RNA–Protein interactions for RNA: ENSMUST00000029999.14

Polr1e-201, Transcript of DNA-directed RNA polymerase I subunit RPA49, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Polr1e, Length 1,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1e-201ENSMUST00000029999 Gm35339A0A140LHH9 1649 aa21.23■□□□□ 0.99
Polr1e-201ENSMUST00000029999 NischQ80TM9 1593 aa20.97■□□□□ 0.95
Polr1e-201ENSMUST00000029999 Abcc9P70170 1546 aa20.34■□□□□ 0.85
Polr1e-201ENSMUST00000029999 Abcc8B2RUS7 1588 aa20.22■□□□□ 0.83
Polr1e-201ENSMUST00000029999 ScribQ80U72 1612 aa19.48■□□□□ 0.71
Polr1e-201ENSMUST00000029999 Kdm5dQ62240 1548 aa18.84■□□□□ 0.61
Polr1e-201ENSMUST00000029999 NacadQ5SWP3 1504 aa18.78■□□□□ 0.6
Polr1e-201ENSMUST00000029999 Dcaf1Q80TR8 1506 aa18.62■□□□□ 0.57
Polr1e-201ENSMUST00000029999 Sycp2Q9CUU3 1500 aa18.42■□□□□ 0.54
Polr1e-201ENSMUST00000029999 Rb1cc1Q9ESK9 1588 aa18.33■□□□□ 0.52
Polr1e-201ENSMUST00000029999 Rhox8Q6VSS7 320 aa18.2■□□□□ 0.5
Polr1e-201ENSMUST00000029999 BicraF8VPZ9 1578 aa18.2■□□□□ 0.5
Polr1e-201ENSMUST00000029999 Ccdc180J3QNE4 1664 aa18.08■□□□□ 0.48
Polr1e-201ENSMUST00000029999 Baz1aO88379 1555 aa18.05■□□□□ 0.48
Polr1e-201ENSMUST00000029999 Crybg2B7ZCC2 1516 aa17.87■□□□□ 0.45
Polr1e-201ENSMUST00000029999 Zcchc6Q5BLK4 1491 aaKnown RBP17.75■□□□□ 0.43
Polr1e-201ENSMUST00000029999 Smarca2Q6DIC0 1577 aa17.56■□□□□ 0.4
Polr1e-201ENSMUST00000029999 Pds5bQ4VA53 1446 aaKnown RBP17.55■□□□□ 0.4
Polr1e-201ENSMUST00000029999 Rtl1Q7M732 1744 aa17.49■□□□□ 0.39
Polr1e-201ENSMUST00000029999 Thoc2B1AZI6 1594 aaKnown RBP17.44■□□□□ 0.38
Polr1e-201ENSMUST00000029999 Atad2bE9Q166 1460 aaKnown RBP17.44■□□□□ 0.38
Polr1e-201ENSMUST00000029999 Cecr2E9Q2Z1 1453 aa17.42■□□□□ 0.38
Polr1e-201ENSMUST00000029999 Smarca4Q3TKT4 1613 aaKnown RBP17.42■□□□□ 0.38
Polr1e-201ENSMUST00000029999 Dnajc5bQ9CQ94 199 aa17.39■□□□□ 0.37
Polr1e-201ENSMUST00000029999 Iqgap2Q3UQ44 1575 aa17.31■□□□□ 0.36
Polr1e-201ENSMUST00000029999 Ercc6F8VPZ5 1481 aa17.23■□□□□ 0.35
Polr1e-201ENSMUST00000029999 Cc2d2aQ8CFW7 1633 aa17.16■□□□□ 0.34
Polr1e-201ENSMUST00000029999 Wdr62Q3U3T8 1523 aa17.13■□□□□ 0.33
Polr1e-201ENSMUST00000029999 Frmpd1A2AKB4 1549 aa17.08■□□□□ 0.32
Polr1e-201ENSMUST00000029999 Synj1Q8CHC4 1574 aa17.06■□□□□ 0.32
Polr1e-201ENSMUST00000029999 Cttnbp2B9EJA2 1648 aa17.06■□□□□ 0.32
Polr1e-201ENSMUST00000029999 Fam135aQ6NS59 1506 aa17.06■□□□□ 0.32
Polr1e-201ENSMUST00000029999 CftrP26361 1476 aa17.03■□□□□ 0.32
Polr1e-201ENSMUST00000029999 Ccdc136Q3TVA9 1136 aa17.01■□□□□ 0.31
Polr1e-201ENSMUST00000029999 Brd4Q9ESU6 1400 aaKnown RBP16.99■□□□□ 0.31
Polr1e-201ENSMUST00000029999 Unc13aQ4KUS2 1712 aa16.98■□□□□ 0.31
Polr1e-201ENSMUST00000029999 Phldb1Q6PDH0 1371 aaKnown RBP16.88■□□□□ 0.29
Polr1e-201ENSMUST00000029999 Baz1bQ9Z277 1479 aa16.76■□□□□ 0.27
Polr1e-201ENSMUST00000029999 Trim41Q5NCC3 630 aa16.69■□□□□ 0.26
Polr1e-201ENSMUST00000029999 Ubl4bQ9CQ84 188 aa16.69■□□□□ 0.26
Polr1e-201ENSMUST00000029999 Esf1Q3V1V3 845 aaKnown RBP16.66■□□□□ 0.26
Polr1e-201ENSMUST00000029999 Mrc2Q64449 1479 aa16.62■□□□□ 0.25
Polr1e-201ENSMUST00000029999 Rsf1E9PWW9 1441 aaKnown RBP16.52■□□□□ 0.24
Polr1e-201ENSMUST00000029999 Top2bQ64511 1612 aa16.51■□□□□ 0.23
Polr1e-201ENSMUST00000029999 Lamc3Q9R0B6 1581 aa16.51■□□□□ 0.23
Polr1e-201ENSMUST00000029999 Kif15Q6P9L6 1387 aa16.49■□□□□ 0.23
Polr1e-201ENSMUST00000029999 Golga3P55937 1487 aa16.48■□□□□ 0.23
Polr1e-201ENSMUST00000029999 Cux2P70298 1426 aa16.45■□□□□ 0.22
Polr1e-201ENSMUST00000029999 TnnQ80Z71 1560 aa16.41■□□□□ 0.22
Polr1e-201ENSMUST00000029999 Kif21aQ9QXL2 1672 aa16.39■□□□□ 0.21
Polr1e-201ENSMUST00000029999 Cngb1E1AZ71 1325 aa16.39■□□□□ 0.21
Polr1e-201ENSMUST00000029999 Lrriq1Q0P5X1 1673 aa16.33■□□□□ 0.2
Polr1e-201ENSMUST00000029999 Fmn1Q05860 1466 aa16.27■□□□□ 0.19
Polr1e-201ENSMUST00000029999 Camsap1A2AHC3 1581 aa16.26■□□□□ 0.19
Polr1e-201ENSMUST00000029999 Cep164Q5DU05 1446 aa16.22■□□□□ 0.19
Polr1e-201ENSMUST00000029999 Ccdc18Q640L5 1455 aa16.22■□□□□ 0.19
Polr1e-201ENSMUST00000029999 Npm1Q61937 292 aaKnown RBP16.21■□□□□ 0.19
Polr1e-201ENSMUST00000029999 Il27Q8K3I6 234 aa16.16■□□□□ 0.18
Polr1e-201ENSMUST00000029999 Ccdc88bQ4QRL3 1481 aa16.12■□□□□ 0.17
Polr1e-201ENSMUST00000029999 Dhx29Q6PGC1 1365 aaKnown RBP16.11■□□□□ 0.17
Polr1e-201ENSMUST00000029999 Crocc2F6XLV1 1638 aa16.1■□□□□ 0.17
Polr1e-201ENSMUST00000029999 LrpprcQ6PB66 1392 aaKnown RBP16.1■□□□□ 0.17
Polr1e-201ENSMUST00000029999 Urb2E9Q7L1 1524 aaKnown RBP16.08■□□□□ 0.16
Polr1e-201ENSMUST00000029999 Eif4g3Q80XI3 1579 aaKnown RBP16.08■□□□□ 0.16
Polr1e-201ENSMUST00000029999 Plb1Q3TTY0 1478 aa16.04■□□□□ 0.16
Polr1e-201ENSMUST00000029999 PogzQ8BZH4 1409 aaKnown RBP16.04■□□□□ 0.16
Polr1e-201ENSMUST00000029999 Top2aQ01320 1528 aaKnown RBP16.03■□□□□ 0.16
Polr1e-201ENSMUST00000029999 Grin2bQ01097 1482 aa16.02■□□□□ 0.15
Polr1e-201ENSMUST00000029999 Duox2A2AQ99 1517 aa15.97■□□□□ 0.15
Polr1e-201ENSMUST00000029999 Chic1Q8CBW7 227 aa15.97■□□□□ 0.15
Polr1e-201ENSMUST00000029999 Samd9lQ69Z37 1561 aa15.94■□□□□ 0.14
Polr1e-201ENSMUST00000029999 Ift140E9PY46 1464 aa15.89■□□□□ 0.13
Polr1e-201ENSMUST00000029999 Rusc2Q80U22 1514 aa15.87■□□□□ 0.13
Polr1e-201ENSMUST00000029999 Setd1bQ8CFT2 1985 aa15.87■□□□□ 0.13
Polr1e-201ENSMUST00000029999 NrkQ9R0G8 1455 aa15.85■□□□□ 0.13
Polr1e-201ENSMUST00000029999 Efcab5A0JP43 1406 aa15.84■□□□□ 0.13
Polr1e-201ENSMUST00000029999 Disp1Q3TDN0 1521 aa15.82■□□□□ 0.12
Polr1e-201ENSMUST00000029999 PtprkP35822 1457 aa15.82■□□□□ 0.12
Polr1e-201ENSMUST00000029999 Pbrm1Q8BSQ9 1634 aaKnown RBP15.81■□□□□ 0.12
Polr1e-201ENSMUST00000029999 Shroom4Q1W617 1475 aa15.81■□□□□ 0.12
Polr1e-201ENSMUST00000029999 Rad54l2Q99NG0 1466 aa15.77■□□□□ 0.11
Polr1e-201ENSMUST00000029999 Nup160Q9Z0W3 1402 aaKnown RBP15.75■□□□□ 0.11
Polr1e-201ENSMUST00000029999 Magi3Q9EQJ9 1476 aa15.74■□□□□ 0.11
Polr1e-201ENSMUST00000029999 Grin2aP35436 1464 aa15.72■□□□□ 0.11
Polr1e-201ENSMUST00000029999 Shroom2A2ALU4 1481 aa15.72■□□□□ 0.11
Polr1e-201ENSMUST00000029999 SynmQ70IV5 1561 aa15.71■□□□□ 0.11
Polr1e-201ENSMUST00000029999 HrcG5E8J6 738 aa15.71■□□□□ 0.1
Polr1e-201ENSMUST00000029999 Cc2d2bA0A286YDU8 1405 aa15.67■□□□□ 0.1
Polr1e-201ENSMUST00000029999 Pla2r1Q62028 1487 aa15.67■□□□□ 0.1
Polr1e-201ENSMUST00000029999 Gpatch8A2A6A1 1505 aa15.67■□□□□ 0.1
Polr1e-201ENSMUST00000029999 AqrQ8CFQ3 1481 aaKnown RBP15.63■□□□□ 0.09
Polr1e-201ENSMUST00000029999 Rapgef2Q8CHG7 1496 aa15.6■□□□□ 0.09
Polr1e-201ENSMUST00000029999 Mroh2bQ7M6Y6 1581 aa15.6■□□□□ 0.09
Polr1e-201ENSMUST00000029999 Gab3Q8BSM5 595 aa15.6■□□□□ 0.09
Polr1e-201ENSMUST00000029999 Zeb1Q64318 1117 aa15.59■□□□□ 0.09
Polr1e-201ENSMUST00000029999 Npm2Q80W85 207 aa15.58■□□□□ 0.08
Polr1e-201ENSMUST00000029999 Eif4g1Q6NZJ6 1600 aaKnown RBP15.55■□□□□ 0.08
Polr1e-201ENSMUST00000029999 Abca16E9PWJ7 1678 aa15.53■□□□□ 0.08
Polr1e-201ENSMUST00000029999 Arhgap35Q91YM2 1499 aa15.53■□□□□ 0.08
Polr1e-201ENSMUST00000029999 WizO88286 1684 aaKnown RBP15.52■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 147 ms