RNA–Protein interactions for RNA: YDL213C

NOP6, Transcript of rRNA-binding protein required for 40S ribosomal subunit biogenesis, yeast

Gene NOP6, Length 678 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOP6	YDL213C	SSB1	P11484	613 aa	Known RBP	5.04	□□□□□ -1.6
NOP6	YDL213C	YDJ1	P25491	409 aa	Known RBP	5.04	□□□□□ -1.6
NOP6	YDL213C	TPD3	P31383	635 aa		5.04	□□□□□ -1.6
NOP6	YDL213C	SSB2	P40150	613 aa	Known RBP	5.04	□□□□□ -1.6
NOP6	YDL213C	NOP2	P40991	618 aa	Known RBP	5.04	□□□□□ -1.6
NOP6	YDL213C	FPK1	P53739	893 aa		5.04	□□□□□ -1.6
NOP6	YDL213C	YMR196W	Q04336	1088 aa		5.04	□□□□□ -1.6
NOP6	YDL213C	CIT2	P08679	460 aa		5.03	□□□□□ -1.6
NOP6	YDL213C	SIT4	P20604	311 aa		5.03	□□□□□ -1.6
NOP6	YDL213C	SRP40	P32583	406 aa	Predicted RBP	5.03	□□□□□ -1.6
NOP6	YDL213C	GRS1	P38088	690 aa	Known RBP	5.03	□□□□□ -1.6
NOP6	YDL213C	MGE1	P38523	228 aa		5.03	□□□□□ -1.6
NOP6	YDL213C	TPM2	P40414	161 aa		5.03	□□□□□ -1.6
NOP6	YDL213C	YPP1	P46951	817 aa		5.03	□□□□□ -1.6
NOP6	YDL213C	KXD1	P53158	218 aa		5.03	□□□□□ -1.6
NOP6	YDL213C	NIS1	P53939	407 aa		5.03	□□□□□ -1.6
NOP6	YDL213C	ECM23	Q02710	187 aa		5.03	□□□□□ -1.6
NOP6	YDL213C	ESS1	P22696	170 aa		5.02	□□□□□ -1.61
NOP6	YDL213C	YKL091C	P33324	310 aa	Known RBP	5.02	□□□□□ -1.61
NOP6	YDL213C	THI12	P42883	340 aa		5.02	□□□□□ -1.61
NOP6	YDL213C	THI5	P43534	340 aa		5.02	□□□□□ -1.61
NOP6	YDL213C	HXT10	P43581	546 aa		5.02	□□□□□ -1.61
NOP6	YDL213C	IOC3	P43596	787 aa		5.02	□□□□□ -1.61
NOP6	YDL213C	THI11	P47183	340 aa		5.02	□□□□□ -1.61
NOP6	YDL213C	ATG1	P53104	897 aa		5.02	□□□□□ -1.61
NOP6	YDL213C	SYH1	Q02875	849 aa	Known RBP	5.02	□□□□□ -1.61
NOP6	YDL213C	CWC15	Q03772	175 aa	Known RBP	5.02	□□□□□ -1.61
NOP6	YDL213C	POB3	Q04636	552 aa	Known RBP	5.02	□□□□□ -1.61
NOP6	YDL213C	OPT2	Q06593	877 aa		5.02	□□□□□ -1.61
NOP6	YDL213C	THI13	Q07748	340 aa		5.02	□□□□□ -1.61
NOP6	YDL213C	ARG8	P18544	423 aa		5.01	□□□□□ -1.61
NOP6	YDL213C	TRK2	P28584	889 aa		5.01	□□□□□ -1.61
NOP6	YDL213C	TPS3	P38426	1054 aa	Known RBP	5.01	□□□□□ -1.61
NOP6	YDL213C	VAC8	P39968	578 aa		5.01	□□□□□ -1.61
NOP6	YDL213C	YJL049W	P47048	450 aa		5.01	□□□□□ -1.61
NOP6	YDL213C	YGL081W	P53156	320 aa		5.01	□□□□□ -1.61
NOP6	YDL213C	GAL2	P13181	574 aa		5	□□□□□ -1.61
NOP6	YDL213C	YJU3	P28321	313 aa		5	□□□□□ -1.61
NOP6	YDL213C	MET1	P36150	593 aa		5	□□□□□ -1.61
NOP6	YDL213C	UBX7	P38349	436 aa		5	□□□□□ -1.61
NOP6	YDL213C	ZDS1	P50111	915 aa	Known RBP	5	□□□□□ -1.61
NOP6	YDL213C	ALD3	P54114	506 aa		5	□□□□□ -1.61
NOP6	YDL213C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5	□□□□□ -1.61	not detected
NOP6	YDL213C	RPN4	Q03465	531 aa		5	□□□□□ -1.61
NOP6	YDL213C	PDC1	P06169	563 aa	Known RBP	4.99	□□□□□ -1.61
NOP6	YDL213C	RDS2	P19541	446 aa	Known RBP	4.99	□□□□□ -1.61
NOP6	YDL213C	UGA3	P26370	528 aa		4.99	□□□□□ -1.61
NOP6	YDL213C	PMC1	P38929	1173 aa	Predicted RBP	4.99	□□□□□ -1.61
NOP6	YDL213C	PTK2	P47116	818 aa	Known RBP	4.99	□□□□□ -1.61
NOP6	YDL213C	PUF6	Q04373	656 aa	Known RBP	4.99	□□□□□ -1.61
NOP6	YDL213C	NSE3	Q05541	303 aa		4.99	□□□□□ -1.61
NOP6	YDL213C	SCJ1	P25303	377 aa		4.98	□□□□□ -1.61
NOP6	YDL213C	GRX4	P32642	244 aa		4.98	□□□□□ -1.61
NOP6	YDL213C	NAF1	P53919	492 aa	Known RBP	4.98	□□□□□ -1.61
NOP6	YDL213C	ALD6	P54115	500 aa	Known RBP	4.98	□□□□□ -1.61
NOP6	YDL213C	YLR346C	Q06139	101 aa		4.98	□□□□□ -1.61
NOP6	YDL213C	MNL2	Q12205	849 aa		4.98	□□□□□ -1.61
NOP6	YDL213C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
NOP6	YDL213C	MNN4	P36044	1178 aa		4.97	□□□□□ -1.61
NOP6	YDL213C	RSC30	P38781	883 aa		4.97	□□□□□ -1.61
NOP6	YDL213C	KTR7	P40504	517 aa		4.97	□□□□□ -1.61
NOP6	YDL213C	NUT2	Q06213	157 aa		4.97	□□□□□ -1.61
NOP6	YDL213C	YOL057W	Q08225	711 aa		4.97	□□□□□ -1.61
NOP6	YDL213C	PIN2	Q12057	282 aa		4.97	□□□□□ -1.61
NOP6	YDL213C	MET4	P32389	672 aa		4.96	□□□□□ -1.62
NOP6	YDL213C	BOL3	P39724	118 aa		4.96	□□□□□ -1.62
NOP6	YDL213C	FYV10	P40492	516 aa		4.96	□□□□□ -1.62
NOP6	YDL213C	BUD6	P41697	788 aa		4.96	□□□□□ -1.62
NOP6	YDL213C	ACF4	P47129	309 aa		4.96	□□□□□ -1.62
NOP6	YDL213C	VPS16	Q03308	798 aa		4.96	□□□□□ -1.62
NOP6	YDL213C	SSF2	Q12153	453 aa	Predicted RBP	4.96	□□□□□ -1.62
NOP6	YDL213C	SRF1	Q12516	437 aa		4.96	□□□□□ -1.62
NOP6	YDL213C	GLY1	P37303	387 aa	Known RBP	4.95	□□□□□ -1.62
NOP6	YDL213C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
NOP6	YDL213C	YIR007W	P40566	764 aa		4.95	□□□□□ -1.62
NOP6	YDL213C	MAD1	P40957	749 aa		4.95	□□□□□ -1.62
NOP6	YDL213C	NUP85	P46673	744 aa		4.95	□□□□□ -1.62
NOP6	YDL213C	YGR035C	P53222	116 aa		4.95	□□□□□ -1.62
NOP6	YDL213C	RMD1	Q03441	430 aa		4.95	□□□□□ -1.62
NOP6	YDL213C	PNP1	Q05788	311 aa		4.95	□□□□□ -1.62
NOP6	YDL213C	MCM16	Q12262	181 aa		4.95	□□□□□ -1.62
NOP6	YDL213C	YGR161W-C	Q3E744	92 aa		4.95	□□□□□ -1.62
NOP6	YDL213C	FRT1	Q99332	602 aa		4.95	□□□□□ -1.62
NOP6	YDL213C	CLN2	P20438	545 aa		4.94	□□□□□ -1.62
NOP6	YDL213C	MRT4	P33201	236 aa	Known RBP	4.94	□□□□□ -1.62
NOP6	YDL213C	HPF1	Q05164	967 aa		4.94	□□□□□ -1.62
NOP6	YDL213C	YDL121C	Q07541	149 aa		4.94	□□□□□ -1.62
NOP6	YDL213C	WRS1	Q12109	432 aa	Known RBP	4.94	□□□□□ -1.62
NOP6	YDL213C	SLY41	P22215	453 aa		4.93	□□□□□ -1.62
NOP6	YDL213C	PHO87	P25360	923 aa		4.93	□□□□□ -1.62
NOP6	YDL213C	KIP2	P28743	706 aa		4.93	□□□□□ -1.62
NOP6	YDL213C	MNN1	P39106	762 aa		4.93	□□□□□ -1.62
NOP6	YDL213C	UTP14	Q04500	899 aa	Known RBP	4.93	□□□□□ -1.62
NOP6	YDL213C	YOR131C	Q12486	218 aa		4.93	□□□□□ -1.62
NOP6	YDL213C	FUR4	P05316	633 aa	Known RBP	4.92	□□□□□ -1.62
NOP6	YDL213C	SRS2	P12954	1174 aa		4.92	□□□□□ -1.62
NOP6	YDL213C	VMA4	P22203	233 aa	Known RBP	4.92	□□□□□ -1.62
NOP6	YDL213C	GLO3	P38682	493 aa	Known RBP	4.92	□□□□□ -1.62
NOP6	YDL213C	QDR1	P40475	563 aa		4.92	□□□□□ -1.62
NOP6	YDL213C	TY4A-J	P47023	414 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 45.9 ms