RNA–Protein interactions for RNA: ENSMUST00000041569.4

Ccdc113-201, Transcript of Coiled-coil domain-containing protein 113, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc113, Length 1,288 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc113-201ENSMUST00000041569 Gm35339A0A140LHH9 1649 aa29.68■■■□□ 2.34
Ccdc113-201ENSMUST00000041569 NischQ80TM9 1593 aa29.18■■■□□ 2.26
Ccdc113-201ENSMUST00000041569 Abcc9P70170 1546 aa28.28■■■□□ 2.12
Ccdc113-201ENSMUST00000041569 Abcc8B2RUS7 1588 aa28.23■■■□□ 2.11
Ccdc113-201ENSMUST00000041569 ScribQ80U72 1612 aa27.26■■□□□ 1.95
Ccdc113-201ENSMUST00000041569 Kdm5dQ62240 1548 aa26.31■■□□□ 1.8
Ccdc113-201ENSMUST00000041569 NacadQ5SWP3 1504 aa26.3■■□□□ 1.8
Ccdc113-201ENSMUST00000041569 Chic1Q8CBW7 227 aa26.03■■□□□ 1.76
Ccdc113-201ENSMUST00000041569 Dcaf1Q80TR8 1506 aa25.99■■□□□ 1.75
Ccdc113-201ENSMUST00000041569 Sycp2Q9CUU3 1500 aa25.81■■□□□ 1.72
Ccdc113-201ENSMUST00000041569 Mapk8ip2Q9ERE9 830 aa25.78■■□□□ 1.72
Ccdc113-201ENSMUST00000041569 BicraF8VPZ9 1578 aa25.49■■□□□ 1.67
Ccdc113-201ENSMUST00000041569 Rb1cc1Q9ESK9 1588 aa25.46■■□□□ 1.67
Ccdc113-201ENSMUST00000041569 Ccdc180J3QNE4 1664 aa25.2■■□□□ 1.62
Ccdc113-201ENSMUST00000041569 Baz1aO88379 1555 aa25.1■■□□□ 1.61
Ccdc113-201ENSMUST00000041569 Rhox8Q6VSS7 320 aa25.07■■□□□ 1.6
Ccdc113-201ENSMUST00000041569 Crybg2B7ZCC2 1516 aa24.99■■□□□ 1.59
Ccdc113-201ENSMUST00000041569 Pds5bQ4VA53 1446 aaKnown RBP24.66■■□□□ 1.54
Ccdc113-201ENSMUST00000041569 Zcchc6Q5BLK4 1491 aaKnown RBP24.64■■□□□ 1.53
Ccdc113-201ENSMUST00000041569 Dnajc5bQ9CQ94 199 aa24.6■■□□□ 1.53
Ccdc113-201ENSMUST00000041569 Thoc2B1AZI6 1594 aaKnown RBP24.54■■□□□ 1.52
Ccdc113-201ENSMUST00000041569 Atad2bE9Q166 1460 aaKnown RBP24.46■■□□□ 1.51
Ccdc113-201ENSMUST00000041569 Smarca2Q6DIC0 1577 aa24.4■■□□□ 1.5
Ccdc113-201ENSMUST00000041569 Smarca4Q3TKT4 1613 aaKnown RBP24.32■■□□□ 1.48
Ccdc113-201ENSMUST00000041569 Cecr2E9Q2Z1 1453 aa24.26■■□□□ 1.47
Ccdc113-201ENSMUST00000041569 Iqgap2Q3UQ44 1575 aa24.19■■□□□ 1.46
Ccdc113-201ENSMUST00000041569 Ercc6F8VPZ5 1481 aa24.13■■□□□ 1.45
Ccdc113-201ENSMUST00000041569 Cc2d2aQ8CFW7 1633 aa24.12■■□□□ 1.45
Ccdc113-201ENSMUST00000041569 Rtl1Q7M732 1744 aa24.12■■□□□ 1.45
Ccdc113-201ENSMUST00000041569 Wdr62Q3U3T8 1523 aa23.98■■□□□ 1.43
Ccdc113-201ENSMUST00000041569 Fam135aQ6NS59 1506 aa23.98■■□□□ 1.43
Ccdc113-201ENSMUST00000041569 Frmpd1A2AKB4 1549 aa23.92■■□□□ 1.42
Ccdc113-201ENSMUST00000041569 Unc13aQ4KUS2 1712 aa23.74■■□□□ 1.39
Ccdc113-201ENSMUST00000041569 Cttnbp2B9EJA2 1648 aa23.73■■□□□ 1.39
Ccdc113-201ENSMUST00000041569 Phldb1Q6PDH0 1371 aaKnown RBP23.72■■□□□ 1.39
Ccdc113-201ENSMUST00000041569 CftrP26361 1476 aa23.71■■□□□ 1.39
Ccdc113-201ENSMUST00000041569 Synj1Q8CHC4 1574 aa23.69■■□□□ 1.38
Ccdc113-201ENSMUST00000041569 Baz1bQ9Z277 1479 aa23.66■■□□□ 1.38
Ccdc113-201ENSMUST00000041569 Brd4Q9ESU6 1400 aaKnown RBP23.6■■□□□ 1.37
Ccdc113-201ENSMUST00000041569 Ccdc136Q3TVA9 1136 aa23.49■■□□□ 1.35
Ccdc113-201ENSMUST00000041569 Phf23Q8BSN5 401 aa23.45■■□□□ 1.34
Ccdc113-201ENSMUST00000041569 Ubl4bQ9CQ84 188 aa23.43■■□□□ 1.34
Ccdc113-201ENSMUST00000041569 Mrc2Q64449 1479 aa23.36■■□□□ 1.33
Ccdc113-201ENSMUST00000041569 Trim41Q5NCC3 630 aa23.13■■□□□ 1.29
Ccdc113-201ENSMUST00000041569 Esf1Q3V1V3 845 aaKnown RBP23.12■■□□□ 1.29
Ccdc113-201ENSMUST00000041569 Rsf1E9PWW9 1441 aaKnown RBP23.07■■□□□ 1.28
Ccdc113-201ENSMUST00000041569 Lamc3Q9R0B6 1581 aa23.04■■□□□ 1.28
Ccdc113-201ENSMUST00000041569 Kif15Q6P9L6 1387 aa23.01■■□□□ 1.27
Ccdc113-201ENSMUST00000041569 Cux2P70298 1426 aa22.99■■□□□ 1.27
Ccdc113-201ENSMUST00000041569 Lrriq1Q0P5X1 1673 aa22.92■■□□□ 1.26
Ccdc113-201ENSMUST00000041569 Kif21aQ9QXL2 1672 aa22.92■■□□□ 1.26
Ccdc113-201ENSMUST00000041569 Top2bQ64511 1612 aa22.9■■□□□ 1.26
Ccdc113-201ENSMUST00000041569 TnnQ80Z71 1560 aa22.84■■□□□ 1.25
Ccdc113-201ENSMUST00000041569 Golga3P55937 1487 aa22.82■■□□□ 1.24
Ccdc113-201ENSMUST00000041569 Cep164Q5DU05 1446 aa22.67■■□□□ 1.22
Ccdc113-201ENSMUST00000041569 Npm1Q61937 292 aaKnown RBP22.67■■□□□ 1.22
Ccdc113-201ENSMUST00000041569 Camsap1A2AHC3 1581 aa22.63■■□□□ 1.21
Ccdc113-201ENSMUST00000041569 Cngb1E1AZ71 1325 aa22.6■■□□□ 1.21
Ccdc113-201ENSMUST00000041569 Ccdc18Q640L5 1455 aa22.6■■□□□ 1.21
Ccdc113-201ENSMUST00000041569 Eif4g3Q80XI3 1579 aaKnown RBP22.58■■□□□ 1.2
Ccdc113-201ENSMUST00000041569 Fmn1Q05860 1466 aa22.56■■□□□ 1.2
Ccdc113-201ENSMUST00000041569 Dhx29Q6PGC1 1365 aaKnown RBP22.52■■□□□ 1.2
Ccdc113-201ENSMUST00000041569 Urb2E9Q7L1 1524 aaKnown RBP22.52■■□□□ 1.19
Ccdc113-201ENSMUST00000041569 Crocc2F6XLV1 1638 aa22.49■■□□□ 1.19
Ccdc113-201ENSMUST00000041569 LrpprcQ6PB66 1392 aaKnown RBP22.49■■□□□ 1.19
Ccdc113-201ENSMUST00000041569 Il27Q8K3I6 234 aa22.46■■□□□ 1.19
Ccdc113-201ENSMUST00000041569 Plb1Q3TTY0 1478 aa22.46■■□□□ 1.19
Ccdc113-201ENSMUST00000041569 PogzQ8BZH4 1409 aaKnown RBP22.39■■□□□ 1.17
Ccdc113-201ENSMUST00000041569 Duox2A2AQ99 1517 aa22.29■■□□□ 1.16
Ccdc113-201ENSMUST00000041569 Grin2bQ01097 1482 aa22.28■■□□□ 1.16
Ccdc113-201ENSMUST00000041569 Ift140E9PY46 1464 aa22.26■■□□□ 1.15
Ccdc113-201ENSMUST00000041569 Plppr3Q7TPB0 716 aa22.25■■□□□ 1.15
Ccdc113-201ENSMUST00000041569 Gab3Q8BSM5 595 aa22.25■■□□□ 1.15
Ccdc113-201ENSMUST00000041569 Ccdc88bQ4QRL3 1481 aa22.24■■□□□ 1.15
Ccdc113-201ENSMUST00000041569 Shroom2A2ALU4 1481 aa22.22■■□□□ 1.15
Ccdc113-201ENSMUST00000041569 Rusc2Q80U22 1514 aa22.21■■□□□ 1.15
Ccdc113-201ENSMUST00000041569 Setd1bQ8CFT2 1985 aa22.2■■□□□ 1.14
Ccdc113-201ENSMUST00000041569 Top2aQ01320 1528 aaKnown RBP22.18■■□□□ 1.14
Ccdc113-201ENSMUST00000041569 Samd9lQ69Z37 1561 aa22.17■■□□□ 1.14
Ccdc113-201ENSMUST00000041569 Dnajc5P60904 198 aa22.17■■□□□ 1.14
Ccdc113-201ENSMUST00000041569 Disp1Q3TDN0 1521 aa22.14■■□□□ 1.13
Ccdc113-201ENSMUST00000041569 Pbrm1Q8BSQ9 1634 aaKnown RBP22.12■■□□□ 1.13
Ccdc113-201ENSMUST00000041569 Efcab5A0JP43 1406 aa22.11■■□□□ 1.13
Ccdc113-201ENSMUST00000041569 NrkQ9R0G8 1455 aa22.05■■□□□ 1.12
Ccdc113-201ENSMUST00000041569 Nup160Q9Z0W3 1402 aaKnown RBP22.05■■□□□ 1.12
Ccdc113-201ENSMUST00000041569 Cc2d2bA0A286YDU8 1405 aa21.97■■□□□ 1.11
Ccdc113-201ENSMUST00000041569 Shroom4Q1W617 1475 aa21.96■■□□□ 1.11
Ccdc113-201ENSMUST00000041569 Rad54l2Q99NG0 1466 aa21.96■■□□□ 1.11
Ccdc113-201ENSMUST00000041569 PtprkP35822 1457 aa21.95■■□□□ 1.1
Ccdc113-201ENSMUST00000041569 Magi3Q9EQJ9 1476 aa21.95■■□□□ 1.1
Ccdc113-201ENSMUST00000041569 Grin2aP35436 1464 aa21.91■■□□□ 1.1
Ccdc113-201ENSMUST00000041569 Gpatch8A2A6A1 1505 aa21.9■■□□□ 1.1
Ccdc113-201ENSMUST00000041569 Pabpn1Q8CCS6 302 aaKnown RBP21.9■■□□□ 1.1
Ccdc113-201ENSMUST00000041569 Col17a1Q07563 1470 aa21.9■■□□□ 1.1
Ccdc113-201ENSMUST00000041569 SynmQ70IV5 1561 aa21.86■■□□□ 1.09
Ccdc113-201ENSMUST00000041569 AqrQ8CFQ3 1481 aaKnown RBP21.84■■□□□ 1.09
Ccdc113-201ENSMUST00000041569 Pla2r1Q62028 1487 aa21.82■■□□□ 1.08
Ccdc113-201ENSMUST00000041569 Pelp1Q9DBD5 1123 aaKnown RBP21.74■■□□□ 1.07
Ccdc113-201ENSMUST00000041569 Zcchc11B2RX14 1644 aaKnown RBP21.73■■□□□ 1.07
Ccdc113-201ENSMUST00000041569 Fgd6Q69ZL1 1399 aa21.7■■□□□ 1.06
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms