RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W VAN1P23642 535 aa6.62□□□□□ -1.35
HSP42YDR171W TPS3P38426 1054 aaKnown RBP6.61□□□□□ -1.35
HSP42YDR171W SUM1P46676 1062 aa6.6□□□□□ -1.35
HSP42YDR171W GCR2Q01722 534 aa6.6□□□□□ -1.35
HSP42YDR171W PUN1Q06991 263 aa6.6□□□□□ -1.35
HSP42YDR171W PUF6Q04373 656 aaKnown RBP6.59□□□□□ -1.35
HSP42YDR171W TRS33Q99394 268 aa6.59□□□□□ -1.35
HSP42YDR171W UBP1P25037 809 aa6.58□□□□□ -1.36
HSP42YDR171W ALA1P40825 983 aaKnown RBP6.58□□□□□ -1.36
HSP42YDR171W NUP85P46673 744 aa6.58□□□□□ -1.36
HSP42YDR171W CWC15Q03772 175 aaKnown RBP6.58□□□□□ -1.36
HSP42YDR171W CDC3P32457 520 aaKnown RBP6.57□□□□□ -1.36
HSP42YDR171W SUV3P32580 737 aa6.57□□□□□ -1.36
HSP42YDR171W YJR098CP47139 656 aa6.57□□□□□ -1.36
HSP42YDR171W LSC2P53312 427 aa6.57□□□□□ -1.36
HSP42YDR171W YPQ2Q06328 317 aa6.57□□□□□ -1.36
HSP42YDR171W NGR1P32831 672 aaKnown RBP6.56□□□□□ -1.36
HSP42YDR171W ALD4P46367 519 aaKnown RBP6.56□□□□□ -1.36
HSP42YDR171W SSN3P39073 555 aa6.55□□□□□ -1.36
HSP42YDR171W CWH41P53008 833 aa6.55□□□□□ -1.36
HSP42YDR171W PNP1Q05788 311 aa6.55□□□□□ -1.36
HSP42YDR171W SRS2P12954 1174 aa6.54□□□□□ -1.36
HSP42YDR171W FOX2Q02207 900 aaKnown RBP6.54□□□□□ -1.36
HSP42YDR171W TCB1Q12466 1186 aa6.54□□□□□ -1.36
HSP42YDR171W OPT2Q06593 877 aa6.53□□□□□ -1.36
HSP42YDR171W MCM1P11746 286 aa6.52□□□□□ -1.37
HSP42YDR171W JJJ2P46997 583 aa6.52□□□□□ -1.37
HSP42YDR171W MSN5P52918 1224 aa6.52□□□□□ -1.37
HSP42YDR171W KAR5Q04746 504 aa6.52□□□□□ -1.37
HSP42YDR171W HAT1Q12341 374 aa6.52□□□□□ -1.37
HSP42YDR171W TY1A-DR3Q12441 440 aa6.52□□□□□ -1.37
HSP42YDR171W AHP1P38013 176 aaKnown RBP6.51□□□□□ -1.37
HSP42YDR171W YNL165WP53891 406 aa6.51□□□□□ -1.37
HSP42YDR171W CAB1Q04430 367 aa6.51□□□□□ -1.37
HSP42YDR171W SHM1P37292 490 aaPredicted RBP6.5□□□□□ -1.37
HSP42YDR171W BOL3P39724 118 aa6.5□□□□□ -1.37
HSP42YDR171W Q0182Q9ZZW1 134 aa6.5□□□□□ -1.37
HSP42YDR171W MLF3P32047 452 aa6.49□□□□□ -1.37
HSP42YDR171W MET22P32179 357 aa6.49□□□□□ -1.37
HSP42YDR171W DAL1P32375 460 aa6.49□□□□□ -1.37
HSP42YDR171W SLA1P32790 1244 aa6.49□□□□□ -1.37
HSP42YDR171W YBR197CP38306 217 aa6.49□□□□□ -1.37
HSP42YDR171W HXT5P38695 592 aa6.49□□□□□ -1.37
HSP42YDR171W YLR346CQ06139 101 aa6.49□□□□□ -1.37
HSP42YDR171W FUR4P05316 633 aaKnown RBP6.48□□□□□ -1.37
HSP42YDR171W ISC10P32645 267 aa6.48□□□□□ -1.37
HSP42YDR171W VTC4P47075 721 aa6.48□□□□□ -1.37
HSP42YDR171W UBP2Q01476 1272 aa6.48□□□□□ -1.37
HSP42YDR171W YML020WQ03722 664 aa6.48□□□□□ -1.37
HSP42YDR171W YDR444WQ04093 687 aa6.48□□□□□ -1.37
HSP42YDR171W IRE1P32361 1115 aa6.47□□□□□ -1.37
HSP42YDR171W LCB5Q06147 687 aaKnown RBP6.47□□□□□ -1.37
HSP42YDR171W RRN6P32786 894 aa6.46□□□□□ -1.38
HSP42YDR171W SCD5P34758 872 aa6.46□□□□□ -1.38
HSP42YDR171W GLY1P37303 387 aaKnown RBP6.46□□□□□ -1.38
HSP42YDR171W SCW11P53189 542 aa6.46□□□□□ -1.38
HSP42YDR171W YBL113CQ7M4S9 792 aa6.46□□□□□ -1.38
HSP42YDR171W RPS31P05759 152 aaKnown RBP6.45□□□□□ -1.38
HSP42YDR171W SSF1P38789 453 aaPredicted RBP6.45□□□□□ -1.38
HSP42YDR171W ERP5P38819 212 aa6.45□□□□□ -1.38
HSP42YDR171W TY1A-BLQ12266 440 aa6.45□□□□□ -1.38
HSP42YDR171W CDC19P00549 500 aaKnown RBP6.44□□□□□ -1.38
HSP42YDR171W BOI1P38041 980 aaKnown RBP6.44□□□□□ -1.38
HSP42YDR171W GLO3P38682 493 aaKnown RBP6.44□□□□□ -1.38
HSP42YDR171W PSH1Q12161 406 aa6.44□□□□□ -1.38
HSP42YDR171W MRPL33P20084 86 aa6.43□□□□□ -1.38
HSP42YDR171W PDC6P26263 563 aaKnown RBP6.43□□□□□ -1.38
HSP42YDR171W GRS1P38088 690 aaKnown RBP6.43□□□□□ -1.38
HSP42YDR171W OSH7P38755 437 aa6.43□□□□□ -1.38
HSP42YDR171W RGA1P39083 1007 aa6.43□□□□□ -1.38
HSP42YDR171W YTA6P40328 754 aa6.43□□□□□ -1.38
HSP42YDR171W GAR1P28007 205 aaKnown RBP6.42□□□□□ -1.38
HSP42YDR171W QDR1P40475 563 aa6.42□□□□□ -1.38
HSP42YDR171W TRL1P09880 827 aaKnown RBP6.41□□□□□ -1.38
HSP42YDR171W RPB10P22139 70 aa6.41□□□□□ -1.38
HSP42YDR171W VMA3P25515 160 aa6.41□□□□□ -1.38
HSP42YDR171W QDR2P40474 542 aa6.41□□□□□ -1.38
HSP42YDR171W UBP15P50101 1230 aa6.41□□□□□ -1.38
HSP42YDR171W MTO1P53070 669 aa6.41□□□□□ -1.38
HSP42YDR171W UTP4Q06679 776 aaKnown RBP6.41□□□□□ -1.38
HSP42YDR171W LSO1Q3E827 93 aa6.41□□□□□ -1.38
HSP42YDR171W ALD2P47771 506 aa6.4□□□□□ -1.38
HSP42YDR171W SUT1P53032 299 aaKnown RBP6.4□□□□□ -1.38
HSP42YDR171W ATG1P53104 897 aa6.4□□□□□ -1.38
HSP42YDR171W NAM8Q00539 523 aaKnown RBP6.4□□□□□ -1.38
HSP42YDR171W MDJ2P42834 146 aa6.38□□□□□ -1.39
HSP42YDR171W ROG3P43602 733 aa6.38□□□□□ -1.39
HSP42YDR171W CAF120P53836 1060 aa6.38□□□□□ -1.39
HSP42YDR171W NOP8Q08287 484 aaPredicted RBP6.38□□□□□ -1.39
HSP42YDR171W LEU1P07264 779 aaKnown RBP6.37□□□□□ -1.39
HSP42YDR171W KTR2P33550 425 aa6.37□□□□□ -1.39
HSP42YDR171W YIR007WP40566 764 aa6.37□□□□□ -1.39
HSP42YDR171W KAP122P32767 1081 aa6.36□□□□□ -1.39
HSP42YDR171W LDH1P38139 375 aa6.36□□□□□ -1.39
HSP42YDR171W TY1A-MR1Q04215 440 aa6.36□□□□□ -1.39
HSP42YDR171W APC11Q12157 165 aa6.36□□□□□ -1.39
HSP42YDR171W STB3Q12427 513 aa6.36□□□□□ -1.39
HSP42YDR171W MRPL16P38064 232 aa6.35□□□□□ -1.39
HSP42YDR171W YHL050CP38721 697 aa6.35□□□□□ -1.39
HSP42YDR171W DYS1P38791 387 aa6.35□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms