RNA–Protein interactions for RNA: ENST00000552295.5

BEST3-211, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 720 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-211ENST00000552295 LRCH3Q96II8 777 aa13.31□□□□□ -0.28
BEST3-211ENST00000552295 KIF27Q86VH2 1401 aa13.3□□□□□ -0.28
BEST3-211ENST00000552295 TSKSQ9UJT2 592 aa13.3□□□□□ -0.28
BEST3-211ENST00000552295 TSR3Q9UJK0 312 aaKnown RBP13.29□□□□□ -0.28
BEST3-211ENST00000552295 ARIH1Q9Y4X5 557 aaPredicted RBP13.29□□□□□ -0.28
BEST3-211ENST00000552295 RTN4Q9NQC3 1192 aaKnown RBP13.28□□□□□ -0.28
BEST3-211ENST00000552295 HPS5Q9UPZ3 1129 aa13.28□□□□□ -0.28
BEST3-211ENST00000552295 ZNF608Q9ULD9 1512 aaPredicted RBP13.28□□□□□ -0.28
BEST3-211ENST00000552295 GRXCR2A6NFK2 248 aa13.27□□□□□ -0.29
BEST3-211ENST00000552295 FAM9AQ8IZU1 332 aaPredicted RBP13.27□□□□□ -0.29
BEST3-211ENST00000552295 TDRD9Q8NDG6 1382 aaKnown RBP13.27□□□□□ -0.29
BEST3-211ENST00000552295 EIF4G3O43432 1585 aaKnown RBP13.27□□□□□ -0.29
BEST3-211ENST00000552295 PBRM1Q86U86 1689 aa13.26□□□□□ -0.29
BEST3-211ENST00000552295 CERKQ8TCT0 537 aa13.26□□□□□ -0.29
BEST3-211ENST00000552295 GAPVD1Q14C86 1478 aa13.25□□□□□ -0.29
BEST3-211ENST00000552295 KCNC4Q03721 635 aa13.25□□□□□ -0.29
BEST3-211ENST00000552295 CDCA7LQ96GN5 454 aa13.25□□□□□ -0.29
BEST3-211ENST00000552295 IRX2Q9BZI1 471 aaPredicted RBP13.25□□□□□ -0.29
BEST3-211ENST00000552295 PRSS12P56730 875 aa13.24□□□□□ -0.29
BEST3-211ENST00000552295 AQRO60306 1485 aaKnown RBP eCLIP13.23□□□□□ -0.29
BEST3-211ENST00000552295 PRIM1P49642 420 aaKnown RBP13.22□□□□□ -0.29
BEST3-211ENST00000552295 ERICH3Q5RHP9 1530 aa13.22□□□□□ -0.29
BEST3-211ENST00000552295 IGF1RP08069 1367 aa13.2□□□□□ -0.3
BEST3-211ENST00000552295 CUL7Q14999 1698 aa13.2□□□□□ -0.3
BEST3-211ENST00000552295 KIF21BO75037 1637 aa13.2□□□□□ -0.3
BEST3-211ENST00000552295 GRIN2BQ13224 1484 aa13.19□□□□□ -0.3
BEST3-211ENST00000552295 NBPF26B4DH59 902 aa13.19□□□□□ -0.3
BEST3-211ENST00000552295 SMAPO00193 183 aa13.19□□□□□ -0.3
BEST3-211ENST00000552295 PPP4CP60510 307 aa13.19□□□□□ -0.3
BEST3-211ENST00000552295 FAM198AQ9UFP1 575 aa13.19□□□□□ -0.3
BEST3-211ENST00000552295 PRXQ9BXM0 1461 aa13.17□□□□□ -0.3
BEST3-211ENST00000552295 OSBPP22059 807 aa13.17□□□□□ -0.3
BEST3-211ENST00000552295 SAMD7Q7Z3H4 446 aa13.17□□□□□ -0.3
BEST3-211ENST00000552295 PNMA3Q9UL41 463 aa13.17□□□□□ -0.3
BEST3-211ENST00000552295 TATDN2Q93075 761 aa13.16□□□□□ -0.3
BEST3-211ENST00000552295 ADAMTS12P58397 1594 aa13.15□□□□□ -0.3
BEST3-211ENST00000552295 CDHR5Q9HBB8 845 aa13.15□□□□□ -0.3
BEST3-211ENST00000552295 SNAPC4Q5SXM2 1469 aa13.14□□□□□ -0.31
BEST3-211ENST00000552295 MAGI1Q96QZ7 1491 aaPredicted RBP13.13□□□□□ -0.31
BEST3-211ENST00000552295 CARMIL1Q5VZK9 1371 aa13.13□□□□□ -0.31
BEST3-211ENST00000552295 RBM27Q9P2N5 1060 aaKnown RBP13.13□□□□□ -0.31
BEST3-211ENST00000552295 RAPGEF2Q9Y4G8 1499 aa13.12□□□□□ -0.31
BEST3-211ENST00000552295 GOLGA3Q08378 1498 aa13.11□□□□□ -0.31
BEST3-211ENST00000552295 C3orf80F5H4A9 247 aa13.11□□□□□ -0.31
BEST3-211ENST00000552295 FHAD1B1AJZ9 1412 aa13.11□□□□□ -0.31
BEST3-211ENST00000552295 HDGFP51858 240 aaKnown RBP13.1□□□□□ -0.31
BEST3-211ENST00000552295 NUDT18Q6ZVK8 323 aa13.1□□□□□ -0.31
BEST3-211ENST00000552295 LOC105371045A0A1W2PR82 267 aa13.09□□□□□ -0.31
BEST3-211ENST00000552295 SYNJ2O15056 1496 aa13.07□□□□□ -0.32
BEST3-211ENST00000552295 RNF40O75150 1001 aa13.06□□□□□ -0.32
BEST3-211ENST00000552295 TJAP1Q5JTD0 557 aa13.06□□□□□ -0.32
BEST3-211ENST00000552295 CHD1O14646 1710 aa13.05□□□□□ -0.32
BEST3-211ENST00000552295 PADI6Q6TGC4 694 aa13.04□□□□□ -0.32
BEST3-211ENST00000552295 IL21Q9HBE4 155 aa13.04□□□□□ -0.32
BEST3-211ENST00000552295 CTTNBP2Q8WZ74 1663 aa13.04□□□□□ -0.32
BEST3-211ENST00000552295 GRIN2AQ12879 1464 aa13.04□□□□□ -0.32
BEST3-211ENST00000552295 TTC13Q8NBP0 860 aa13.03□□□□□ -0.32
BEST3-211ENST00000552295 MTRQ99707 1265 aa13.03□□□□□ -0.32
BEST3-211ENST00000552295 NECTIN2Q92692 538 aa13.02□□□□□ -0.33
BEST3-211ENST00000552295 NPDC1Q9NQX5 325 aaPredicted RBP13.02□□□□□ -0.33
BEST3-211ENST00000552295 ARHGEF1Q92888 912 aaKnown RBP13.01□□□□□ -0.33
BEST3-211ENST00000552295 TNIKQ9UKE5 1360 aa13.01□□□□□ -0.33
BEST3-211ENST00000552295 UBTFP17480 764 aaKnown RBP13□□□□□ -0.33
BEST3-211ENST00000552295 TSHZ2Q9NRE2 1034 aa12.99□□□□□ -0.33
BEST3-211ENST00000552295 CEP170Q5SW79 1584 aa12.98□□□□□ -0.33
BEST3-211ENST00000552295 APLP1P51693 650 aa12.98□□□□□ -0.33
BEST3-211ENST00000552295 SWT1Q5T5J6 900 aaKnown RBP12.98□□□□□ -0.33
BEST3-211ENST00000552295 Q6ZNB5 142 aa12.98□□□□□ -0.33
BEST3-211ENST00000552295 SLF2Q8IX21 1173 aa12.98□□□□□ -0.33
BEST3-211ENST00000552295 CHMP7Q8WUX9 453 aaPredicted RBP12.98□□□□□ -0.33
BEST3-211ENST00000552295 SLC4A3P48751 1232 aa12.97□□□□□ -0.33
BEST3-211ENST00000552295 NUP160Q12769 1436 aa12.96□□□□□ -0.33
BEST3-211ENST00000552295 MLLT3P42568 568 aaPredicted RBP12.95□□□□□ -0.34
BEST3-211ENST00000552295 LAPTM4AQ15012 233 aa12.94□□□□□ -0.34
BEST3-211ENST00000552295 ZNF516Q92618 1163 aa12.94□□□□□ -0.34
BEST3-211ENST00000552295 IQGAP2Q13576 1575 aa12.94□□□□□ -0.34
BEST3-211ENST00000552295 PPP1R18Q6NYC8 613 aa12.93□□□□□ -0.34
BEST3-211ENST00000552295 KCNV2Q8TDN2 545 aa12.93□□□□□ -0.34
BEST3-211ENST00000552295 EYA1Q99502 592 aa12.93□□□□□ -0.34
BEST3-211ENST00000552295 CEP162Q5TB80 1403 aa12.93□□□□□ -0.34
BEST3-211ENST00000552295 KIAA0586Q9BVV6 1533 aa12.93□□□□□ -0.34
BEST3-211ENST00000552295 PRKD2Q9BZL6 878 aa12.92□□□□□ -0.34
BEST3-211ENST00000552295 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.9□□□□□ -0.34
BEST3-211ENST00000552295 CLIP1P30622 1438 aa12.88□□□□□ -0.35
BEST3-211ENST00000552295 CLASP1Q7Z460 1538 aa12.88□□□□□ -0.35
BEST3-211ENST00000552295 GFRA3O60609 400 aa12.88□□□□□ -0.35
BEST3-211ENST00000552295 COPS2P61201 443 aa12.88□□□□□ -0.35
BEST3-211ENST00000552295 PTGDRQ13258 359 aa12.87□□□□□ -0.35
BEST3-211ENST00000552295 PRR14Q9BWN1 585 aa12.87□□□□□ -0.35
BEST3-211ENST00000552295 V9GY48 417 aaPredicted RBP12.87□□□□□ -0.35
BEST3-211ENST00000552295 UGGT2Q9NYU1 1516 aa12.87□□□□□ -0.35
BEST3-211ENST00000552295 SAMD9Q5K651 1589 aa12.86□□□□□ -0.35
BEST3-211ENST00000552295 NKX2-3Q8TAU0 364 aa12.86□□□□□ -0.35
BEST3-211ENST00000552295 SHROOM2Q13796 1616 aa12.86□□□□□ -0.35
BEST3-211ENST00000552295 EFCAB5A4FU69 1503 aa12.86□□□□□ -0.35
BEST3-211ENST00000552295 ARHGAP35Q9NRY4 1499 aa12.85□□□□□ -0.35
BEST3-211ENST00000552295 GGCXP38435 758 aa12.85□□□□□ -0.35
BEST3-211ENST00000552295 DNAJB2P25686 324 aa12.84□□□□□ -0.35
BEST3-211ENST00000552295 RANGAP1P46060 587 aaPredicted RBP12.84□□□□□ -0.35
BEST3-211ENST00000552295 RBM46Q8TBY0 533 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms