RNA–Protein interactions for RNA: ENST00000628181.1

CHD2-214, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-214ENST00000628181 NBPF26B4DH59 902 aa8.93□□□□□ -0.98
CHD2-214ENST00000628181 URB2Q14146 1524 aaKnown RBP8.93□□□□□ -0.98
CHD2-214ENST00000628181 ARAP1Q96P48 1450 aa8.92□□□□□ -0.98
CHD2-214ENST00000628181 TJAP1Q5JTD0 557 aa8.92□□□□□ -0.98
CHD2-214ENST00000628181 NUDT18Q6ZVK8 323 aa8.92□□□□□ -0.98
CHD2-214ENST00000628181 NPDC1Q9NQX5 325 aaPredicted RBP8.92□□□□□ -0.98
CHD2-214ENST00000628181 RBM27Q9P2N5 1060 aaKnown RBP8.92□□□□□ -0.98
CHD2-214ENST00000628181 CFTRP13569 1480 aa8.91□□□□□ -0.98
CHD2-214ENST00000628181 TTC13Q8NBP0 860 aa8.91□□□□□ -0.98
CHD2-214ENST00000628181 ZNF608Q9ULD9 1512 aaPredicted RBP8.88□□□□□ -0.99
CHD2-214ENST00000628181 IFT140Q96RY7 1462 aa8.88□□□□□ -0.99
CHD2-214ENST00000628181 MTRQ99707 1265 aa8.87□□□□□ -0.99
CHD2-214ENST00000628181 RSF1Q96T23 1441 aaPredicted RBP8.87□□□□□ -0.99
CHD2-214ENST00000628181 PADI6Q6TGC4 694 aa8.86□□□□□ -0.99
CHD2-214ENST00000628181 IL21Q9HBE4 155 aa8.86□□□□□ -0.99
CHD2-214ENST00000628181 TSHZ2Q9NRE2 1034 aa8.86□□□□□ -0.99
CHD2-214ENST00000628181 APLP1P51693 650 aa8.85□□□□□ -0.99
CHD2-214ENST00000628181 HDGFP51858 240 aaKnown RBP8.85□□□□□ -0.99
CHD2-214ENST00000628181 MLLT3P42568 568 aaPredicted RBP8.84□□□□□ -0.99
CHD2-214ENST00000628181 ZNF516Q92618 1163 aa8.84□□□□□ -0.99
CHD2-214ENST00000628181 ARHGEF1Q92888 912 aaKnown RBP8.84□□□□□ -0.99
CHD2-214ENST00000628181 WIZO95785 1651 aa8.84□□□□□ -0.99
CHD2-214ENST00000628181 RNF40O75150 1001 aa8.83□□□□□ -1
CHD2-214ENST00000628181 SWT1Q5T5J6 900 aaKnown RBP8.83□□□□□ -1
CHD2-214ENST00000628181 EYA1Q99502 592 aa8.83□□□□□ -1
CHD2-214ENST00000628181 CHD1O14646 1710 aa8.83□□□□□ -1
CHD2-214ENST00000628181 EIF4G3O43432 1585 aaKnown RBP8.82□□□□□ -1
CHD2-214ENST00000628181 PPP1R18Q6NYC8 613 aa8.81□□□□□ -1
CHD2-214ENST00000628181 Q6ZNB5 142 aa8.81□□□□□ -1
CHD2-214ENST00000628181 KCNV2Q8TDN2 545 aa8.81□□□□□ -1
CHD2-214ENST00000628181 SLF2Q8IX21 1173 aa8.8□□□□□ -1
CHD2-214ENST00000628181 NKX2-3Q8TAU0 364 aa8.79□□□□□ -1
CHD2-214ENST00000628181 PRKD2Q9BZL6 878 aa8.79□□□□□ -1
CHD2-214ENST00000628181 PRDM2Q13029 1718 aa8.78□□□□□ -1
CHD2-214ENST00000628181 NECTIN2Q92692 538 aa8.78□□□□□ -1
CHD2-214ENST00000628181 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.78□□□□□ -1
CHD2-214ENST00000628181 TOPBP1Q92547 1522 aa8.77□□□□□ -1.01
CHD2-214ENST00000628181 PTGDRQ13258 359 aa8.77□□□□□ -1.01
CHD2-214ENST00000628181 LAPTM4AQ15012 233 aa8.77□□□□□ -1.01
CHD2-214ENST00000628181 GFRA3O60609 400 aa8.76□□□□□ -1.01
CHD2-214ENST00000628181 COPS2P61201 443 aa8.76□□□□□ -1.01
CHD2-214ENST00000628181 LCE2BO14633 110 aa8.75□□□□□ -1.01
CHD2-214ENST00000628181 V9GY48 417 aaPredicted RBP8.75□□□□□ -1.01
CHD2-214ENST00000628181 ABCC8Q09428 1581 aa8.74□□□□□ -1.01
CHD2-214ENST00000628181 AQRO60306 1485 aaKnown RBP eCLIP8.74□□□□□ -1.012e-6■■□□□ 13.2
CHD2-214ENST00000628181 CLASP1Q7Z460 1538 aa8.74□□□□□ -1.01
CHD2-214ENST00000628181 TARBP1Q13395 1621 aaKnown RBP8.72□□□□□ -1.01
CHD2-214ENST00000628181 TOP2AP11388 1531 aaKnown RBP8.72□□□□□ -1.01
CHD2-214ENST00000628181 ZPR1O75312 459 aa8.72□□□□□ -1.01
CHD2-214ENST00000628181 DNAJB2P25686 324 aa8.72□□□□□ -1.01
