RNA–Protein interactions for RNA: ENSMUST00000029999.14

Polr1e-201, Transcript of DNA-directed RNA polymerase I subunit RPA49, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Polr1e, Length 1,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1e-201ENSMUST00000029999 Ppip5k1A2ARP1 1436 aa13.76□□□□□ -0.21
Polr1e-201ENSMUST00000029999 Myo3aQ8K3H5 1613 aa13.76□□□□□ -0.21
Polr1e-201ENSMUST00000029999 Myom1Q62234 1667 aaKnown RBP13.76□□□□□ -0.21
Polr1e-201ENSMUST00000029999 Gemin5Q8BX17 1502 aaKnown RBP13.76□□□□□ -0.21
Polr1e-201ENSMUST00000029999 Prrc2bQ7TPM1 1486 aaKnown RBP13.76□□□□□ -0.21
Polr1e-201ENSMUST00000029999 Rprd2Q6NXI6 1469 aaKnown RBP13.75□□□□□ -0.21
Polr1e-201ENSMUST00000029999 AatkQ80YE4 1365 aa13.74□□□□□ -0.21
Polr1e-201ENSMUST00000029999 Usp47Q8BY87 1376 aa13.74□□□□□ -0.21
Polr1e-201ENSMUST00000029999 Arid4bA2CG63 1314 aaKnown RBP13.73□□□□□ -0.21
Polr1e-201ENSMUST00000029999 Washc2Q6PGL7 1334 aa13.73□□□□□ -0.21
Polr1e-201ENSMUST00000029999 Plxnc1Q9QZC2 1574 aa13.73□□□□□ -0.21
Polr1e-201ENSMUST00000029999 Pip4k2bQ80XI4 416 aa13.73□□□□□ -0.21
Polr1e-201ENSMUST00000029999 Iqgap1Q9JKF1 1657 aaKnown RBP13.72□□□□□ -0.21
Polr1e-201ENSMUST00000029999 Txndc2Q6P902 515 aa13.72□□□□□ -0.21
Polr1e-201ENSMUST00000029999 Tulp4Q9JIL5 1547 aa13.71□□□□□ -0.21
Polr1e-201ENSMUST00000029999 Setd1aE9PYH6 1716 aa13.71□□□□□ -0.22
Polr1e-201ENSMUST00000029999 Hspa5P20029 655 aaKnown RBP13.7□□□□□ -0.22
Polr1e-201ENSMUST00000029999 P3h3Q8CG70 732 aa13.7□□□□□ -0.22
Polr1e-201ENSMUST00000029999 Rock1P70335 1354 aa13.7□□□□□ -0.22
Polr1e-201ENSMUST00000029999 Arhgef28P97433 1693 aa13.69□□□□□ -0.22
Polr1e-201ENSMUST00000029999 Adamts13Q769J6 1426 aa13.68□□□□□ -0.22
Polr1e-201ENSMUST00000029999 Hdac5Q9Z2V6 1113 aa13.67□□□□□ -0.22
Polr1e-201ENSMUST00000029999 Med1Q925J9 1575 aa13.67□□□□□ -0.22
Polr1e-201ENSMUST00000029999 Tubgcp6G5E8P0 1769 aa13.67□□□□□ -0.22
Polr1e-201ENSMUST00000029999 Rgl3Q3UYI5 709 aa13.67□□□□□ -0.22
Polr1e-201ENSMUST00000029999 Nrxn3Q6P9K9 1571 aa13.67□□□□□ -0.22
Polr1e-201ENSMUST00000029999 Rims1Q99NE5 1463 aa13.66□□□□□ -0.22
Polr1e-201ENSMUST00000029999 Mroh3A0A1D5RM54 893 aa13.66□□□□□ -0.22
Polr1e-201ENSMUST00000029999 Gm13695A2AK44 830 aa13.66□□□□□ -0.22
Polr1e-201ENSMUST00000029999 AU022751B1B0V2 589 aa13.66□□□□□ -0.22
Polr1e-201ENSMUST00000029999 Psme1P97371 249 aa13.65□□□□□ -0.22
Polr1e-201ENSMUST00000029999 Gli3Q61602 1583 aa13.65□□□□□ -0.22
Polr1e-201ENSMUST00000029999 Slit3Q9WVB4 1523 aa13.64□□□□□ -0.23
Polr1e-201ENSMUST00000029999 IghaA0A0A6YXW6 389 aa13.64□□□□□ -0.23
Polr1e-201ENSMUST00000029999 Lmtk3Q5XJV6 1424 aa13.64□□□□□ -0.23
Polr1e-201ENSMUST00000029999 Asxl2Q8BZ32 1370 aa13.64□□□□□ -0.23
Polr1e-201ENSMUST00000029999 Thsd7aQ69ZU6 1645 aa13.63□□□□□ -0.23
Polr1e-201ENSMUST00000029999 Cep152A2AUM9 1736 aaKnown RBP13.63□□□□□ -0.23
Polr1e-201ENSMUST00000029999 PalldQ9ET54 1408 aa13.63□□□□□ -0.23
Polr1e-201ENSMUST00000029999 MaddQ80U28 1577 aa13.61□□□□□ -0.23
Polr1e-201ENSMUST00000029999 Cdk5rap2Q8K389 1822 aa13.61□□□□□ -0.23
Polr1e-201ENSMUST00000029999 Atp1b4Q99ME6 356 aa13.61□□□□□ -0.23
Polr1e-201ENSMUST00000029999 Cdk13Q69ZA1 1511 aaKnown RBP13.6□□□□□ -0.23
Polr1e-201ENSMUST00000029999 Rapgef3Q8VCC8 918 aa13.59□□□□□ -0.23
Polr1e-201ENSMUST00000029999 Ifit1bl1D3Z6F0 470 aa13.59□□□□□ -0.23
Polr1e-201ENSMUST00000029999 PzpQ61838 1495 aa13.58□□□□□ -0.23
Polr1e-201ENSMUST00000029999 Shq1Q7TMX5 569 aa13.58□□□□□ -0.24
Polr1e-201ENSMUST00000029999 Q9D9H8 365 aa13.58□□□□□ -0.24
Polr1e-201ENSMUST00000029999 Acin1Q9JIX8 1338 aaKnown RBP13.56□□□□□ -0.24
Polr1e-201ENSMUST00000029999 Grwd1Q810D6 446 aaKnown RBP13.56□□□□□ -0.24
Polr1e-201ENSMUST00000029999 Arap3Q8R5G7 1538 aa13.56□□□□□ -0.24
Polr1e-201ENSMUST00000029999 Sipa1l1Q8C0T5 1782 aa13.55□□□□□ -0.24
Polr1e-201ENSMUST00000029999 Ift172Q6VH22 1749 aa13.55□□□□□ -0.24
Polr1e-201ENSMUST00000029999 Neurod1Q60867 357 aa13.55□□□□□ -0.24
Polr1e-201ENSMUST00000029999 Mbd5B1AYB6 1498 aa13.54□□□□□ -0.24
Polr1e-201ENSMUST00000029999 Kdm2aP59997 1161 aa13.53□□□□□ -0.24
Polr1e-201ENSMUST00000029999 Mug2P28666 1451 aa13.53□□□□□ -0.24
Polr1e-201ENSMUST00000029999 Lrrc7Q80TE7 1490 aa13.53□□□□□ -0.24
Polr1e-201ENSMUST00000029999 Cps1Q8C196 1500 aa13.52□□□□□ -0.24
Polr1e-201ENSMUST00000029999 Fan1Q69ZT1 1020 aa13.51□□□□□ -0.25
Polr1e-201ENSMUST00000029999 Os9Q8K2C7 672 aa13.51□□□□□ -0.25
Polr1e-201ENSMUST00000029999 Srpk2O54781 681 aaKnown RBP13.5□□□□□ -0.25
Polr1e-201ENSMUST00000029999 Polr3aB2RXC6 1390 aa13.5□□□□□ -0.25
Polr1e-201ENSMUST00000029999 Pik3r4Q8VD65 1358 aa13.5□□□□□ -0.25
Polr1e-201ENSMUST00000029999 Col18a1P39061 1774 aa13.5□□□□□ -0.25
Polr1e-201ENSMUST00000029999 Tns3Q5SSZ5 1440 aa13.5□□□□□ -0.25
Polr1e-201ENSMUST00000029999 Cpsf1Q9EPU4 1441 aaKnown RBP13.5□□□□□ -0.25
Polr1e-201ENSMUST00000029999 Cep170bQ80U49 1574 aa13.49□□□□□ -0.25
Polr1e-201ENSMUST00000029999 NefmP08553 848 aa13.49□□□□□ -0.25
Polr1e-201ENSMUST00000029999 Slc52a2Q9D8F3 450 aa13.49□□□□□ -0.25
Polr1e-201ENSMUST00000029999 Unc13bQ9Z1N9 1602 aa13.48□□□□□ -0.25
Polr1e-201ENSMUST00000029999 TonslQ6NZL6 1363 aa13.47□□□□□ -0.25
Polr1e-201ENSMUST00000029999 Puf60Q3UEB3 564 aaKnown RBP13.47□□□□□ -0.25
Polr1e-201ENSMUST00000029999 Kif20bQ80WE4 1774 aaKnown RBP13.46□□□□□ -0.25
Polr1e-201ENSMUST00000029999 NalcnQ8BXR5 1738 aa13.46□□□□□ -0.25
Polr1e-201ENSMUST00000029999 Stk26Q99JT2 416 aa13.46□□□□□ -0.25
Polr1e-201ENSMUST00000029999 Usp32F8VPZ3 1604 aa13.45□□□□□ -0.26
Polr1e-201ENSMUST00000029999 Itsn2Q9Z0R6 1659 aa13.45□□□□□ -0.26
Polr1e-201ENSMUST00000029999 Gm20521D3Z5F7 333 aa13.45□□□□□ -0.26
Polr1e-201ENSMUST00000029999 HnrnpmQ9D0E1 729 aaKnown RBP13.45□□□□□ -0.26
Polr1e-201ENSMUST00000029999 DnmbpQ6TXD4 1580 aa13.45□□□□□ -0.26
Polr1e-201ENSMUST00000029999 Abca14E9Q8F8 1683 aa13.45□□□□□ -0.26
Polr1e-201ENSMUST00000029999 Col14a1Q80X19 1797 aa13.44□□□□□ -0.26
Polr1e-201ENSMUST00000029999 RalgapbQ8BQZ4 1484 aa13.44□□□□□ -0.26
Polr1e-201ENSMUST00000029999 Rreb1Q3UH06 1700 aaKnown RBP13.44□□□□□ -0.26
Polr1e-201ENSMUST00000029999 D430041D05RikF6ZGR6 1678 aa13.44□□□□□ -0.26
Polr1e-201ENSMUST00000029999 Nwd1A6H603 1563 aa13.43□□□□□ -0.26
Polr1e-201ENSMUST00000029999 Utp14aQ640M1 767 aaKnown RBP13.43□□□□□ -0.26
Polr1e-201ENSMUST00000029999 Amigo3Q8C2S7 508 aa13.43□□□□□ -0.26
Polr1e-201ENSMUST00000029999 Ppargc1bQ8VHJ7 1014 aa13.43□□□□□ -0.26
Polr1e-201ENSMUST00000029999 Tmem94Q7TSH8 1360 aa13.42□□□□□ -0.26
Polr1e-201ENSMUST00000029999 C3P01027 1663 aa13.41□□□□□ -0.26
Polr1e-201ENSMUST00000029999 Dapk1Q80YE7 1442 aa13.41□□□□□ -0.26
Polr1e-201ENSMUST00000029999 Pik3c2bE9QAN8 1632 aa13.4□□□□□ -0.26
Polr1e-201ENSMUST00000029999 Plekhg1F6S200 1446 aa13.4□□□□□ -0.26
Polr1e-201ENSMUST00000029999 Evi5lH3BKQ3 813 aa13.39□□□□□ -0.27
Polr1e-201ENSMUST00000029999 Nphp4P59240 1425 aa13.39□□□□□ -0.27
Polr1e-201ENSMUST00000029999 C5P06684 1680 aa13.38□□□□□ -0.27
Polr1e-201ENSMUST00000029999 Usp40Q8BWR4 1235 aa13.38□□□□□ -0.27
Polr1e-201ENSMUST00000029999 Slain2Q8CI08 581 aa13.38□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 253 ms