RNA–Protein interactions for RNA: YDR085C

AFR1, Transcript of Protein required for pheromone-induced projection (shmoo) formation, yeastyeast

Gene AFR1, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFR1YDR085C GAL2P13181 574 aa5.64□□□□□ -1.51
AFR1YDR085C ACO2P39533 789 aa5.64□□□□□ -1.51
AFR1YDR085C YDL176WQ12027 708 aa5.64□□□□□ -1.51
AFR1YDR085C RPS6AP0CX37 236 aaKnown RBP5.64□□□□□ -1.51
AFR1YDR085C RPS6BP0CX38 236 aaPredicted RBP5.64□□□□□ -1.51
AFR1YDR085C GBP2P25555 427 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
AFR1YDR085C NTH2P35172 780 aa5.64□□□□□ -1.51
AFR1YDR085C MSN5P52918 1224 aa5.64□□□□□ -1.51
AFR1YDR085C HAP4P14064 554 aa5.63□□□□□ -1.51
AFR1YDR085C OSH7P38755 437 aa5.63□□□□□ -1.51
AFR1YDR085C PUP1P25043 261 aa5.62□□□□□ -1.51
AFR1YDR085C YPQ2Q06328 317 aa5.62□□□□□ -1.51
AFR1YDR085C SSA4P22202 642 aaKnown RBP5.62□□□□□ -1.51
AFR1YDR085C SLA1P32790 1244 aa5.62□□□□□ -1.51
AFR1YDR085C CAF120P53836 1060 aa5.62□□□□□ -1.51
AFR1YDR085C ECM23Q02710 187 aa5.62□□□□□ -1.51
AFR1YDR085C ROM1P53046 1155 aa5.61□□□□□ -1.51
AFR1YDR085C GAS4Q08271 471 aa5.61□□□□□ -1.51
AFR1YDR085C CDC19P00549 500 aaKnown RBP5.6□□□□□ -1.51
AFR1YDR085C YIR007WP40566 764 aa5.6□□□□□ -1.51
AFR1YDR085C ALA1P40825 983 aaKnown RBP5.6□□□□□ -1.51
AFR1YDR085C YPL062WQ02781 134 aa5.6□□□□□ -1.51
AFR1YDR085C TY1A-DR3Q12441 440 aa5.6□□□□□ -1.51
AFR1YDR085C CYT1P07143 309 aa5.59□□□□□ -1.51
AFR1YDR085C ROG3P43602 733 aa5.58□□□□□ -1.52
AFR1YDR085C NAM8Q00539 523 aaKnown RBP5.58□□□□□ -1.52
AFR1YDR085C NOB1Q08444 459 aaKnown RBP5.58□□□□□ -1.52
AFR1YDR085C MCM1P11746 286 aa5.58□□□□□ -1.52
AFR1YDR085C UBP1P25037 809 aa5.58□□□□□ -1.52
AFR1YDR085C JJJ2P46997 583 aa5.58□□□□□ -1.52
AFR1YDR085C TY1A-MR1Q04215 440 aa5.58□□□□□ -1.52
AFR1YDR085C SHM1P37292 490 aaPredicted RBP5.57□□□□□ -1.52
AFR1YDR085C AHP1P38013 176 aaKnown RBP5.57□□□□□ -1.52
AFR1YDR085C UBX7P38349 436 aa5.57□□□□□ -1.52
AFR1YDR085C UBP15P50101 1230 aa5.57□□□□□ -1.52
AFR1YDR085C SUB2Q07478 446 aaKnown RBP5.57□□□□□ -1.52
AFR1YDR085C YML083CQ04526 418 aa5.56□□□□□ -1.52
AFR1YDR085C CCP1P00431 361 aa5.56□□□□□ -1.52
AFR1YDR085C IRE1P32361 1115 aa5.56□□□□□ -1.52
AFR1YDR085C RPS31P05759 152 aaKnown RBP5.55□□□□□ -1.52
AFR1YDR085C VAN1P23642 535 aa5.54□□□□□ -1.52
AFR1YDR085C NGR1P32831 672 aaKnown RBP5.54□□□□□ -1.52
AFR1YDR085C YNL165WP53891 406 aa5.54□□□□□ -1.52
AFR1YDR085C RGA1P39083 1007 aa5.54□□□□□ -1.52
AFR1YDR085C TAF7Q05021 590 aa5.54□□□□□ -1.52
AFR1YDR085C PSH1Q12161 406 aa5.52□□□□□ -1.53
AFR1YDR085C TRS33Q99394 268 aa5.52□□□□□ -1.53
AFR1YDR085C PDC6P26263 563 aaKnown RBP5.51□□□□□ -1.53
AFR1YDR085C SUV3P32580 737 aa5.51□□□□□ -1.53
AFR1YDR085C CUZ1P53899 274 aa5.51□□□□□ -1.53
AFR1YDR085C PUF6Q04373 656 aaKnown RBP5.51□□□□□ -1.53
AFR1YDR085C Q0182Q9ZZW1 134 aa5.51□□□□□ -1.53
AFR1YDR085C HXT5P38695 592 aa5.5□□□□□ -1.53
AFR1YDR085C MLF3P32047 452 aa5.49□□□□□ -1.53
AFR1YDR085C HPF1Q05164 967 aa5.49□□□□□ -1.53
AFR1YDR085C DIT1P21623 536 aa5.49□□□□□ -1.53
AFR1YDR085C CWH41P53008 833 aa5.49□□□□□ -1.53
AFR1YDR085C CWC15Q03772 175 aaKnown RBP5.49□□□□□ -1.53
AFR1YDR085C LEU1P07264 779 aaKnown RBP5.48□□□□□ -1.53
AFR1YDR085C SCD5P34758 872 aa5.48□□□□□ -1.53
AFR1YDR085C ALD2P47771 506 aa5.48□□□□□ -1.53
AFR1YDR085C UTP4Q06679 776 aaKnown RBP5.48□□□□□ -1.53
AFR1YDR085C YTA6P40328 754 aa5.47□□□□□ -1.53
AFR1YDR085C YGR035CP53222 116 aa5.47□□□□□ -1.53
AFR1YDR085C YMR265CQ03508 461 aaKnown RBP5.47□□□□□ -1.53
AFR1YDR085C CAB1Q04430 367 aa5.47□□□□□ -1.53
AFR1YDR085C PUN1Q06991 263 aa5.47□□□□□ -1.53
AFR1YDR085C MRPL16P38064 232 aa5.46□□□□□ -1.54
AFR1YDR085C ALD4P46367 519 aaKnown RBP5.46□□□□□ -1.54
AFR1YDR085C SRS2P12954 1174 aa5.45□□□□□ -1.54
AFR1YDR085C LYS5P50113 272 aa5.45□□□□□ -1.54
AFR1YDR085C KRE33P53914 1056 aaKnown RBP5.45□□□□□ -1.54
AFR1YDR085C YBR197CP38306 217 aa5.45□□□□□ -1.54
AFR1YDR085C TPS3P38426 1054 aaKnown RBP5.45□□□□□ -1.54
AFR1YDR085C CEM1P39525 442 aa5.45□□□□□ -1.54
AFR1YDR085C SYT1Q06836 1226 aa5.45□□□□□ -1.54
AFR1YDR085C YDR461C-AQ2V2P7 80 aa5.45□□□□□ -1.54
AFR1YDR085C SSA1P10591 642 aaKnown RBP5.44□□□□□ -1.54
AFR1YDR085C SPR3P41901 512 aa5.44□□□□□ -1.54
AFR1YDR085C ADE12P80210 433 aaKnown RBP5.44□□□□□ -1.54
AFR1YDR085C STB3Q12427 513 aa5.44□□□□□ -1.54
AFR1YDR085C DPH6Q12429 685 aa5.44□□□□□ -1.54
AFR1YDR085C RGP1P16664 663 aa5.43□□□□□ -1.54
AFR1YDR085C JJJ3P47138 172 aa5.43□□□□□ -1.54
AFR1YDR085C FOX2Q02207 900 aaKnown RBP5.43□□□□□ -1.54
AFR1YDR085C PNP1Q05788 311 aa5.43□□□□□ -1.54
AFR1YDR085C TRK2P28584 889 aa5.43□□□□□ -1.54
AFR1YDR085C MTO1P53070 669 aa5.43□□□□□ -1.54
AFR1YDR085C MRPL33P20084 86 aa5.42□□□□□ -1.54
AFR1YDR085C KAP122P32767 1081 aa5.42□□□□□ -1.54
AFR1YDR085C RPL34AP87262 121 aaPredicted RBP5.42□□□□□ -1.54
AFR1YDR085C ISC10P32645 267 aa5.41□□□□□ -1.54
AFR1YDR085C QDR2P40474 542 aa5.41□□□□□ -1.54
AFR1YDR085C SKP1P52286 194 aa5.41□□□□□ -1.54
AFR1YDR085C RPC31P17890 251 aa5.4□□□□□ -1.55
AFR1YDR085C FPS1P23900 669 aa5.4□□□□□ -1.55
AFR1YDR085C VMA3P25515 160 aa5.4□□□□□ -1.55
AFR1YDR085C RPP1AP05318 106 aaPredicted RBP5.39□□□□□ -1.55
AFR1YDR085C CUS1Q02554 436 aaPredicted RBP5.39□□□□□ -1.55
AFR1YDR085C GEF1P37020 779 aa5.38□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 46 ms