CHD2-214ENST00000628181 SLC4A3P48751 1232 aa8.72□□□□□ -1.01
CHD2-214ENST00000628181 ADGRG1Q9Y653 693 aa8.72□□□□□ -1.01
CHD2-214ENST00000628181 DNMBPQ6XZF7 1577 aa8.71□□□□□ -1.02
CHD2-214ENST00000628181 RBM46Q8TBY0 533 aaKnown RBP8.71□□□□□ -1.02
CHD2-214ENST00000628181 NUTM2FA1L443 756 aa8.7□□□□□ -1.02
CHD2-214ENST00000628181 FAM161AQ3B820 660 aa8.7□□□□□ -1.02
CHD2-214ENST00000628181 TRAF7Q6Q0C0 670 aa8.7□□□□□ -1.02
CHD2-214ENST00000628181 PRR14Q9BWN1 585 aa8.7□□□□□ -1.02
CHD2-214ENST00000628181 TMEM134Q9H6X4 195 aa8.7□□□□□ -1.02
CHD2-214ENST00000628181 PCDHB3Q9Y5E6 796 aa8.7□□□□□ -1.02
CHD2-214ENST00000628181 SYNJ1O43426 1573 aa8.69□□□□□ -1.02
CHD2-214ENST00000628181 NRG2O14511 850 aaPredicted RBP8.69□□□□□ -1.02
CHD2-214ENST00000628181 GGCXP38435 758 aa8.69□□□□□ -1.02
CHD2-214ENST00000628181 TMUB1Q9BVT8 246 aa8.69□□□□□ -1.02
CHD2-214ENST00000628181 RCCD1A6NED2 376 aa8.68□□□□□ -1.02
CHD2-214ENST00000628181 BLOC1S3Q6QNY0 202 aa8.68□□□□□ -1.02
CHD2-214ENST00000628181 SEMA3EO15041 775 aa8.67□□□□□ -1.02
CHD2-214ENST00000628181 GAPVD1Q14C86 1478 aa8.67□□□□□ -1.02
CHD2-214ENST00000628181 FCHSD2O94868 740 aa8.66□□□□□ -1.02
CHD2-214ENST00000628181 P3H3Q8IVL6 736 aa8.66□□□□□ -1.02
CHD2-214ENST00000628181 POLA1P09884 1462 aaPredicted RBP8.65□□□□□ -1.02
CHD2-214ENST00000628181 SNAPC4Q5SXM2 1469 aa8.65□□□□□ -1.02
CHD2-214ENST00000628181 ACTN4O43707 911 aaKnown RBP8.65□□□□□ -1.02
CHD2-214ENST00000628181 WDR97A6NE52 1622 aa8.65□□□□□ -1.03
CHD2-214ENST00000628181 RNF223E7ERA6 249 aa8.64□□□□□ -1.03
CHD2-214ENST00000628181 SLC10A3P09131 477 aa8.64□□□□□ -1.03
CHD2-214ENST00000628181 CHMP7Q8WUX9 453 aaPredicted RBP8.64□□□□□ -1.03
CHD2-214ENST00000628181 EMID1Q96A84 441 aaPredicted RBP8.64□□□□□ -1.03
CHD2-214ENST00000628181 PDZRN3Q9UPQ7 1066 aa8.64□□□□□ -1.03
CHD2-214ENST00000628181 MAGI1Q96QZ7 1491 aaPredicted RBP8.64□□□□□ -1.03
CHD2-214ENST00000628181 TLL1O43897 1013 aa8.63□□□□□ -1.03
CHD2-214ENST00000628181 KMT5BQ4FZB7 885 aa8.63□□□□□ -1.03
CHD2-214ENST00000628181 TDRD9Q8NDG6 1382 aaKnown RBP8.62□□□□□ -1.03
CHD2-214ENST00000628181 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.62□□□□□ -1.03
CHD2-214ENST00000628181 CFHP08603 1231 aa8.62□□□□□ -1.03
CHD2-214ENST00000628181 PXYLP1Q8TE99 480 aa8.62□□□□□ -1.03
CHD2-214ENST00000628181 CCDC88BA6NC98 1476 aa8.61□□□□□ -1.03
CHD2-214ENST00000628181 SYNJ2O15056 1496 aa8.61□□□□□ -1.03
CHD2-214ENST00000628181 RAD54L2Q9Y4B4 1467 aa8.61□□□□□ -1.03
CHD2-214ENST00000628181 OATP04181 439 aa8.6□□□□□ -1.03
CHD2-214ENST00000628181 SLC19A1P41440 591 aa8.6□□□□□ -1.03
CHD2-214ENST00000628181 SOGA1O94964 1423 aa8.6□□□□□ -1.03
CHD2-214ENST00000628181 TESPA1A2RU30 521 aaPredicted RBP8.59□□□□□ -1.03
CHD2-214ENST00000628181 PPEF1O14829 653 aaPredicted RBP8.59□□□□□ -1.03
CHD2-214ENST00000628181 HIC1Q14526 733 aa8.59□□□□□ -1.03
CHD2-214ENST00000628181 TRIM67Q6ZTA4 783 aa8.59□□□□□ -1.03
CHD2-214ENST00000628181 GRIN2BQ13224 1484 aa8.58□□□□□ -1.04
CHD2-214ENST00000628181 S1PR4O95977 384 aa8.58□□□□□ -1.04
CHD2-214ENST00000628181 RBM26Q5T8P6 1007 aaKnown RBP8.58□□□□□ -1.04
CHD2-214ENST00000628181 ANKLE1Q8NAG6 615 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms