RNA–Protein interactions for RNA: ENSMUST00000109544.8

Vcan-202, Transcript of Versican core protein, mousemouse

TSL 5 BASIC

Gene Vcan, Length 5,702 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-202ENSMUST00000109544 Cdkn1cP49919 348 aa12.99□□□□□ -0.33
Vcan-202ENSMUST00000109544 Vps53Q8CCB4 832 aa12.99□□□□□ -0.33
Vcan-202ENSMUST00000109544 GsdmaQ9EST1 446 aa12.99□□□□□ -0.33
Vcan-202ENSMUST00000109544 Tceal9Q9DD24 104 aa12.98□□□□□ -0.33
Vcan-202ENSMUST00000109544 Prkrip1Q9CWV6 186 aaKnown RBP12.98□□□□□ -0.33
Vcan-202ENSMUST00000109544 Rfx1P48377 963 aa12.97□□□□□ -0.33
Vcan-202ENSMUST00000109544 PdcQ9QW08 244 aa12.97□□□□□ -0.33
Vcan-202ENSMUST00000109544 Def6Q8C2K1 630 aa12.97□□□□□ -0.33
Vcan-202ENSMUST00000109544 Mcm2P97310 904 aa12.97□□□□□ -0.33
Vcan-202ENSMUST00000109544 HmmrQ00547 794 aaKnown RBP12.97□□□□□ -0.33
Vcan-202ENSMUST00000109544 Pank3Q8R2W9 370 aa12.96□□□□□ -0.33
Vcan-202ENSMUST00000109544 Erc2Q6PH08 957 aa12.96□□□□□ -0.33
Vcan-202ENSMUST00000109544 Eif2s2Q99L45 331 aaKnown RBP12.96□□□□□ -0.33
Vcan-202ENSMUST00000109544 BccipQ9CWI3 316 aa12.96□□□□□ -0.34
Vcan-202ENSMUST00000109544 Ccdc43Q9CR29 222 aaKnown RBP12.95□□□□□ -0.34
Vcan-202ENSMUST00000109544 Gps2Q921N8 327 aa12.94□□□□□ -0.34
Vcan-202ENSMUST00000109544 Trim29Q8R2Q0 587 aa12.94□□□□□ -0.34
Vcan-202ENSMUST00000109544 Hoxa7P02830 229 aa12.94□□□□□ -0.34
Vcan-202ENSMUST00000109544 1700010I14RikQ7TPG0 532 aa12.94□□□□□ -0.34
Vcan-202ENSMUST00000109544 Phf14Q9D4H9 881 aa12.94□□□□□ -0.34
Vcan-202ENSMUST00000109544 Fam184bQ0KK56 942 aa12.93□□□□□ -0.34
Vcan-202ENSMUST00000109544 Polr3gQ6NXY9 223 aa12.93□□□□□ -0.34
Vcan-202ENSMUST00000109544 Cfap99A0A140LIX9 648 aa12.93□□□□□ -0.34
Vcan-202ENSMUST00000109544 Rpap1Q80TE0 1409 aa12.93□□□□□ -0.34
Vcan-202ENSMUST00000109544 Nop14Q8R3N1 860 aaKnown RBP12.93□□□□□ -0.34
Vcan-202ENSMUST00000109544 Ints3Q7TPD0 1041 aaKnown RBP12.93□□□□□ -0.34
Vcan-202ENSMUST00000109544 Fez1Q8K0X8 392 aa12.93□□□□□ -0.34
Vcan-202ENSMUST00000109544 Ipo4Q8VI75 1082 aa12.93□□□□□ -0.34
Vcan-202ENSMUST00000109544 Psma5Q9Z2U1 241 aaKnown RBP12.93□□□□□ -0.34
Vcan-202ENSMUST00000109544 Txndc2Q6P902 515 aa12.92□□□□□ -0.34
Vcan-202ENSMUST00000109544 Arid4aF8VPQ2 1261 aaKnown RBP12.92□□□□□ -0.34
Vcan-202ENSMUST00000109544 Lrrcc1Q69ZB0 1026 aa12.92□□□□□ -0.34
Vcan-202ENSMUST00000109544 Pibf1E9Q6K3 756 aa12.92□□□□□ -0.34
Vcan-202ENSMUST00000109544 Usp47Q8BY87 1376 aa12.92□□□□□ -0.34
Vcan-202ENSMUST00000109544 Gtf2a1Q99PM3 378 aa12.91□□□□□ -0.34
Vcan-202ENSMUST00000109544 UvssaQ9D479 717 aa12.91□□□□□ -0.34
Vcan-202ENSMUST00000109544 Ap3b2Q9JME5 1082 aa12.91□□□□□ -0.34
Vcan-202ENSMUST00000109544 Mrvi1Q9WUX5 899 aaKnown RBP12.91□□□□□ -0.34
Vcan-202ENSMUST00000109544 Ccdc183A2AJB1 534 aa12.91□□□□□ -0.34
Vcan-202ENSMUST00000109544 Tmco3Q8BH01 678 aa12.91□□□□□ -0.34
Vcan-202ENSMUST00000109544 Fam193aQ8CGI1 1231 aaKnown RBP12.9□□□□□ -0.34
Vcan-202ENSMUST00000109544 Ccdc88bQ4QRL3 1481 aa12.9□□□□□ -0.34
Vcan-202ENSMUST00000109544 Phactr2B1AVP0 632 aa12.9□□□□□ -0.34
Vcan-202ENSMUST00000109544 AppP12023 770 aa12.9□□□□□ -0.34
Vcan-202ENSMUST00000109544 Carmil1Q6EDY6 1374 aa12.9□□□□□ -0.34
Vcan-202ENSMUST00000109544 Gnai1B2RSH2 354 aa12.89□□□□□ -0.35
Vcan-202ENSMUST00000109544 March6Q6ZQ89 909 aa12.89□□□□□ -0.35
Vcan-202ENSMUST00000109544 Gnai3Q9DC51 354 aa12.89□□□□□ -0.35
Vcan-202ENSMUST00000109544 Pip4k2aO70172 405 aa12.89□□□□□ -0.35
Vcan-202ENSMUST00000109544 Podxl2Q8CAE9 603 aa12.89□□□□□ -0.35
Vcan-202ENSMUST00000109544 AnlnQ8K298 1121 aaKnown RBP12.89□□□□□ -0.35
Vcan-202ENSMUST00000109544 Kif3bQ61771 747 aa12.89□□□□□ -0.35
Vcan-202ENSMUST00000109544 Smc2Q8CG48 1191 aaKnown RBP12.89□□□□□ -0.35
Vcan-202ENSMUST00000109544 Tubb6Q922F4 447 aa12.89□□□□□ -0.35
Vcan-202ENSMUST00000109544 Plekhh1Q80TI1 1356 aa12.88□□□□□ -0.35
Vcan-202ENSMUST00000109544 Fan1Q69ZT1 1020 aa12.88□□□□□ -0.35
Vcan-202ENSMUST00000109544 Znf771Q8BJ90 317 aa12.88□□□□□ -0.35
Vcan-202ENSMUST00000109544 Fam13bQ8K2H3 851 aa12.88□□□□□ -0.35
Vcan-202ENSMUST00000109544 Q9D2X8 372 aa12.88□□□□□ -0.35
Vcan-202ENSMUST00000109544 Triml2E9PW10 424 aa12.87□□□□□ -0.35
Vcan-202ENSMUST00000109544 Ppp1r18Q8BQ30 594 aa12.87□□□□□ -0.35
Vcan-202ENSMUST00000109544 Ggt6Q6PDE7 497 aa12.87□□□□□ -0.35
Vcan-202ENSMUST00000109544 Zscan10Q3URR7 782 aa12.87□□□□□ -0.35
Vcan-202ENSMUST00000109544 Utp14aQ640M1 767 aaKnown RBP12.87□□□□□ -0.35
Vcan-202ENSMUST00000109544 Inpp5dQ9ES52 1191 aa12.87□□□□□ -0.35
Vcan-202ENSMUST00000109544 Ankrd36D3Z4K0 1415 aa12.87□□□□□ -0.35
Vcan-202ENSMUST00000109544 Nat10Q8K224 1024 aaKnown RBP12.87□□□□□ -0.35
Vcan-202ENSMUST00000109544 Kdm5dQ62240 1548 aa12.86□□□□□ -0.35
Vcan-202ENSMUST00000109544 Trim55G3X8Y1 545 aa12.86□□□□□ -0.35
Vcan-202ENSMUST00000109544 Sox12Q04890 314 aa12.86□□□□□ -0.35
Vcan-202ENSMUST00000109544 Cep112Q5PR68 954 aa12.86□□□□□ -0.35
Vcan-202ENSMUST00000109544 Erlin2Q8BFZ9 340 aa12.86□□□□□ -0.35
Vcan-202ENSMUST00000109544 Ccdc171E9Q1U1 1324 aa12.86□□□□□ -0.35
Vcan-202ENSMUST00000109544 Q8BT18 775 aa12.85□□□□□ -0.35
Vcan-202ENSMUST00000109544 Hnrnpul1Q8VDM6 859 aaKnown RBP12.85□□□□□ -0.35
Vcan-202ENSMUST00000109544 Luc7lQ9CYI4 371 aaKnown RBP12.85□□□□□ -0.35
Vcan-202ENSMUST00000109544 Mad1l1Q9WTX8 717 aaKnown RBP12.85□□□□□ -0.35
Vcan-202ENSMUST00000109544 PogkQ80TC5 607 aa12.85□□□□□ -0.35
Vcan-202ENSMUST00000109544 Ppp2r3aB2RXC8 1150 aa12.85□□□□□ -0.35
Vcan-202ENSMUST00000109544 Zkscan1Q8BGS3 561 aaKnown RBP12.84□□□□□ -0.35
Vcan-202ENSMUST00000109544 AknaQ80VW7 1404 aa12.84□□□□□ -0.35
Vcan-202ENSMUST00000109544 CrcpO35427 148 aa12.84□□□□□ -0.35
Vcan-202ENSMUST00000109544 Kiaa0753Q6A000 959 aa12.84□□□□□ -0.35
Vcan-202ENSMUST00000109544 Ccdc30Q8BVF4 654 aa12.84□□□□□ -0.35
Vcan-202ENSMUST00000109544 Phldb2Q8K1N2 1249 aa12.84□□□□□ -0.35
Vcan-202ENSMUST00000109544 TxlnbQ8VBT1 685 aa12.84□□□□□ -0.35
Vcan-202ENSMUST00000109544 Zkscan2G3X952 960 aa12.84□□□□□ -0.35
Vcan-202ENSMUST00000109544 Ric3Q8BPM6 367 aa12.84□□□□□ -0.35
Vcan-202ENSMUST00000109544 Ccnb3Q810T2 1396 aa12.83□□□□□ -0.35
Vcan-202ENSMUST00000109544 Cyp46a1Q9WVK8 500 aa12.83□□□□□ -0.35
Vcan-202ENSMUST00000109544 Gsdma3Q5Y4Y6 464 aa12.83□□□□□ -0.36
Vcan-202ENSMUST00000109544 Prm3Q62100 101 aa12.83□□□□□ -0.36
Vcan-202ENSMUST00000109544 Plcd4Q8K3R3 807 aa12.83□□□□□ -0.36
Vcan-202ENSMUST00000109544 SkilQ60665 675 aa12.83□□□□□ -0.36
Vcan-202ENSMUST00000109544 Dapk1Q80YE7 1442 aa12.83□□□□□ -0.36
Vcan-202ENSMUST00000109544 Ccp110Q7TSH4 1004 aa12.83□□□□□ -0.36
Vcan-202ENSMUST00000109544 NexnQ7TPW1 607 aa12.83□□□□□ -0.36
Vcan-202ENSMUST00000109544 Kif20aP97329 887 aa12.82□□□□□ -0.36
Vcan-202ENSMUST00000109544 Nap1l1P28656 391 aaKnown RBP12.82□□□□□ -0.36
Vcan-202ENSMUST00000109544 Ppp4r3bQ922R5 820 aa12.82□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms