RNA–Protein interactions for RNA: YDL156W

CMR1, Transcript of DNA-binding protein with preference for UV-damaged DNA, yeast

Gene CMR1, Length 1,569 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR1	YDL156W	MCM16	Q12262	181 aa		7.73	□□□□□ -1.17
CMR1	YDL156W	FUR4	P05316	633 aa	Known RBP	7.72	□□□□□ -1.17
CMR1	YDL156W	RAD2	P07276	1031 aa		7.72	□□□□□ -1.17
CMR1	YDL156W	RPA135	P22138	1203 aa	Known RBP	7.72	□□□□□ -1.17
CMR1	YDL156W	GLO3	P38682	493 aa	Known RBP	7.72	□□□□□ -1.17
CMR1	YDL156W	RPT2	P40327	437 aa	Known RBP	7.72	□□□□□ -1.17
CMR1	YDL156W	QDR1	P40475	563 aa		7.72	□□□□□ -1.17
CMR1	YDL156W	MSH4	P40965	878 aa	Predicted RBP	7.72	□□□□□ -1.17
CMR1	YDL156W	EMP47	P43555	445 aa		7.72	□□□□□ -1.17
CMR1	YDL156W	RGA2	Q06407	1009 aa		7.72	□□□□□ -1.17
CMR1	YDL156W	PWP2	P25635	923 aa	Known RBP	7.71	□□□□□ -1.17
CMR1	YDL156W	SEC6	P32844	805 aa		7.71	□□□□□ -1.17
CMR1	YDL156W	MFT1	P33441	392 aa	Known RBP	7.71	□□□□□ -1.17
CMR1	YDL156W	NOC2	P39744	710 aa	Known RBP	7.71	□□□□□ -1.17
CMR1	YDL156W	NKP1	Q12493	238 aa		7.71	□□□□□ -1.17
CMR1	YDL156W	PTC2	P39966	464 aa	Known RBP	7.71	□□□□□ -1.18
CMR1	YDL156W	VPS27	P40343	622 aa	Known RBP	7.71	□□□□□ -1.18
CMR1	YDL156W	DNM1	P54861	757 aa		7.71	□□□□□ -1.18
CMR1	YDL156W	ESF1	Q06344	628 aa	Known RBP	7.71	□□□□□ -1.18
CMR1	YDL156W	AI4	P03878	556 aa		7.7	□□□□□ -1.18
CMR1	YDL156W	SRS2	P12954	1174 aa		7.7	□□□□□ -1.18
CMR1	YDL156W	MIP1	P15801	1254 aa		7.7	□□□□□ -1.18
CMR1	YDL156W	VPS24	P36095	224 aa	Known RBP	7.7	□□□□□ -1.18
CMR1	YDL156W	ENV9	Q08651	330 aa		7.7	□□□□□ -1.18
CMR1	YDL156W	MPH3	P0CE00	602 aa		7.69	□□□□□ -1.18
CMR1	YDL156W	PHO87	P25360	923 aa		7.69	□□□□□ -1.18
CMR1	YDL156W	DPB3	P27344	201 aa		7.69	□□□□□ -1.18
CMR1	YDL156W	MPE1	P35728	441 aa	Known RBP	7.69	□□□□□ -1.18
CMR1	YDL156W	RTT106	P40161	455 aa		7.69	□□□□□ -1.18
CMR1	YDL156W	BNI4	P53858	892 aa		7.69	□□□□□ -1.18
CMR1	YDL156W	HAP4	P14064	554 aa		7.68	□□□□□ -1.18
CMR1	YDL156W	ISW1	P38144	1129 aa		7.68	□□□□□ -1.18
CMR1	YDL156W	YEN1	P40028	759 aa		7.68	□□□□□ -1.18
CMR1	YDL156W	HIF1	Q12373	385 aa		7.68	□□□□□ -1.18
CMR1	YDL156W	GAP1	P19145	602 aa	Predicted RBP	7.67	□□□□□ -1.18
CMR1	YDL156W	POL5	P39985	1022 aa	Known RBP	7.67	□□□□□ -1.18
CMR1	YDL156W	ITC1	P53125	1264 aa		7.67	□□□□□ -1.18
CMR1	YDL156W	YML082W	Q04533	649 aa	Known RBP	7.67	□□□□□ -1.18
CMR1	YDL156W	SPR28	Q04921	423 aa		7.67	□□□□□ -1.18
CMR1	YDL156W	YPR109W	Q06104	294 aa		7.67	□□□□□ -1.18
CMR1	YDL156W	MRC1	P25588	1096 aa		7.67	□□□□□ -1.18
CMR1	YDL156W	MCM2	P29469	868 aa		7.67	□□□□□ -1.18
CMR1	YDL156W	NST1	P53935	1240 aa		7.67	□□□□□ -1.18
CMR1	YDL156W	FUI1	P38196	639 aa		7.66	□□□□□ -1.18
CMR1	YDL156W	NUP82	P40368	713 aa		7.66	□□□□□ -1.18
CMR1	YDL156W	YFR016C	P43597	1233 aa	Known RBP	7.66	□□□□□ -1.18
CMR1	YDL156W	RPS0B	P46654	252 aa	Known RBP	7.66	□□□□□ -1.18
CMR1	YDL156W	SRC1	Q03707	834 aa		7.66	□□□□□ -1.18
CMR1	YDL156W	COG4	Q06096	861 aa		7.66	□□□□□ -1.18
CMR1	YDL156W	CSC1	Q06538	782 aa		7.66	□□□□□ -1.18
CMR1	YDL156W	PUN1	Q06991	263 aa		7.66	□□□□□ -1.18
CMR1	YDL156W	THS1	P04801	734 aa	Known RBP	7.65	□□□□□ -1.18
CMR1	YDL156W	MNR2	P35724	969 aa		7.65	□□□□□ -1.18
CMR1	YDL156W	RGA1	P39083	1007 aa		7.65	□□□□□ -1.18
CMR1	YDL156W	ESF2	P53743	316 aa	Known RBP	7.65	□□□□□ -1.18
CMR1	YDL156W	VMS1	Q04311	632 aa	Known RBP	7.65	□□□□□ -1.18
CMR1	YDL156W	RPT1	P33299	467 aa	Known RBP	7.64	□□□□□ -1.19
CMR1	YDL156W	PAF1	P38351	445 aa		7.64	□□□□□ -1.19
CMR1	YDL156W	ROM1	P53046	1155 aa		7.64	□□□□□ -1.19
CMR1	YDL156W	SOL3	P38858	249 aa		7.63	□□□□□ -1.19
CMR1	YDL156W	PHO4	P07270	312 aa	Known RBP	7.63	□□□□□ -1.19
CMR1	YDL156W	SLY41	P22215	453 aa		7.63	□□□□□ -1.19
CMR1	YDL156W	TRX2	P22803	104 aa	Known RBP	7.63	□□□□□ -1.19
CMR1	YDL156W	HUL5	P53119	910 aa		7.63	□□□□□ -1.19
CMR1	YDL156W	PPM2	Q08282	695 aa		7.63	□□□□□ -1.19
CMR1	YDL156W	PEP7	P32609	515 aa		7.62	□□□□□ -1.19
CMR1	YDL156W	RPS0A	P32905	252 aa	Known RBP	7.62	□□□□□ -1.19
CMR1	YDL156W	BOI1	P38041	980 aa	Known RBP	7.62	□□□□□ -1.19
CMR1	YDL156W	CRP1	P38845	465 aa	Known RBP	7.62	□□□□□ -1.19
CMR1	YDL156W	ATG3	P40344	310 aa		7.62	□□□□□ -1.19
CMR1	YDL156W	SPR3	P41901	512 aa		7.62	□□□□□ -1.19
CMR1	YDL156W	ACS2	P52910	683 aa	Known RBP	7.62	□□□□□ -1.19
CMR1	YDL156W	CWC24	P53769	259 aa		7.62	□□□□□ -1.19
CMR1	YDL156W	GAS4	Q08271	471 aa		7.62	□□□□□ -1.19
CMR1	YDL156W	PHO8	P11491	566 aa		7.61	□□□□□ -1.19
CMR1	YDL156W	ISF1	P32488	338 aa		7.61	□□□□□ -1.19
CMR1	YDL156W	TAT2	P38967	592 aa		7.61	□□□□□ -1.19
CMR1	YDL156W	IES1	P43579	692 aa		7.61	□□□□□ -1.19
CMR1	YDL156W	RTF1	P53064	558 aa		7.61	□□□□□ -1.19
CMR1	YDL156W	TRS120	Q04183	1289 aa		7.61	□□□□□ -1.19
CMR1	YDL156W	LSO1	Q3E827	93 aa		7.61	□□□□□ -1.19
CMR1	YDL156W	RPP1B	P10622	106 aa	Known RBP	7.6	□□□□□ -1.19
CMR1	YDL156W	SRM1	P21827	482 aa		7.6	□□□□□ -1.19
CMR1	YDL156W	PET112	P33893	541 aa		7.6	□□□□□ -1.19
CMR1	YDL156W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	7.6	□□□□□ -1.19	not detected
CMR1	YDL156W	MTO1	P53070	669 aa		7.6	□□□□□ -1.19
CMR1	YDL156W	YLR125W	Q12138	136 aa		7.6	□□□□□ -1.19
CMR1	YDL156W	GRX1	P25373	110 aa	Known RBP	7.59	□□□□□ -1.19
CMR1	YDL156W	ENT2	Q05785	613 aa		7.59	□□□□□ -1.19
CMR1	YDL156W	RAD27	P26793	382 aa		7.59	□□□□□ -1.2
CMR1	YDL156W	RPN12	P32496	274 aa		7.59	□□□□□ -1.2
CMR1	YDL156W	GCD6	P32501	712 aa	Known RBP	7.59	□□□□□ -1.2
CMR1	YDL156W	CHZ1	P40019	153 aa	Predicted RBP	7.59	□□□□□ -1.2
CMR1	YDL156W	DAK2	P43550	591 aa		7.59	□□□□□ -1.2
CMR1	YDL156W	FOL1	P53848	824 aa		7.59	□□□□□ -1.2
CMR1	YDL156W	SVL3	Q03088	825 aa	Known RBP	7.59	□□□□□ -1.2
CMR1	YDL156W	MPC54	Q08550	464 aa		7.59	□□□□□ -1.2
CMR1	YDL156W	TFB4	Q12004	338 aa		7.59	□□□□□ -1.2
CMR1	YDL156W	TRM1	P15565	570 aa	Known RBP	7.58	□□□□□ -1.2
CMR1	YDL156W	TIM23	P32897	222 aa		7.58	□□□□□ -1.2

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms