	1314 aa		8	□□□□□ -1.13
VMA3	YEL027W	YLR278C	Q05854	1341 aa		8	□□□□□ -1.13
VMA3	YEL027W	FUN12	P39730	1002 aa	Known RBP	7.99	□□□□□ -1.13
VMA3	YEL027W	YPP1	P46951	817 aa		7.99	□□□□□ -1.13
VMA3	YEL027W	FCP1	Q03254	732 aa		7.99	□□□□□ -1.13
VMA3	YEL027W	DPL1	Q05567	589 aa		7.99	□□□□□ -1.13
VMA3	YEL027W	YDR306C	Q06640	478 aa		7.99	□□□□□ -1.13
VMA3	YEL027W	MRP7	P12687	371 aa		7.98	□□□□□ -1.13
VMA3	YEL027W	MSM1	P22438	575 aa		7.98	□□□□□ -1.13
VMA3	YEL027W	YJR008W	P47085	338 aa		7.98	□□□□□ -1.13
VMA3	YEL027W	NOP8	Q08287	484 aa	Predicted RBP	7.98	□□□□□ -1.13
VMA3	YEL027W	NUP133	P36161	1157 aa		7.97	□□□□□ -1.13
VMA3	YEL027W	FAS2	P19097	1887 aa	Known RBP	7.97	□□□□□ -1.13
VMA3	YEL027W	TOM1	Q03280	3268 aa		7.96	□□□□□ -1.13
VMA3	YEL027W	TIF4632	P39936	914 aa	Known RBP	7.96	□□□□□ -1.14
VMA3	YEL027W	CSI1	Q04368	295 aa		7.96	□□□□□ -1.14
VMA3	YEL027W	DPH6	Q12429	685 aa		7.96	□□□□□ -1.14
VMA3	YEL027W	HKR1	P41809	1802 aa		7.95	□□□□□ -1.14
VMA3	YEL027W	RPS19A	P07280	144 aa	Known RBP	7.95	□□□□□ -1.14
VMA3	YEL027W	RPS19B	P07281	144 aa	Predicted RBP	7.95	□□□□□ -1.14
VMA3	YEL027W	GLC3	P32775	704 aa		7.95	□□□□□ -1.14
VMA3	YEL027W	SET1	P38827	1080 aa	Known RBP	7.95	□□□□□ -1.14
VMA3	YEL027W	VHR2	P40041	505 aa		7.95	□□□□□ -1.14
VMA3	YEL027W	FET4	P40988	552 aa		7.95	□□□□□ -1.14
VMA3	YEL027W	TIM50	Q02776	476 aa		7.95	□□□□□ -1.14
VMA3	YEL027W	GAP1	P19145	602 aa	Predicted RBP	7.94	□□□□□ -1.14
VMA3	YEL027W	KRE2	P27809	442 aa		7.94	□□□□□ -1.14
VMA3	YEL027W	FPR3	P38911	411 aa	Known RBP	7.94	□□□□□ -1.14
VMA3	YEL027W	ICP55	P40051	511 aa		7.94	□□□□□ -1.14
VMA3	YEL027W	SET4	P42948	560 aa		7.94	□□□□□ -1.14
VMA3	YEL027W	ITC1	P53125	1264 aa		7.94	□□□□□ -1.14
VMA3	YEL027W	UBX2	Q04228	584 aa		7.94	□□□□□ -1.14
VMA3	YEL027W	TRP5	P00931	707 aa	Known RBP	7.93	□□□□□ -1.14
VMA3	YEL027W	RAD24	P32641	659 aa		7.93	□□□□□ -1.14
VMA3	YEL027W	YGR122W	P53272	402 aa		7.93	□□□□□ -1.14
VMA3	YEL027W	AIM7	Q12156	149 aa		7.93	□□□□□ -1.14
VMA3	YEL027W	SAC3	P46674	1301 aa		7.93	□□□□□ -1.14
VMA3	YEL027W	FIG2	P25653	1609 aa		7.92	□□□□□ -1.14
VMA3	YEL027W	TFA1	P36100	482 aa		7.92	□□□□□ -1.14
VMA3	YEL027W	POL32	P47110	350 aa		7.92	□□□□□ -1.14
VMA3	YEL027W	TRM44	Q02648	567 aa	Known RBP	7.92	□□□□□ -1.14
VMA3	YEL027W	PSH1	Q12161	406 aa		7.92	□□□□□ -1.14
VMA3	YEL027W	SWC3	P31376	625 aa		7.91	□□□□□ -1.14
VMA3	YEL027W	YNG2	P38806	282 aa	Known RBP	7.91	□□□□□ -1.14
VMA3	YEL027W	BOI2	P39969	1040 aa		7.91	□□□□□ -1.14
VMA3	YEL027W	RPT4	P53549	437 aa	Known RBP	7.91	□□□□□ -1.14
VMA3	YEL027W	PUF6	Q04373	656 aa	Known RBP	7.91	□□□□□ -1.14
VMA3	YEL027W	CRF1	Q04930	467 aa		7.91	□□□□□ -1.14
VMA3	YEL027W	GAS5	Q08193	484 aa		7.91	□□□□□ -1.14
VMA3	YEL027W	RRG1	Q12167	365 aa	Predicted RBP	7.91	□□□□□ -1.14
VMA3	YEL027W	MGM1	P32266	881 aa		7.9	□□□□□ -1.14
VMA3	YEL027W	AFG2	P32794	780 aa		7.9	□□□□□ -1.14
VMA3	YEL027W	NGR1	P32831	672 aa	Known RBP	7.9	□□□□□ -1.14
VMA3	YEL027W	UBP12	P39538	1254 aa		7.9	□□□□□ -1.14
VMA3	YEL027W	YIL089W	P40500	205 aa		7.9	□□□□□ -1.14
VMA3	YEL027W	EMP47	P43555	445 aa		7.9	□□□□□ -1.14
VMA3	YEL027W	VPS4	P52917	437 aa		7.9	□□□□□ -1.14
VMA3	YEL027W	YGR117C	P53270	476 aa		7.9	□□□□□ -1.14
VMA3	YEL027W	MTC5	Q03897	1148 aa		7.9	□□□□□ -1.14
VMA3	YEL027W	THI3	Q07471	609 aa		7.9	□□□□□ -1.14
VMA3	YEL027W	SUP35	P05453	685 aa	Known RBP	7.89	□□□□□ -1.15
VMA3	YEL027W	SPL2	P38839	148 aa		7.89	□□□□□ -1.15
VMA3	YEL027W	PEA2	P40091	420 aa		7.89	□□□□□ -1.15
VMA3	YEL027W	HPR1	P17629	752 aa	Known RBP	7.88	□□□□□ -1.15
VMA3	YEL027W	ETP1	P38748	585 aa	Known RBP	7.88	□□□□□ -1.15
VMA3	YEL027W	HGH1	P48362	394 aa	Known RBP	7.88	□□□□□ -1.15
VMA3	YEL027W	STV1	P37296	890 aa		7.87	□□□□□ -1.15
VMA3	YEL027W	GSM1	P42950	618 aa		7.87	□□□□□ -1.15
VMA3	YEL027W	SPO1	P53541	631 aa		7.87	□□□□□ -1.15
VMA3	YEL027W	DUS1	P53759	423 aa	Known RBP	7.87	□□□□□ -1.15
VMA3	YEL027W	SRC1	Q03707	834 aa		7.87	□□□□□ -1.15
VMA3	YEL027W	CWC15	Q03772	175 aa	Known RBP	7.87	□□□□□ -1.15

Retrieved 100 of 5,963 RNA–protein pairs in 90.6 ms