RNA–Protein interactions for RNA: ENSMUST00000041569.4

Ccdc113-201, Transcript of Coiled-coil domain-containing protein 113, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc113, Length 1,288 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc113-201ENSMUST00000041569 Nrxn3Q6P9K9 1571 aa19.15■□□□□ 0.66
Ccdc113-201ENSMUST00000041569 Dhx9O70133 1380 aaKnown RBP19.14■□□□□ 0.65
Ccdc113-201ENSMUST00000041569 Myo3aQ8K3H5 1613 aa19.14■□□□□ 0.65
Ccdc113-201ENSMUST00000041569 Arid4bA2CG63 1314 aaKnown RBP19.13■□□□□ 0.65
Ccdc113-201ENSMUST00000041569 Lmtk3Q5XJV6 1424 aa19.12■□□□□ 0.65
Ccdc113-201ENSMUST00000041569 ErbinQ80TH2 1402 aa19.12■□□□□ 0.65
Ccdc113-201ENSMUST00000041569 Med1Q925J9 1575 aa19.11■□□□□ 0.65
Ccdc113-201ENSMUST00000041569 Prrc2bQ7TPM1 1486 aaKnown RBP19.11■□□□□ 0.65
Ccdc113-201ENSMUST00000041569 Ccer2J3QPU5 274 aa19.11■□□□□ 0.65
Ccdc113-201ENSMUST00000041569 Stk24Q99KH8 431 aa19.11■□□□□ 0.65
Ccdc113-201ENSMUST00000041569 Dot1lQ6XZL8 1540 aa19.1■□□□□ 0.65
Ccdc113-201ENSMUST00000041569 Sall3Q62255 1320 aa19.1■□□□□ 0.65
Ccdc113-201ENSMUST00000041569 Rapgef3Q8VCC8 918 aa19.1■□□□□ 0.65
Ccdc113-201ENSMUST00000041569 Txndc2Q6P902 515 aa19.09■□□□□ 0.65
Ccdc113-201ENSMUST00000041569 PzpQ61838 1495 aa19.09■□□□□ 0.65
Ccdc113-201ENSMUST00000041569 AatkQ80YE4 1365 aa19.08■□□□□ 0.65
Ccdc113-201ENSMUST00000041569 Myom1Q62234 1667 aaKnown RBP19.08■□□□□ 0.64
Ccdc113-201ENSMUST00000041569 Pkd2O35245 966 aa19.07■□□□□ 0.64
Ccdc113-201ENSMUST00000041569 Rprd2Q6NXI6 1469 aaKnown RBP19.05■□□□□ 0.64
Ccdc113-201ENSMUST00000041569 Thsd7aQ69ZU6 1645 aa19.05■□□□□ 0.64
Ccdc113-201ENSMUST00000041569 Mier1Q5UAK0 511 aa19.05■□□□□ 0.64
Ccdc113-201ENSMUST00000041569 Ppip5k1A2ARP1 1436 aa19.04■□□□□ 0.64
Ccdc113-201ENSMUST00000041569 Arhgef28P97433 1693 aa19.04■□□□□ 0.64
Ccdc113-201ENSMUST00000041569 PalldQ9ET54 1408 aa19.03■□□□□ 0.64
Ccdc113-201ENSMUST00000041569 IghaA0A0A6YXW6 389 aa19.03■□□□□ 0.64
Ccdc113-201ENSMUST00000041569 Plxnc1Q9QZC2 1574 aa19.02■□□□□ 0.63
Ccdc113-201ENSMUST00000041569 Slit3Q9WVB4 1523 aa19.01■□□□□ 0.63
Ccdc113-201ENSMUST00000041569 Psme1P97371 249 aa19■□□□□ 0.63
Ccdc113-201ENSMUST00000041569 P3h3Q8CG70 732 aa19■□□□□ 0.63
Ccdc113-201ENSMUST00000041569 Fbxo41Q6NS60 873 aa18.99■□□□□ 0.63
Ccdc113-201ENSMUST00000041569 Hdac5Q9Z2V6 1113 aa18.98■□□□□ 0.63
Ccdc113-201ENSMUST00000041569 Gm13695A2AK44 830 aa18.96■□□□□ 0.63
Ccdc113-201ENSMUST00000041569 AU022751B1B0V2 589 aa18.96■□□□□ 0.63
Ccdc113-201ENSMUST00000041569 Ankrd36D3Z4K0 1415 aa18.95■□□□□ 0.62
Ccdc113-201ENSMUST00000041569 Hoxd11P23813 323 aa18.93■□□□□ 0.62
Ccdc113-201ENSMUST00000041569 Washc2Q6PGL7 1334 aa18.93■□□□□ 0.62
Ccdc113-201ENSMUST00000041569 Rock1P70335 1354 aa18.93■□□□□ 0.62
Ccdc113-201ENSMUST00000041569 Asxl2Q8BZ32 1370 aa18.93■□□□□ 0.62
Ccdc113-201ENSMUST00000041569 Col18a1P39061 1774 aa18.92■□□□□ 0.62
Ccdc113-201ENSMUST00000041569 Iqsec2Q5DU25 1478 aa18.91■□□□□ 0.62
Ccdc113-201ENSMUST00000041569 Rims1Q99NE5 1463 aa18.9■□□□□ 0.62
Ccdc113-201ENSMUST00000041569 Tulp4Q9JIL5 1547 aa18.9■□□□□ 0.62
Ccdc113-201ENSMUST00000041569 MaddQ80U28 1577 aa18.9■□□□□ 0.62
Ccdc113-201ENSMUST00000041569 Arap3Q8R5G7 1538 aa18.9■□□□□ 0.62
Ccdc113-201ENSMUST00000041569 Mroh3A0A1D5RM54 893 aa18.89■□□□□ 0.61
Ccdc113-201ENSMUST00000041569 Adamts13Q769J6 1426 aa18.88■□□□□ 0.61
Ccdc113-201ENSMUST00000041569 Usp47Q8BY87 1376 aa18.86■□□□□ 0.61
Ccdc113-201ENSMUST00000041569 Eid3Q3V124 375 aa18.85■□□□□ 0.61
Ccdc113-201ENSMUST00000041569 Cep152A2AUM9 1736 aaKnown RBP18.84■□□□□ 0.61
Ccdc113-201ENSMUST00000041569 Hspa1lP16627 641 aa18.84■□□□□ 0.61
Ccdc113-201ENSMUST00000041569 Pik3r4Q8VD65 1358 aa18.83■□□□□ 0.61
Ccdc113-201ENSMUST00000041569 Q9D9H8 365 aa18.83■□□□□ 0.6
Ccdc113-201ENSMUST00000041569 Mbd5B1AYB6 1498 aa18.83■□□□□ 0.6
Ccdc113-201ENSMUST00000041569 Ift172Q6VH22 1749 aa18.83■□□□□ 0.6
Ccdc113-201ENSMUST00000041569 Unc13bQ9Z1N9 1602 aa18.82■□□□□ 0.6
Ccdc113-201ENSMUST00000041569 Shq1Q7TMX5 569 aa18.82■□□□□ 0.6
Ccdc113-201ENSMUST00000041569 Amigo3Q8C2S7 508 aa18.82■□□□□ 0.6
Ccdc113-201ENSMUST00000041569 Atp1b4Q99ME6 356 aa18.82■□□□□ 0.6
Ccdc113-201ENSMUST00000041569 Tns3Q5SSZ5 1440 aa18.82■□□□□ 0.6
Ccdc113-201ENSMUST00000041569 Cdk5rap2Q8K389 1822 aa18.81■□□□□ 0.6
Ccdc113-201ENSMUST00000041569 Cdk13Q69ZA1 1511 aaKnown RBP18.79■□□□□ 0.6
Ccdc113-201ENSMUST00000041569 Cps1Q8C196 1500 aa18.79■□□□□ 0.6
Ccdc113-201ENSMUST00000041569 Rgl3Q3UYI5 709 aa18.77■□□□□ 0.6
Ccdc113-201ENSMUST00000041569 Hspa5P20029 655 aaKnown RBP18.76■□□□□ 0.59
Ccdc113-201ENSMUST00000041569 DnmbpQ6TXD4 1580 aa18.76■□□□□ 0.59
Ccdc113-201ENSMUST00000041569 Col14a1Q80X19 1797 aa18.76■□□□□ 0.59
Ccdc113-201ENSMUST00000041569 Sipa1l1Q8C0T5 1782 aa18.76■□□□□ 0.59
Ccdc113-201ENSMUST00000041569 Slc52a2Q9D8F3 450 aa18.74■□□□□ 0.59
Ccdc113-201ENSMUST00000041569 Kif20bQ80WE4 1774 aaKnown RBP18.73■□□□□ 0.59
Ccdc113-201ENSMUST00000041569 NalcnQ8BXR5 1738 aa18.73■□□□□ 0.59
Ccdc113-201ENSMUST00000041569 Ifit1bl1D3Z6F0 470 aa18.72■□□□□ 0.59
Ccdc113-201ENSMUST00000041569 Trap1aP19473 224 aa18.72■□□□□ 0.59
Ccdc113-201ENSMUST00000041569 Itsn2Q9Z0R6 1659 aa18.71■□□□□ 0.59
Ccdc113-201ENSMUST00000041569 Bcl11bQ99PV8 884 aa18.71■□□□□ 0.59
Ccdc113-201ENSMUST00000041569 HnrnpmQ9D0E1 729 aaKnown RBP18.71■□□□□ 0.59
Ccdc113-201ENSMUST00000041569 Nwd1A6H603 1563 aa18.71■□□□□ 0.59
Ccdc113-201ENSMUST00000041569 Slain2Q8CI08 581 aa18.7■□□□□ 0.58
Ccdc113-201ENSMUST00000041569 Brinp3Q499E0 766 aa18.69■□□□□ 0.58
Ccdc113-201ENSMUST00000041569 Ecm2Q5FW85 670 aa18.69■□□□□ 0.58
Ccdc113-201ENSMUST00000041569 Usp32F8VPZ3 1604 aa18.68■□□□□ 0.58
Ccdc113-201ENSMUST00000041569 Lrrc7Q80TE7 1490 aa18.68■□□□□ 0.58
Ccdc113-201ENSMUST00000041569 D430041D05RikF6ZGR6 1678 aa18.67■□□□□ 0.58
Ccdc113-201ENSMUST00000041569 Pik3c2aQ61194 1686 aa18.67■□□□□ 0.58
Ccdc113-201ENSMUST00000041569 Kdm2aP59997 1161 aa18.67■□□□□ 0.58
Ccdc113-201ENSMUST00000041569 Cep170bQ80U49 1574 aa18.67■□□□□ 0.58
Ccdc113-201ENSMUST00000041569 Tmem94Q7TSH8 1360 aa18.67■□□□□ 0.58
Ccdc113-201ENSMUST00000041569 Evi5lH3BKQ3 813 aa18.66■□□□□ 0.58
Ccdc113-201ENSMUST00000041569 Fan1Q69ZT1 1020 aa18.66■□□□□ 0.58
Ccdc113-201ENSMUST00000041569 Rreb1Q3UH06 1700 aaKnown RBP18.66■□□□□ 0.58
Ccdc113-201ENSMUST00000041569 Srpk2O54781 681 aaKnown RBP18.65■□□□□ 0.58
Ccdc113-201ENSMUST00000041569 C3P01027 1663 aa18.65■□□□□ 0.58
Ccdc113-201ENSMUST00000041569 Grwd1Q810D6 446 aaKnown RBP18.64■□□□□ 0.57
Ccdc113-201ENSMUST00000041569 Puf60Q3UEB3 564 aaKnown RBP18.63■□□□□ 0.57
Ccdc113-201ENSMUST00000041569 Stk26Q99JT2 416 aa18.62■□□□□ 0.57
Ccdc113-201ENSMUST00000041569 Polr3aB2RXC6 1390 aa18.61■□□□□ 0.57
Ccdc113-201ENSMUST00000041569 Utp14aQ640M1 767 aaKnown RBP18.61■□□□□ 0.57
Ccdc113-201ENSMUST00000041569 Abca14E9Q8F8 1683 aa18.6■□□□□ 0.57
Ccdc113-201ENSMUST00000041569 Pik3c2bE9QAN8 1632 aa18.6■□□□□ 0.57
Ccdc113-201ENSMUST00000041569 Plekhg1F6S200 1446 aa18.6■□□□□ 0.57
Ccdc113-201ENSMUST00000041569 Os9Q8K2C7 672 aa18.6■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms