RNA–Protein interactions for RNA: ENSMUST00000064187.11

Thra-201, Transcript of Thyroid hormone receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Thra, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Thra-201ENSMUST00000064187 Rimbp3Q3V0F0 1606 aa27.43■■□□□ 1.98
Thra-201ENSMUST00000064187 Ino80Q6ZPV2 1559 aa27.42■■□□□ 1.98
Thra-201ENSMUST00000064187 Ltbp4Q8K4G1 1666 aa27.41■■□□□ 1.98
Thra-201ENSMUST00000064187 Lamc1P02468 1607 aaKnown RBP27.41■■□□□ 1.98
Thra-201ENSMUST00000064187 Ncoa1P70365 1447 aa27.4■■□□□ 1.98
Thra-201ENSMUST00000064187 Pip4k2bQ80XI4 416 aa27.4■■□□□ 1.98
Thra-201ENSMUST00000064187 Skint5A7XUY5 1461 aa27.4■■□□□ 1.98
Thra-201ENSMUST00000064187 Kif13aQ9EQW7 1749 aa27.38■■□□□ 1.97
Thra-201ENSMUST00000064187 Kdm5aQ3UXZ9 1690 aa27.38■■□□□ 1.97
Thra-201ENSMUST00000064187 Prdm2A2A7B5 1709 aaKnown RBP27.38■■□□□ 1.97
Thra-201ENSMUST00000064187 Scaf11E9PZM7 1456 aaKnown RBP27.37■■□□□ 1.97
Thra-201ENSMUST00000064187 Phlpp1Q8CHE4 1687 aa27.37■■□□□ 1.97
Thra-201ENSMUST00000064187 DroshaQ5HZJ0 1373 aaKnown RBP27.37■■□□□ 1.97
Thra-201ENSMUST00000064187 Mphosph9A6H5Y1 991 aa27.36■■□□□ 1.97
Thra-201ENSMUST00000064187 Calr4Q3TQS0 420 aa27.36■■□□□ 1.97
Thra-201ENSMUST00000064187 Plcd4Q8K3R3 807 aa27.36■■□□□ 1.97
Thra-201ENSMUST00000064187 Itsn1Q9Z0R4 1714 aa27.36■■□□□ 1.97
Thra-201ENSMUST00000064187 Stra8P70278 393 aa27.36■■□□□ 1.97
Thra-201ENSMUST00000064187 Iqgap3F8VQ29 1632 aa27.36■■□□□ 1.97
Thra-201ENSMUST00000064187 Atp7aQ64430 1491 aa27.35■■□□□ 1.97
Thra-201ENSMUST00000064187 Tecpr2Q3UH45 1423 aa27.35■■□□□ 1.97
Thra-201ENSMUST00000064187 Tarbp1E9Q368 1579 aa27.35■■□□□ 1.97
Thra-201ENSMUST00000064187 Erich6D3Z6S9 713 aa27.33■■□□□ 1.97
Thra-201ENSMUST00000064187 Ccdc27Q3V036 639 aa27.33■■□□□ 1.97
Thra-201ENSMUST00000064187 Irx3P81067 507 aa27.31■■□□□ 1.96
Thra-201ENSMUST00000064187 Efcab6Q6P1E8 1516 aa27.3■■□□□ 1.96
Thra-201ENSMUST00000064187 Kif21bQ9QXL1 1668 aa27.29■■□□□ 1.96
Thra-201ENSMUST00000064187 Rims2Q9EQZ7 1530 aa27.28■■□□□ 1.96
Thra-201ENSMUST00000064187 Naip7Q9JIB3 1402 aa27.27■■□□□ 1.96
Thra-201ENSMUST00000064187 Edc4Q3UJB9 1406 aaKnown RBP27.26■■□□□ 1.95
Thra-201ENSMUST00000064187 Stk24Q99KH8 431 aa27.26■■□□□ 1.95
Thra-201ENSMUST00000064187 Arid4bA2CG63 1314 aaKnown RBP27.25■■□□□ 1.95
Thra-201ENSMUST00000064187 Dhx9O70133 1380 aaKnown RBP27.24■■□□□ 1.95
Thra-201ENSMUST00000064187 Uggt1Q6P5E4 1551 aa27.24■■□□□ 1.95
Thra-201ENSMUST00000064187 Sall3Q62255 1320 aa27.21■■□□□ 1.95
Thra-201ENSMUST00000064187 Ccer2J3QPU5 274 aa27.2■■□□□ 1.94
Thra-201ENSMUST00000064187 Txndc2Q6P902 515 aa27.19■■□□□ 1.94
Thra-201ENSMUST00000064187 Abca8aQ8K442 1620 aa27.19■■□□□ 1.94
Thra-201ENSMUST00000064187 Pik3c2gO70167 1506 aa27.19■■□□□ 1.94
Thra-201ENSMUST00000064187 ErbinQ80TH2 1402 aa27.18■■□□□ 1.94
Thra-201ENSMUST00000064187 Pkd2O35245 966 aa27.16■■□□□ 1.94
Thra-201ENSMUST00000064187 Mroh1E0CZ22 1640 aa27.15■■□□□ 1.94
Thra-201ENSMUST00000064187 Rapgef3Q8VCC8 918 aa27.15■■□□□ 1.94
Thra-201ENSMUST00000064187 Ehbp1l1Q99MS7 1716 aa27.15■■□□□ 1.94
Thra-201ENSMUST00000064187 Prrc2bQ7TPM1 1486 aaKnown RBP27.15■■□□□ 1.94
Thra-201ENSMUST00000064187 Gemin5Q8BX17 1502 aaKnown RBP27.14■■□□□ 1.93
Thra-201ENSMUST00000064187 AatkQ80YE4 1365 aa27.13■■□□□ 1.93
Thra-201ENSMUST00000064187 Eif2ak4Q9QZ05 1648 aa27.12■■□□□ 1.93
Thra-201ENSMUST00000064187 Iqgap1Q9JKF1 1657 aaKnown RBP27.12■■□□□ 1.93
Thra-201ENSMUST00000064187 Ipo4Q8VI75 1082 aa27.11■■□□□ 1.93
Thra-201ENSMUST00000064187 P3h3Q8CG70 732 aa27.1■■□□□ 1.93
Thra-201ENSMUST00000064187 Gli3Q61602 1583 aa27.09■■□□□ 1.93
Thra-201ENSMUST00000064187 Nrxn3Q6P9K9 1571 aa27.09■■□□□ 1.93
Thra-201ENSMUST00000064187 PplQ9R269 1755 aa27.08■■□□□ 1.93
Thra-201ENSMUST00000064187 IghaA0A0A6YXW6 389 aa27.08■■□□□ 1.93
Thra-201ENSMUST00000064187 Psme1P97371 249 aa27.07■■□□□ 1.92
Thra-201ENSMUST00000064187 Dot1lQ6XZL8 1540 aa27.07■■□□□ 1.92
Thra-201ENSMUST00000064187 Myo3aQ8K3H5 1613 aa27.06■■□□□ 1.92
Thra-201ENSMUST00000064187 Zc3h13E9Q784 1729 aaKnown RBP27.05■■□□□ 1.92
Thra-201ENSMUST00000064187 Washc2Q6PGL7 1334 aa27.05■■□□□ 1.92
Thra-201ENSMUST00000064187 Tubgcp6G5E8P0 1769 aa27.02■■□□□ 1.92
Thra-201ENSMUST00000064187 Wdr43Q6ZQL4 677 aaKnown RBP27.02■■□□□ 1.92
Thra-201ENSMUST00000064187 Med1Q925J9 1575 aa27.02■■□□□ 1.92
Thra-201ENSMUST00000064187 Lmtk3Q5XJV6 1424 aa27.01■■□□□ 1.92
Thra-201ENSMUST00000064187 PzpQ61838 1495 aa27.01■■□□□ 1.91
Thra-201ENSMUST00000064187 Gm13695A2AK44 830 aa27.01■■□□□ 1.91
Thra-201ENSMUST00000064187 Ppp4r2Q0VGB7 417 aa27■■□□□ 1.91
Thra-201ENSMUST00000064187 Setd1aE9PYH6 1716 aa26.99■■□□□ 1.91
Thra-201ENSMUST00000064187 Ppip5k1A2ARP1 1436 aa26.99■■□□□ 1.91
Thra-201ENSMUST00000064187 AU022751B1B0V2 589 aa26.99■■□□□ 1.91
Thra-201ENSMUST00000064187 PalldQ9ET54 1408 aa26.99■■□□□ 1.91
Thra-201ENSMUST00000064187 Rprd2Q6NXI6 1469 aaKnown RBP26.98■■□□□ 1.91
Thra-201ENSMUST00000064187 Hsp90aa1P07901 733 aaKnown RBP26.97■■□□□ 1.91
Thra-201ENSMUST00000064187 Asxl2Q8BZ32 1370 aa26.95■■□□□ 1.9
Thra-201ENSMUST00000064187 Fbxo41Q6NS60 873 aa26.94■■□□□ 1.9
Thra-201ENSMUST00000064187 Pak3Q61036 559 aa26.94■■□□□ 1.9
Thra-201ENSMUST00000064187 Eid3Q3V124 375 aa26.93■■□□□ 1.9
Thra-201ENSMUST00000064187 Arhgef28P97433 1693 aa26.92■■□□□ 1.9
Thra-201ENSMUST00000064187 Myom1Q62234 1667 aaKnown RBP26.92■■□□□ 1.9
Thra-201ENSMUST00000064187 Slit3Q9WVB4 1523 aa26.91■■□□□ 1.9
Thra-201ENSMUST00000064187 Mroh3A0A1D5RM54 893 aa26.91■■□□□ 1.9
Thra-201ENSMUST00000064187 Thsd7aQ69ZU6 1645 aa26.9■■□□□ 1.9
Thra-201ENSMUST00000064187 Ankrd36D3Z4K0 1415 aa26.9■■□□□ 1.9
Thra-201ENSMUST00000064187 Liat1Q810M6 228 aa26.89■■□□□ 1.89
Thra-201ENSMUST00000064187 Egfem1Q8C088 590 aa26.88■■□□□ 1.89
Thra-201ENSMUST00000064187 Rock1P70335 1354 aa26.87■■□□□ 1.89
Thra-201ENSMUST00000064187 Plxnc1Q9QZC2 1574 aa26.86■■□□□ 1.89
Thra-201ENSMUST00000064187 Atp1b4Q99ME6 356 aa26.85■■□□□ 1.89
Thra-201ENSMUST00000064187 Usp47Q8BY87 1376 aa26.83■■□□□ 1.89
Thra-201ENSMUST00000064187 Q9D9H8 365 aa26.82■■□□□ 1.88
Thra-201ENSMUST00000064187 Shq1Q7TMX5 569 aa26.8■■□□□ 1.88
Thra-201ENSMUST00000064187 Hspa1lP16627 641 aa26.8■■□□□ 1.88
Thra-201ENSMUST00000064187 Tulp4Q9JIL5 1547 aa26.79■■□□□ 1.88
Thra-201ENSMUST00000064187 Rims1Q99NE5 1463 aa26.79■■□□□ 1.88
Thra-201ENSMUST00000064187 Adamts13Q769J6 1426 aa26.79■■□□□ 1.88
Thra-201ENSMUST00000064187 Rgl3Q3UYI5 709 aa26.77■■□□□ 1.88
Thra-201ENSMUST00000064187 Amigo3Q8C2S7 508 aa26.77■■□□□ 1.88
Thra-201ENSMUST00000064187 Hspa5P20029 655 aaKnown RBP26.76■■□□□ 1.87
Thra-201ENSMUST00000064187 Ipo9Q91YE6 1041 aa26.76■■□□□ 1.87
Thra-201ENSMUST00000064187 Col18a1P39061 1774 aa26.73■■□□□ 1.87
Retrieved 100 of 22,080 RNA–protein pairs in 69 ms