RNA–Protein interactions for RNA: YBL017C

PEP1, Transcript of Type I transmembrane sorting receptor for multiple vacuolar hydrolases, yeastyeast

Gene PEP1, Length 4,740 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP1YBL017C HAT1Q12341 374 aa2.44□□□□□ -2.02
PEP1YBL017C GLC3P32775 704 aa2.44□□□□□ -2.02
PEP1YBL017C SRF1Q12516 437 aa2.44□□□□□ -2.02
PEP1YBL017C YLR422WQ06409 1932 aa2.43□□□□□ -2.02
PEP1YBL017C PES4P39684 611 aa2.43□□□□□ -2.02
PEP1YBL017C ATG20Q07528 640 aa2.43□□□□□ -2.02
PEP1YBL017C PEX21P50091 288 aa2.43□□□□□ -2.02
PEP1YBL017C TUS1Q06412 1307 aa2.43□□□□□ -2.02
PEP1YBL017C COQ4O13525 335 aa2.43□□□□□ -2.02
PEP1YBL017C DAL5P15365 543 aa2.43□□□□□ -2.02
PEP1YBL017C PTK2P47116 818 aaKnown RBP2.43□□□□□ -2.02
PEP1YBL017C NSE3Q05541 303 aa2.43□□□□□ -2.02
PEP1YBL017C SNF3P10870 884 aa2.42□□□□□ -2.02
PEP1YBL017C LEO1P38439 464 aa2.42□□□□□ -2.02
PEP1YBL017C NUG1P40010 520 aaKnown RBP2.42□□□□□ -2.02
PEP1YBL017C SAP155P43612 1002 aa2.42□□□□□ -2.02
PEP1YBL017C HVG1P0CE11 249 aa2.42□□□□□ -2.02
PEP1YBL017C BOI2P39969 1040 aa2.42□□□□□ -2.02
PEP1YBL017C GYP7P48365 746 aa2.42□□□□□ -2.02
PEP1YBL017C CYB2P00175 591 aa2.42□□□□□ -2.02
PEP1YBL017C ATG13Q06628 738 aa2.41□□□□□ -2.02
PEP1YBL017C LCB1P25045 558 aaKnown RBP2.41□□□□□ -2.02
PEP1YBL017C PDR18P53756 1333 aa2.41□□□□□ -2.02
PEP1YBL017C TRP5P00931 707 aaKnown RBP2.41□□□□□ -2.02
PEP1YBL017C KAR2P16474 682 aaKnown RBP2.41□□□□□ -2.02
PEP1YBL017C RTG2P32608 588 aaKnown RBP2.41□□□□□ -2.02
PEP1YBL017C SRT1Q03175 343 aa2.41□□□□□ -2.02
PEP1YBL017C SPL2P38839 148 aa2.4□□□□□ -2.02
PEP1YBL017C BUD27P43573 796 aaKnown RBP RIP-Chip data2.4□□□□□ -2.02not detected
PEP1YBL017C EAF6P47128 113 aa2.4□□□□□ -2.02
PEP1YBL017C KAR5Q04746 504 aa2.4□□□□□ -2.02
PEP1YBL017C CDC45Q08032 650 aa2.4□□□□□ -2.02
PEP1YBL017C ICP55P40051 511 aa2.4□□□□□ -2.03
PEP1YBL017C RTR1P40084 226 aaPredicted RBP2.4□□□□□ -2.03
PEP1YBL017C VPS27P40343 622 aaKnown RBP2.4□□□□□ -2.03
PEP1YBL017C YBP2P53169 641 aa2.4□□□□□ -2.03
PEP1YBL017C SKG3Q06315 1026 aa2.4□□□□□ -2.03
PEP1YBL017C RTT109Q07794 436 aa2.4□□□□□ -2.03
PEP1YBL017C MNN4P36044 1178 aa2.4□□□□□ -2.03
PEP1YBL017C YER156CP40093 338 aaKnown RBP2.4□□□□□ -2.03
PEP1YBL017C MSH4P40965 878 aaPredicted RBP2.4□□□□□ -2.03
PEP1YBL017C PRY3P47033 881 aa2.4□□□□□ -2.03
PEP1YBL017C MTC3P53077 123 aa2.4□□□□□ -2.03
PEP1YBL017C LEU3P08638 886 aa2.39□□□□□ -2.03
PEP1YBL017C SUI2P20459 304 aaKnown RBP2.39□□□□□ -2.03
PEP1YBL017C RIX7Q07844 837 aaKnown RBP2.39□□□□□ -2.03
PEP1YBL017C LPD1P09624 499 aaKnown RBP2.39□□□□□ -2.03
PEP1YBL017C SMY1P32364 656 aaKnown RBP2.39□□□□□ -2.03
PEP1YBL017C PRS1P32895 427 aaKnown RBP2.39□□□□□ -2.03
PEP1YBL017C DPL1Q05567 589 aa2.39□□□□□ -2.03
PEP1YBL017C CSR2Q12734 1121 aa2.39□□□□□ -2.03
PEP1YBL017C KRE2P27809 442 aa2.39□□□□□ -2.03
PEP1YBL017C YGR117CP53270 476 aa2.39□□□□□ -2.03
PEP1YBL017C UBP12P39538 1254 aa2.39□□□□□ -2.03
PEP1YBL017C GAS4Q08271 471 aa2.39□□□□□ -2.03
PEP1YBL017C SSA4P22202 642 aaKnown RBP2.38□□□□□ -2.03
PEP1YBL017C SAF1P38352 637 aa2.38□□□□□ -2.03
PEP1YBL017C YIL092WP40497 633 aa2.38□□□□□ -2.03
PEP1YBL017C ZDS1P50111 915 aaKnown RBP2.38□□□□□ -2.03
PEP1YBL017C WRS1Q12109 432 aaKnown RBP2.38□□□□□ -2.03
PEP1YBL017C PPM2Q08282 695 aa2.38□□□□□ -2.03
PEP1YBL017C HSP104P31539 908 aaKnown RBP2.38□□□□□ -2.03
PEP1YBL017C ENP1P38333 483 aaKnown RBP2.38□□□□□ -2.03
PEP1YBL017C TIF4631P39935 952 aaKnown RBP2.38□□□□□ -2.03
PEP1YBL017C YIL089WP40500 205 aa2.38□□□□□ -2.03
PEP1YBL017C EPS1P40557 701 aa2.38□□□□□ -2.03
PEP1YBL017C TEA1P47988 759 aa2.38□□□□□ -2.03
PEP1YBL017C PIF1P07271 859 aa2.37□□□□□ -2.03
PEP1YBL017C SDH2P21801 266 aa2.37□□□□□ -2.03
PEP1YBL017C SPB4P25808 606 aaPredicted RBP2.37□□□□□ -2.03
PEP1YBL017C SSF1P38789 453 aaPredicted RBP2.37□□□□□ -2.03
PEP1YBL017C MSN5P52918 1224 aa2.37□□□□□ -2.03
PEP1YBL017C ITC1P53125 1264 aa2.37□□□□□ -2.03
PEP1YBL017C PKH3Q03306 898 aaPredicted RBP2.37□□□□□ -2.03
PEP1YBL017C CST9Q06032 482 aa2.37□□□□□ -2.03
PEP1YBL017C BDF2Q07442 638 aa2.37□□□□□ -2.03
PEP1YBL017C GUD1Q07729 489 aa2.37□□□□□ -2.03
PEP1YBL017C ARG82P07250 355 aa2.37□□□□□ -2.03
PEP1YBL017C RET1P22276 1149 aaKnown RBP2.37□□□□□ -2.03
PEP1YBL017C FAP1P53971 965 aa2.37□□□□□ -2.03
PEP1YBL017C TIM50Q02776 476 aa2.37□□□□□ -2.03
PEP1YBL017C FCP1Q03254 732 aa2.37□□□□□ -2.03
PEP1YBL017C ISW2Q08773 1120 aa2.37□□□□□ -2.03
PEP1YBL017C OSH3P38713 996 aaKnown RBP2.37□□□□□ -2.03
PEP1YBL017C HAL5P38970 855 aaKnown RBP2.37□□□□□ -2.03
PEP1YBL017C ATG32P40458 529 aa2.37□□□□□ -2.03
PEP1YBL017C YIR014WP40570 242 aa2.37□□□□□ -2.03
PEP1YBL017C GYP5Q12344 894 aa2.37□□□□□ -2.03
PEP1YBL017C EMP47P43555 445 aa2.36□□□□□ -2.03
PEP1YBL017C MRP7P12687 371 aa2.36□□□□□ -2.03
PEP1YBL017C NSR1P27476 414 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
PEP1YBL017C BIO2P32451 375 aa2.36□□□□□ -2.03
PEP1YBL017C TIM23P32897 222 aa2.36□□□□□ -2.03
PEP1YBL017C SET4P42948 560 aa2.36□□□□□ -2.03
PEP1YBL017C ALE1Q08548 619 aa2.36□□□□□ -2.03
PEP1YBL017C NOP2P40991 618 aaKnown RBP2.36□□□□□ -2.03
PEP1YBL017C RRT6P53117 311 aaPredicted RBP2.36□□□□□ -2.03
PEP1YBL017C ACK1Q07622 623 aaPredicted RBP2.36□□□□□ -2.03
PEP1YBL017C DPH6Q12429 685 aa2.36□□□□□ -2.03
PEP1YBL017C OPI1P21957 404 aa2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms