RNA–Protein interactions for RNA: YDR353W

TRR1, Transcript of Cytoplasmic thioredoxin reductase, yeastyeast

Gene TRR1, Length 960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRR1YDR353W SCT1P32784 759 aa8.2□□□□□ -1.1
TRR1YDR353W ORC6P38826 435 aa8.2□□□□□ -1.1
TRR1YDR353W CIN4P39110 191 aa8.2□□□□□ -1.1
TRR1YDR353W DPL1Q05567 589 aa8.2□□□□□ -1.1
TRR1YDR353W NOP14Q99207 810 aaKnown RBP8.2□□□□□ -1.1
TRR1YDR353W DEP1P31385 405 aa8.19□□□□□ -1.1
TRR1YDR353W MED8P38304 223 aa8.19□□□□□ -1.1
TRR1YDR353W ECM1P39715 212 aa8.19□□□□□ -1.1
TRR1YDR353W HOS3Q02959 697 aaKnown RBP8.19□□□□□ -1.1
TRR1YDR353W COG8Q04632 607 aa8.19□□□□□ -1.1
TRR1YDR353W CDC73Q06697 393 aa8.19□□□□□ -1.1
TRR1YDR353W SWE1P32944 819 aa8.18□□□□□ -1.1
TRR1YDR353W ARH1P48360 493 aa8.18□□□□□ -1.1
TRR1YDR353W NUP42P49686 430 aaKnown RBP8.18□□□□□ -1.1
TRR1YDR353W LCD1Q04377 747 aa8.18□□□□□ -1.1
TRR1YDR353W GAP1P19145 602 aaPredicted RBP8.17□□□□□ -1.1
TRR1YDR353W SWI3P32591 825 aa8.17□□□□□ -1.1
TRR1YDR353W TEA1P47988 759 aa8.17□□□□□ -1.1
TRR1YDR353W CSC1Q06538 782 aa8.16□□□□□ -1.1
TRR1YDR353W ETT1Q08421 412 aaKnown RBP8.16□□□□□ -1.1
TRR1YDR353W BCK1Q01389 1478 aa8.15□□□□□ -1.1
TRR1YDR353W PSE1P32337 1089 aaKnown RBP8.15□□□□□ -1.1
TRR1YDR353W RPN7Q06103 429 aaKnown RBP8.15□□□□□ -1.1
TRR1YDR353W NOP8Q08287 484 aaPredicted RBP8.15□□□□□ -1.1
TRR1YDR353W YNR021WP53723 404 aaKnown RBP8.14□□□□□ -1.11
TRR1YDR353W HAP5Q02516 242 aa8.14□□□□□ -1.11
TRR1YDR353W ISU2Q12056 156 aa8.14□□□□□ -1.11
TRR1YDR353W PRE3P38624 215 aa8.13□□□□□ -1.11
TRR1YDR353W NMA111P53920 997 aa8.13□□□□□ -1.11
TRR1YDR353W RLP24Q07915 199 aaKnown RBP8.13□□□□□ -1.11
TRR1YDR353W TFB4Q12004 338 aa8.13□□□□□ -1.11
TRR1YDR353W HAP1P0CE41 1502 aa8.13□□□□□ -1.11
TRR1YDR353W SPE2P21182 396 aa8.12□□□□□ -1.11
TRR1YDR353W DIT2P21595 489 aa8.12□□□□□ -1.11
TRR1YDR353W ITC1P53125 1264 aa8.12□□□□□ -1.11
TRR1YDR353W ELP4Q02884 456 aaKnown RBP8.12□□□□□ -1.11
TRR1YDR353W SNF2P22082 1703 aa8.12□□□□□ -1.11
TRR1YDR353W CHL1P22516 861 aaPredicted RBP8.11□□□□□ -1.11
TRR1YDR353W RPS0AP32905 252 aaKnown RBP8.11□□□□□ -1.11
TRR1YDR353W RSC1P53236 928 aa8.11□□□□□ -1.11
TRR1YDR353W YDR344CQ05510 147 aa8.11□□□□□ -1.11
TRR1YDR353W YSH1Q06224 779 aaPredicted RBP8.11□□□□□ -1.11
TRR1YDR353W BMS1Q08965 1183 aaKnown RBP8.11□□□□□ -1.11
TRR1YDR353W PET111P08468 800 aa8.1□□□□□ -1.11
TRR1YDR353W IPL1P38991 367 aa8.1□□□□□ -1.11
TRR1YDR353W STU2P46675 888 aa8.1□□□□□ -1.11
TRR1YDR353W ECM16Q04217 1267 aaKnown RBP8.1□□□□□ -1.11
TRR1YDR353W MDM38Q08179 573 aa8.1□□□□□ -1.11
TRR1YDR353W SFI1Q12369 946 aa8.1□□□□□ -1.11
TRR1YDR353W YOL087CQ99247 1116 aa8.1□□□□□ -1.11
TRR1YDR353W SAP190P36123 1033 aa8.09□□□□□ -1.11
TRR1YDR353W MVP1P40959 511 aaKnown RBP8.09□□□□□ -1.11
TRR1YDR353W PEX21P50091 288 aa8.09□□□□□ -1.11
TRR1YDR353W BNI4P53858 892 aa8.09□□□□□ -1.11
TRR1YDR353W MRS2Q01926 470 aa8.09□□□□□ -1.11
TRR1YDR353W VPS30Q02948 557 aa8.09□□□□□ -1.11
TRR1YDR353W IOC4Q04213 475 aa8.09□□□□□ -1.11
TRR1YDR353W RGR1P19263 1082 aa8.08□□□□□ -1.12
TRR1YDR353W SPT23P35210 1082 aa8.08□□□□□ -1.12
TRR1YDR353W TYS1P36421 394 aaKnown RBP8.08□□□□□ -1.12
TRR1YDR353W YAP3P38749 330 aa8.08□□□□□ -1.12
TRR1YDR353W MIC60P36112 540 aa8.07□□□□□ -1.12
TRR1YDR353W RKM3P38222 552 aa8.07□□□□□ -1.12
TRR1YDR353W VPS72Q03388 795 aa8.07□□□□□ -1.12
TRR1YDR353W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.07□□□□□ -1.12not detected
TRR1YDR353W GRX3Q03835 250 aa8.07□□□□□ -1.12
TRR1YDR353W YDL144CQ07589 356 aa8.07□□□□□ -1.12
TRR1YDR353W SWH1P35845 1188 aa8.06□□□□□ -1.12
TRR1YDR353W ALD4P46367 519 aaKnown RBP8.06□□□□□ -1.12
TRR1YDR353W YNL050CP53952 270 aa8.06□□□□□ -1.12
TRR1YDR353W RRP15Q06511 250 aaPredicted RBP8.06□□□□□ -1.12
TRR1YDR353W PUS1Q12211 544 aaKnown RBP8.06□□□□□ -1.12
TRR1YDR353W SEC39Q12745 709 aa8.06□□□□□ -1.12
TRR1YDR353W RAD51P25454 400 aa8.05□□□□□ -1.12
TRR1YDR353W MCM2P29469 868 aa8.05□□□□□ -1.12
TRR1YDR353W CEP3P40969 608 aa8.05□□□□□ -1.12
TRR1YDR353W TAF8Q03750 510 aa8.05□□□□□ -1.12
TRR1YDR353W UTP13Q05946 817 aaKnown RBP8.05□□□□□ -1.12
TRR1YDR353W YVC1Q12324 675 aa8.05□□□□□ -1.12
TRR1YDR353W DNF3Q12674 1656 aa8.05□□□□□ -1.12
TRR1YDR353W SRS2P12954 1174 aa8.04□□□□□ -1.12
TRR1YDR353W ZUO1P32527 433 aaKnown RBP8.04□□□□□ -1.12
TRR1YDR353W PBY1P38254 753 aa8.04□□□□□ -1.12
TRR1YDR353W RTT107P38850 1070 aa8.04□□□□□ -1.12
TRR1YDR353W BUD27P43573 796 aaKnown RBP RIP-Chip data8.04□□□□□ -1.12not detected
TRR1YDR353W MDG1P53885 366 aa8.04□□□□□ -1.12
TRR1YDR353W AIM7Q12156 149 aa8.04□□□□□ -1.12
TRR1YDR353W ROM2P51862 1356 aaKnown RBP8.04□□□□□ -1.12
TRR1YDR353W RAD3P06839 778 aa8.03□□□□□ -1.12
TRR1YDR353W SUI2P20459 304 aaKnown RBP8.03□□□□□ -1.12
TRR1YDR353W PAP2P53632 584 aaKnown RBP8.03□□□□□ -1.12
TRR1YDR353W ERV41Q04651 352 aa8.03□□□□□ -1.12
TRR1YDR353W GLC3P32775 704 aa8.02□□□□□ -1.13
TRR1YDR353W RIO2P40160 425 aaKnown RBP8.02□□□□□ -1.13
TRR1YDR353W YPR109WQ06104 294 aa8.02□□□□□ -1.13
TRR1YDR353W TUM1Q08686 304 aaKnown RBP8.02□□□□□ -1.13
TRR1YDR353W YRR1Q12172 810 aa8.02□□□□□ -1.13
TRR1YDR353W YML133CQ03099 1374 aa8.01□□□□□ -1.13
TRR1YDR353W YLL067CQ07888 1374 aa8.01□□□□□ -1.13
TRR1YDR353W YLL066CQ99208 1374 aa8.01□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms