RNA–Protein interactions for RNA: ENSMUST00000064187.11

Thra-201, Transcript of Thyroid hormone receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Thra, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Thra-201ENSMUST00000064187 Gm35339A0A140LHH9 1649 aa41.83■■■■■ 4.29
Thra-201ENSMUST00000064187 NischQ80TM9 1593 aa41.32■■■■■ 4.21
Thra-201ENSMUST00000064187 Abcc9P70170 1546 aa40■■■■□ 3.99
Thra-201ENSMUST00000064187 Abcc8B2RUS7 1588 aa39.95■■■■□ 3.99
Thra-201ENSMUST00000064187 ScribQ80U72 1612 aa38.5■■■■□ 3.75
Thra-201ENSMUST00000064187 NacadQ5SWP3 1504 aa37.23■■■■□ 3.55
Thra-201ENSMUST00000064187 Kdm5dQ62240 1548 aa37.21■■■■□ 3.55
Thra-201ENSMUST00000064187 Dcaf1Q80TR8 1506 aa36.73■■■■□ 3.47
Thra-201ENSMUST00000064187 Sycp2Q9CUU3 1500 aa36.52■■■■□ 3.44
Thra-201ENSMUST00000064187 BicraF8VPZ9 1578 aa36.04■■■■□ 3.36
Thra-201ENSMUST00000064187 Rb1cc1Q9ESK9 1588 aa36.01■■■■□ 3.36
Thra-201ENSMUST00000064187 Rhox8Q6VSS7 320 aa35.76■■■■□ 3.31
Thra-201ENSMUST00000064187 Baz1aO88379 1555 aa35.5■■■■□ 3.27
Thra-201ENSMUST00000064187 Ccdc180J3QNE4 1664 aa35.47■■■■□ 3.27
Thra-201ENSMUST00000064187 Crybg2B7ZCC2 1516 aa35.35■■■■□ 3.25
Thra-201ENSMUST00000064187 Dnajc5bQ9CQ94 199 aa34.97■■■■□ 3.19
Thra-201ENSMUST00000064187 Zcchc6Q5BLK4 1491 aaKnown RBP34.97■■■■□ 3.19
Thra-201ENSMUST00000064187 Pds5bQ4VA53 1446 aaKnown RBP34.93■■■■□ 3.18
Thra-201ENSMUST00000064187 Thoc2B1AZI6 1594 aaKnown RBP34.65■■■■□ 3.14
Thra-201ENSMUST00000064187 Atad2bE9Q166 1460 aaKnown RBP34.64■■■■□ 3.14
Thra-201ENSMUST00000064187 Smarca2Q6DIC0 1577 aa34.49■■■■□ 3.11
Thra-201ENSMUST00000064187 Cecr2E9Q2Z1 1453 aa34.4■■■■□ 3.1
Thra-201ENSMUST00000064187 Smarca4Q3TKT4 1613 aaKnown RBP34.4■■■■□ 3.1
Thra-201ENSMUST00000064187 Iqgap2Q3UQ44 1575 aa34.2■■■■□ 3.07
Thra-201ENSMUST00000064187 Ercc6F8VPZ5 1481 aa34.17■■■■□ 3.06
Thra-201ENSMUST00000064187 Cc2d2aQ8CFW7 1633 aa34.1■■■■□ 3.05
Thra-201ENSMUST00000064187 Rpgrip1Q9EPQ2 1331 aa33.97■■■■□ 3.03
Thra-201ENSMUST00000064187 Rtl1Q7M732 1744 aa33.96■■■■□ 3.03
Thra-201ENSMUST00000064187 Wdr62Q3U3T8 1523 aa33.9■■■■□ 3.02
Thra-201ENSMUST00000064187 Frmpd1A2AKB4 1549 aa33.88■■■■□ 3.01
Thra-201ENSMUST00000064187 Fam135aQ6NS59 1506 aa33.87■■■■□ 3.01
Thra-201ENSMUST00000064187 Phldb1Q6PDH0 1371 aaKnown RBP33.63■■■□□ 2.97
Thra-201ENSMUST00000064187 CftrP26361 1476 aa33.6■■■□□ 2.97
Thra-201ENSMUST00000064187 Synj1Q8CHC4 1574 aa33.55■■■□□ 2.96
Thra-201ENSMUST00000064187 Cttnbp2B9EJA2 1648 aa33.52■■■□□ 2.96
Thra-201ENSMUST00000064187 Ccdc136Q3TVA9 1136 aa33.51■■■□□ 2.95
Thra-201ENSMUST00000064187 Brd4Q9ESU6 1400 aaKnown RBP33.48■■■□□ 2.95
Thra-201ENSMUST00000064187 Unc13aQ4KUS2 1712 aa33.45■■■□□ 2.95
Thra-201ENSMUST00000064187 Baz1bQ9Z277 1479 aa33.38■■■□□ 2.93
Thra-201ENSMUST00000064187 Ubl4bQ9CQ84 188 aa33.33■■■□□ 2.93
Thra-201ENSMUST00000064187 Mrc2Q64449 1479 aa33.05■■■□□ 2.88
Thra-201ENSMUST00000064187 Esf1Q3V1V3 845 aaKnown RBP32.94■■■□□ 2.86
Thra-201ENSMUST00000064187 Trim41Q5NCC3 630 aa32.93■■■□□ 2.86
Thra-201ENSMUST00000064187 Rsf1E9PWW9 1441 aaKnown RBP32.72■■■□□ 2.83
Thra-201ENSMUST00000064187 Kif15Q6P9L6 1387 aa32.67■■■□□ 2.82
Thra-201ENSMUST00000064187 Cux2P70298 1426 aa32.64■■■□□ 2.82
Thra-201ENSMUST00000064187 Lamc3Q9R0B6 1581 aa32.58■■■□□ 2.81
Thra-201ENSMUST00000064187 Acin1Q9JIX8 1338 aaKnown RBP32.45■■■□□ 2.79
Thra-201ENSMUST00000064187 Kif21aQ9QXL2 1672 aa32.37■■■□□ 2.77
Thra-201ENSMUST00000064187 Golga3P55937 1487 aa32.37■■■□□ 2.77
Thra-201ENSMUST00000064187 Lrriq1Q0P5X1 1673 aa32.36■■■□□ 2.77
Thra-201ENSMUST00000064187 Top2bQ64511 1612 aa32.35■■■□□ 2.77
Thra-201ENSMUST00000064187 Npm1Q61937 292 aaKnown RBP32.26■■■□□ 2.76
Thra-201ENSMUST00000064187 TnnQ80Z71 1560 aa32.25■■■□□ 2.75
Thra-201ENSMUST00000064187 Pcgf6Q99NA9 353 aa32.22■■■□□ 2.75
Thra-201ENSMUST00000064187 Cngb1E1AZ71 1325 aa32.22■■■□□ 2.75
Thra-201ENSMUST00000064187 Cep164Q5DU05 1446 aa32.16■■■□□ 2.74
Thra-201ENSMUST00000064187 Ccdc18Q640L5 1455 aa32.04■■■□□ 2.72
Thra-201ENSMUST00000064187 Il27Q8K3I6 234 aa32.02■■■□□ 2.72
Thra-201ENSMUST00000064187 Camsap1A2AHC3 1581 aa32.01■■■□□ 2.71
Thra-201ENSMUST00000064187 Fmn1Q05860 1466 aa31.97■■■□□ 2.71
Thra-201ENSMUST00000064187 Dhx29Q6PGC1 1365 aaKnown RBP31.96■■■□□ 2.71
Thra-201ENSMUST00000064187 LrpprcQ6PB66 1392 aaKnown RBP31.91■■■□□ 2.7
Thra-201ENSMUST00000064187 Urb2E9Q7L1 1524 aaKnown RBP31.89■■■□□ 2.7
Thra-201ENSMUST00000064187 Eif4g3Q80XI3 1579 aaKnown RBP31.87■■■□□ 2.69
Thra-201ENSMUST00000064187 Plb1Q3TTY0 1478 aa31.85■■■□□ 2.69
Thra-201ENSMUST00000064187 Crocc2F6XLV1 1638 aa31.79■■■□□ 2.68
Thra-201ENSMUST00000064187 PogzQ8BZH4 1409 aaKnown RBP31.74■■■□□ 2.67
Thra-201ENSMUST00000064187 Duox2A2AQ99 1517 aa31.6■■■□□ 2.65
Thra-201ENSMUST00000064187 Grin2bQ01097 1482 aa31.59■■■□□ 2.65
Thra-201ENSMUST00000064187 Ccdc88bQ4QRL3 1481 aa31.58■■■□□ 2.65
Thra-201ENSMUST00000064187 Ift140E9PY46 1464 aa31.53■■■□□ 2.64
Thra-201ENSMUST00000064187 Dnajc5P60904 198 aa31.46■■■□□ 2.63
Thra-201ENSMUST00000064187 Shroom2A2ALU4 1481 aa31.42■■■□□ 2.62
Thra-201ENSMUST00000064187 Rusc2Q80U22 1514 aa31.41■■■□□ 2.62
Thra-201ENSMUST00000064187 Top2aQ01320 1528 aaKnown RBP31.39■■■□□ 2.62
Thra-201ENSMUST00000064187 Disp1Q3TDN0 1521 aa31.38■■■□□ 2.61
Thra-201ENSMUST00000064187 Chic1Q8CBW7 227 aa31.38■■■□□ 2.61
Thra-201ENSMUST00000064187 Samd9lQ69Z37 1561 aa31.37■■■□□ 2.61
Thra-201ENSMUST00000064187 Efcab5A0JP43 1406 aa31.36■■■□□ 2.61
Thra-201ENSMUST00000064187 Las1lA2BE28 776 aaKnown RBP31.29■■■□□ 2.6
Thra-201ENSMUST00000064187 Setd1bQ8CFT2 1985 aa31.26■■■□□ 2.59
Thra-201ENSMUST00000064187 NrkQ9R0G8 1455 aa31.25■■■□□ 2.59
Thra-201ENSMUST00000064187 Nup160Q9Z0W3 1402 aaKnown RBP31.22■■■□□ 2.59
Thra-201ENSMUST00000064187 Pbrm1Q8BSQ9 1634 aaKnown RBP31.18■■■□□ 2.58
Thra-201ENSMUST00000064187 Neurod1Q60867 357 aa31.18■■■□□ 2.58
Thra-201ENSMUST00000064187 Rad54l2Q99NG0 1466 aa31.17■■■□□ 2.58
Thra-201ENSMUST00000064187 PtprkP35822 1457 aa31.15■■■□□ 2.58
Thra-201ENSMUST00000064187 Cc2d2bA0A286YDU8 1405 aa31.13■■■□□ 2.57
Thra-201ENSMUST00000064187 Pabpn1Q8CCS6 302 aaKnown RBP31.12■■■□□ 2.57
Thra-201ENSMUST00000064187 Myt1Q8CFC2 1127 aa31.12■■■□□ 2.57
Thra-201ENSMUST00000064187 Shroom4Q1W617 1475 aa31.11■■■□□ 2.57
Thra-201ENSMUST00000064187 Magi3Q9EQJ9 1476 aa31.08■■■□□ 2.57
Thra-201ENSMUST00000064187 Grin2aP35436 1464 aa31.05■■■□□ 2.56
Thra-201ENSMUST00000064187 Supt5hO55201 1082 aaKnown RBP31■■■□□ 2.55
Thra-201ENSMUST00000064187 Col17a1Q07563 1470 aa30.99■■■□□ 2.55
Thra-201ENSMUST00000064187 Pelp1Q9DBD5 1123 aaKnown RBP30.95■■■□□ 2.54
Thra-201ENSMUST00000064187 AqrQ8CFQ3 1481 aaKnown RBP30.94■■■□□ 2.54
Thra-201ENSMUST00000064187 SynmQ70IV5 1561 aa30.92■■■□□ 2.54
Thra-201ENSMUST00000064187 Ehmt2Q9Z148 1263 aaKnown RBP30.91■■■□□ 2.54
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms