RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W SWI5P08153 709 aa5.54□□□□□ -1.52
TSR1YDL060W RPS6AP0CX37 236 aaKnown RBP5.54□□□□□ -1.52
TSR1YDL060W RPS6BP0CX38 236 aaPredicted RBP5.54□□□□□ -1.52
TSR1YDL060W DAL1P32375 460 aa5.54□□□□□ -1.52
TSR1YDL060W ACO2P39533 789 aa5.54□□□□□ -1.52
TSR1YDL060W YPL062WQ02781 134 aa5.54□□□□□ -1.52
TSR1YDL060W PHO87P25360 923 aa5.53□□□□□ -1.52
TSR1YDL060W CPS1P27614 576 aa5.53□□□□□ -1.52
TSR1YDL060W VTC4P47075 721 aa5.53□□□□□ -1.52
TSR1YDL060W MSN5P52918 1224 aa5.53□□□□□ -1.52
TSR1YDL060W AIM44Q99299 758 aa5.53□□□□□ -1.52
TSR1YDL060W SSA4P22202 642 aaKnown RBP5.52□□□□□ -1.53
TSR1YDL060W TGL4P36165 910 aa5.52□□□□□ -1.53
TSR1YDL060W GAL2P13181 574 aa5.51□□□□□ -1.53
TSR1YDL060W SSN3P39073 555 aa5.51□□□□□ -1.53
TSR1YDL060W YIR007WP40566 764 aa5.51□□□□□ -1.53
TSR1YDL060W ECM23Q02710 187 aa5.51□□□□□ -1.53
TSR1YDL060W ACS2P52910 683 aaKnown RBP5.5□□□□□ -1.53
TSR1YDL060W GAS4Q08271 471 aa5.5□□□□□ -1.53
TSR1YDL060W CYT1P07143 309 aa5.5□□□□□ -1.53
TSR1YDL060W ROG3P43602 733 aa5.5□□□□□ -1.53
TSR1YDL060W YDL176WQ12027 708 aa5.5□□□□□ -1.53
TSR1YDL060W CDC19P00549 500 aaKnown RBP5.49□□□□□ -1.53
TSR1YDL060W UBP15P50101 1230 aa5.49□□□□□ -1.53
TSR1YDL060W YML020WQ03722 664 aa5.49□□□□□ -1.53
TSR1YDL060W TY1A-MR1Q04215 440 aa5.48□□□□□ -1.53
TSR1YDL060W VAN1P23642 535 aa5.48□□□□□ -1.53
TSR1YDL060W YTA6P40328 754 aa5.48□□□□□ -1.53
TSR1YDL060W JJJ2P46997 583 aa5.48□□□□□ -1.53
TSR1YDL060W NAP1P25293 417 aaKnown RBP5.47□□□□□ -1.53
TSR1YDL060W IRE1P32361 1115 aa5.47□□□□□ -1.53
TSR1YDL060W UBX7P38349 436 aa5.47□□□□□ -1.53
TSR1YDL060W RGA1P39083 1007 aa5.47□□□□□ -1.53
TSR1YDL060W CWH41P53008 833 aa5.47□□□□□ -1.53
TSR1YDL060W YGR035CP53222 116 aa5.47□□□□□ -1.53
TSR1YDL060W ORC1P54784 914 aaPredicted RBP5.47□□□□□ -1.53
TSR1YDL060W MCM1P11746 286 aa5.45□□□□□ -1.54
TSR1YDL060W SLA1P32790 1244 aa5.45□□□□□ -1.54
TSR1YDL060W TRS33Q99394 268 aa5.45□□□□□ -1.54
TSR1YDL060W YMR265CQ03508 461 aaKnown RBP5.44□□□□□ -1.54
TSR1YDL060W IOC4Q04213 475 aa5.44□□□□□ -1.54
TSR1YDL060W YPQ2Q06328 317 aa5.44□□□□□ -1.54
TSR1YDL060W ROM1P53046 1155 aa5.44□□□□□ -1.54
TSR1YDL060W NAM8Q00539 523 aaKnown RBP5.44□□□□□ -1.54
TSR1YDL060W PUP1P25043 261 aa5.43□□□□□ -1.54
TSR1YDL060W NOP8Q08287 484 aaPredicted RBP5.43□□□□□ -1.54
TSR1YDL060W TY1A-DR3Q12441 440 aa5.43□□□□□ -1.54
TSR1YDL060W CEM1P39525 442 aa5.43□□□□□ -1.54
TSR1YDL060W LYS5P50113 272 aa5.43□□□□□ -1.54
TSR1YDL060W HPF1Q05164 967 aa5.42□□□□□ -1.54
TSR1YDL060W Q0182Q9ZZW1 134 aa5.42□□□□□ -1.54
TSR1YDL060W CUZ1P53899 274 aa5.42□□□□□ -1.54
TSR1YDL060W UBP1P25037 809 aa5.41□□□□□ -1.54
TSR1YDL060W DIT1P21623 536 aa5.41□□□□□ -1.54
TSR1YDL060W NGR1P32831 672 aaKnown RBP5.41□□□□□ -1.54
TSR1YDL060W KRE33P53914 1056 aaKnown RBP5.41□□□□□ -1.54
TSR1YDL060W PDC6P26263 563 aaKnown RBP5.4□□□□□ -1.54
TSR1YDL060W SHM1P37292 490 aaPredicted RBP5.4□□□□□ -1.54
TSR1YDL060W DPH6Q12429 685 aa5.4□□□□□ -1.54
TSR1YDL060W SCD5P34758 872 aa5.4□□□□□ -1.55
TSR1YDL060W PUF6Q04373 656 aaKnown RBP5.4□□□□□ -1.55
TSR1YDL060W PUN1Q06991 263 aa5.4□□□□□ -1.55
TSR1YDL060W CCP1P00431 361 aa5.39□□□□□ -1.55
TSR1YDL060W RPP1AP05318 106 aaPredicted RBP5.39□□□□□ -1.55
TSR1YDL060W TRK2P28584 889 aa5.39□□□□□ -1.55
TSR1YDL060W MRPL16P38064 232 aa5.39□□□□□ -1.55
TSR1YDL060W PSH1Q12161 406 aa5.39□□□□□ -1.55
TSR1YDL060W MLF3P32047 452 aa5.38□□□□□ -1.55
TSR1YDL060W ADE12P80210 433 aaKnown RBP5.38□□□□□ -1.55
TSR1YDL060W SUB2Q07478 446 aaKnown RBP5.38□□□□□ -1.55
TSR1YDL060W STB3Q12427 513 aa5.38□□□□□ -1.55
TSR1YDL060W YML083CQ04526 418 aa5.38□□□□□ -1.55
TSR1YDL060W NOB1Q08444 459 aaKnown RBP5.38□□□□□ -1.55
TSR1YDL060W FPS1P23900 669 aa5.37□□□□□ -1.55
TSR1YDL060W YNL165WP53891 406 aa5.37□□□□□ -1.55
TSR1YDL060W RPL34AP87262 121 aaPredicted RBP5.37□□□□□ -1.55
TSR1YDL060W SSA1P10591 642 aaKnown RBP5.37□□□□□ -1.55
TSR1YDL060W GEF1P37020 779 aa5.37□□□□□ -1.55
TSR1YDL060W MTO1P53070 669 aa5.37□□□□□ -1.55
TSR1YDL060W RPS31P05759 152 aaKnown RBP5.36□□□□□ -1.55
TSR1YDL060W FOX2Q02207 900 aaKnown RBP5.36□□□□□ -1.55
TSR1YDL060W UTP4Q06679 776 aaKnown RBP5.36□□□□□ -1.55
TSR1YDL060W LEU1P07264 779 aaKnown RBP5.35□□□□□ -1.55
TSR1YDL060W YDR461C-AQ2V2P7 80 aa5.35□□□□□ -1.55
TSR1YDL060W SRS2P12954 1174 aa5.34□□□□□ -1.55
TSR1YDL060W RGP1P16664 663 aa5.34□□□□□ -1.55
TSR1YDL060W SYT1Q06836 1226 aa5.34□□□□□ -1.55
TSR1YDL060W ALD4P46367 519 aaKnown RBP5.34□□□□□ -1.56
TSR1YDL060W KAP122P32767 1081 aa5.33□□□□□ -1.56
TSR1YDL060W RRN6P32786 894 aa5.33□□□□□ -1.56
TSR1YDL060W HXT5P38695 592 aa5.33□□□□□ -1.56
TSR1YDL060W JJJ3P47138 172 aa5.33□□□□□ -1.56
TSR1YDL060W SPR3P41901 512 aa5.31□□□□□ -1.56
TSR1YDL060W SUV3P32580 737 aa5.31□□□□□ -1.56
TSR1YDL060W ALD2P47771 506 aa5.31□□□□□ -1.56
TSR1YDL060W YBR197CP38306 217 aa5.3□□□□□ -1.56
TSR1YDL060W QDR2P40474 542 aa5.3□□□□□ -1.56
TSR1YDL060W CWC15Q03772 175 aaKnown RBP5.3□□□□□ -1.56
TSR1YDL060W PNP1Q05788 311 aa5.3□□□□□ -1.56
TSR1YDL060W ISC10P32645 267 aa5.3□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms