RNA–Protein interactions for RNA: ENST00000556782.5

PRPF39-211, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 645 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-211ENST00000556782 IL21Q9HBE4 155 aa9.63□□□□□ -0.87
PRPF39-211ENST00000556782 FGD5Q6ZNL6 1462 aa9.63□□□□□ -0.87
PRPF39-211ENST00000556782 RAD54L2Q9Y4B4 1467 aa9.63□□□□□ -0.87
PRPF39-211ENST00000556782 AQRO60306 1485 aaKnown RBP eCLIP9.62□□□□□ -0.87
PRPF39-211ENST00000556782 PPP1R18Q6NYC8 613 aa9.62□□□□□ -0.87
PRPF39-211ENST00000556782 MTRQ99707 1265 aa9.62□□□□□ -0.87
PRPF39-211ENST00000556782 SOGA1O94964 1423 aa9.62□□□□□ -0.87
PRPF39-211ENST00000556782 WDR97A6NE52 1622 aa9.6□□□□□ -0.87
PRPF39-211ENST00000556782 SMAPO00193 183 aa9.6□□□□□ -0.87
PRPF39-211ENST00000556782 CDCA7LQ96GN5 454 aa9.6□□□□□ -0.87
PRPF39-211ENST00000556782 PRSS12P56730 875 aa9.59□□□□□ -0.87
PRPF39-211ENST00000556782 CERKQ8TCT0 537 aa9.59□□□□□ -0.87
PRPF39-211ENST00000556782 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.59□□□□□ -0.87
PRPF39-211ENST00000556782 HDGFP51858 240 aaKnown RBP9.58□□□□□ -0.88
PRPF39-211ENST00000556782 TDRD9Q8NDG6 1382 aaKnown RBP9.58□□□□□ -0.88
PRPF39-211ENST00000556782 ZNF787Q6DD87 383 aa9.57□□□□□ -0.88
PRPF39-211ENST00000556782 CHD1O14646 1710 aa9.56□□□□□ -0.88
PRPF39-211ENST00000556782 NBPF26B4DH59 902 aa9.56□□□□□ -0.88
PRPF39-211ENST00000556782 PDIA6Q15084 440 aa9.56□□□□□ -0.88
PRPF39-211ENST00000556782 ZNF516Q92618 1163 aa9.56□□□□□ -0.88
PRPF39-211ENST00000556782 TATDN2Q93075 761 aa9.56□□□□□ -0.88
PRPF39-211ENST00000556782 PDZRN3Q9UPQ7 1066 aa9.56□□□□□ -0.88
PRPF39-211ENST00000556782 SNAPC4Q5SXM2 1469 aa9.55□□□□□ -0.88
PRPF39-211ENST00000556782 SPDYE16A6NNV3 312 aaPredicted RBP9.55□□□□□ -0.88
PRPF39-211ENST00000556782 PNMA3Q9UL41 463 aa9.55□□□□□ -0.88
PRPF39-211ENST00000556782 RIMBP3CA6NJZ7 1639 aa9.54□□□□□ -0.88
PRPF39-211ENST00000556782 RIMBP3BA6NNM3 1639 aa9.54□□□□□ -0.88
PRPF39-211ENST00000556782 RIMBP3Q9UFD9 1639 aa9.54□□□□□ -0.88
PRPF39-211ENST00000556782 RNF40O75150 1001 aa9.54□□□□□ -0.88
PRPF39-211ENST00000556782 FAM198AQ9UFP1 575 aa9.54□□□□□ -0.88
PRPF39-211ENST00000556782 GRIN2BQ13224 1484 aa9.53□□□□□ -0.88
PRPF39-211ENST00000556782 MAGI1Q96QZ7 1491 aaPredicted RBP9.53□□□□□ -0.88
PRPF39-211ENST00000556782 ABCA10Q8WWZ4 1543 aa9.53□□□□□ -0.88
PRPF39-211ENST00000556782 GGCXP38435 758 aa9.53□□□□□ -0.88
PRPF39-211ENST00000556782 TOP2BQ02880 1626 aa9.53□□□□□ -0.88
PRPF39-211ENST00000556782 BIVM-ERCC5R4GMW8 1640 aa9.53□□□□□ -0.88
PRPF39-211ENST00000556782 ARHGEF11O15085 1522 aa9.52□□□□□ -0.88
PRPF39-211ENST00000556782 SYNJ1O43426 1573 aa9.52□□□□□ -0.89
PRPF39-211ENST00000556782 WRNQ14191 1432 aaPredicted RBP eCLIP9.52□□□□□ -0.89
PRPF39-211ENST00000556782 SPRYD3Q8NCJ5 442 aa9.52□□□□□ -0.89
PRPF39-211ENST00000556782 ABCA5Q8WWZ7 1642 aa9.52□□□□□ -0.89
PRPF39-211ENST00000556782 GAPVD1Q14C86 1478 aa9.52□□□□□ -0.89
PRPF39-211ENST00000556782 APLP1P51693 650 aa9.51□□□□□ -0.89
PRPF39-211ENST00000556782 NECTIN2Q92692 538 aa9.51□□□□□ -0.89
PRPF39-211ENST00000556782 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.51□□□□□ -0.89
PRPF39-211ENST00000556782 PBRM1Q86U86 1689 aa9.51□□□□□ -0.89
PRPF39-211ENST00000556782 C3orf80F5H4A9 247 aa9.5□□□□□ -0.89
PRPF39-211ENST00000556782 NKX2-3Q8TAU0 364 aa9.5□□□□□ -0.89
PRPF39-211ENST00000556782 SYNJ2O15056 1496 aa9.49□□□□□ -0.89
PRPF39-211ENST00000556782 NUDT18Q6ZVK8 323 aa9.49□□□□□ -0.89
PRPF39-211ENST00000556782 CLASP1Q7Z460 1538 aa9.49□□□□□ -0.89
PRPF39-211ENST00000556782 GRXCR2A6NFK2 248 aa9.48□□□□□ -0.89
PRPF39-211ENST00000556782 TMUB1Q9BVT8 246 aa9.48□□□□□ -0.89
PRPF39-211ENST00000556782 CHMP7Q8WUX9 453 aaPredicted RBP9.47□□□□□ -0.89
PRPF39-211ENST00000556782 PRIM1P49642 420 aaKnown RBP9.46□□□□□ -0.9
PRPF39-211ENST00000556782 COPS2P61201 443 aa9.46□□□□□ -0.9
PRPF39-211ENST00000556782 ZNF775Q96BV0 537 aaPredicted RBP9.46□□□□□ -0.9
PRPF39-211ENST00000556782 RBM27Q9P2N5 1060 aaKnown RBP9.46□□□□□ -0.9
PRPF39-211ENST00000556782 SLF2Q8IX21 1173 aa9.45□□□□□ -0.9
PRPF39-211ENST00000556782 ARAP1Q96P48 1450 aa9.45□□□□□ -0.9
PRPF39-211ENST00000556782 SLC4A3P48751 1232 aa9.44□□□□□ -0.9
PRPF39-211ENST00000556782 ADAMTS12P58397 1594 aa9.44□□□□□ -0.9
PRPF39-211ENST00000556782 ERICH3Q5RHP9 1530 aa9.42□□□□□ -0.9
PRPF39-211ENST00000556782 ZPR1O75312 459 aa9.42□□□□□ -0.9
PRPF39-211ENST00000556782 E2F4Q16254 413 aa9.42□□□□□ -0.9
PRPF39-211ENST00000556782 SWT1Q5T5J6 900 aaKnown RBP9.42□□□□□ -0.9
PRPF39-211ENST00000556782 CDHR5Q9HBB8 845 aa9.42□□□□□ -0.9
PRPF39-211ENST00000556782 GRIN2AQ12879 1464 aa9.41□□□□□ -0.9
PRPF39-211ENST00000556782 OSBPP22059 807 aa9.41□□□□□ -0.9
PRPF39-211ENST00000556782 PAXIP1Q6ZW49 1069 aaPredicted RBP9.41□□□□□ -0.9
PRPF39-211ENST00000556782 ARIH1Q9Y4X5 557 aaPredicted RBP9.41□□□□□ -0.9
PRPF39-211ENST00000556782 FHAD1B1AJZ9 1412 aa9.4□□□□□ -0.9
PRPF39-211ENST00000556782 CYB5RLQ6IPT4 315 aa9.4□□□□□ -0.9
PRPF39-211ENST00000556782 PRR14Q9BWN1 585 aa9.4□□□□□ -0.9
PRPF39-211ENST00000556782 SLC19A1P41440 591 aa9.39□□□□□ -0.91
PRPF39-211ENST00000556782 NUP160Q12769 1436 aa9.39□□□□□ -0.91
PRPF39-211ENST00000556782 CEP170Q5SW79 1584 aa9.38□□□□□ -0.91
PRPF39-211ENST00000556782 PKDCCQ504Y2 493 aa9.38□□□□□ -0.91
PRPF39-211ENST00000556782 TRIM67Q6ZTA4 783 aa9.37□□□□□ -0.91
PRPF39-211ENST00000556782 TTC13Q8NBP0 860 aa9.37□□□□□ -0.91
PRPF39-211ENST00000556782 CFAP44Q96MT7 982 aa9.37□□□□□ -0.91
PRPF39-211ENST00000556782 PCDHB3Q9Y5E6 796 aa9.37□□□□□ -0.91
PRPF39-211ENST00000556782 RNF223E7ERA6 249 aa9.36□□□□□ -0.91
PRPF39-211ENST00000556782 DGAT1O75907 488 aa9.36□□□□□ -0.91
PRPF39-211ENST00000556782 PADI6Q6TGC4 694 aa9.36□□□□□ -0.91
PRPF39-211ENST00000556782 WDR70Q9NW82 654 aa9.36□□□□□ -0.91
PRPF39-211ENST00000556782 MYT1Q01538 1121 aa9.34□□□□□ -0.91
PRPF39-211ENST00000556782 SHROOM2Q13796 1616 aa9.34□□□□□ -0.91
PRPF39-211ENST00000556782 SPRYD7Q5W111 196 aa9.33□□□□□ -0.92
PRPF39-211ENST00000556782 ZNF598Q86UK7 904 aaKnown RBP9.33□□□□□ -0.92
PRPF39-211ENST00000556782 EYA1Q99502 592 aa9.33□□□□□ -0.92
PRPF39-211ENST00000556782 NPDC1Q9NQX5 325 aaPredicted RBP9.33□□□□□ -0.92
PRPF39-211ENST00000556782 ERCC6L2Q5T890 1561 aa9.33□□□□□ -0.92
PRPF39-211ENST00000556782 KIF27Q86VH2 1401 aa9.32□□□□□ -0.92
PRPF39-211ENST00000556782 PRR20EP86478 221 aa9.32□□□□□ -0.92
PRPF39-211ENST00000556782 PRR20CP86479 221 aa9.32□□□□□ -0.92
PRPF39-211ENST00000556782 PRR20DP86480 221 aa9.32□□□□□ -0.92
PRPF39-211ENST00000556782 PRR20BP86481 221 aa9.32□□□□□ -0.92
PRPF39-211ENST00000556782 PRR20AP86496 221 aa9.32□□□□□ -0.92
PRPF39-211ENST00000556782 BLOC1S3Q6QNY0 202 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms