RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 4933402E13RikQ9D4D2 429 aa15.77■□□□□ 0.12
Msh6-201ENSMUST00000005503 Mink1Q9JM52 1308 aa15.77■□□□□ 0.11
Msh6-201ENSMUST00000005503 Ddrgk1Q80WW9 315 aa15.77■□□□□ 0.11
Msh6-201ENSMUST00000005503 Il16O54824 1322 aa15.76■□□□□ 0.11
Msh6-201ENSMUST00000005503 Utp14aQ640M1 767 aaKnown RBP15.76■□□□□ 0.11
Msh6-201ENSMUST00000005503 Smc5Q8CG46 1101 aaKnown RBP15.75■□□□□ 0.11
Msh6-201ENSMUST00000005503 Atl3Q91YH5 541 aa15.75■□□□□ 0.11
Msh6-201ENSMUST00000005503 MccE9PWI3 1003 aa15.75■□□□□ 0.11
Msh6-201ENSMUST00000005503 VgfQ0VGU4 617 aa15.74■□□□□ 0.11
Msh6-201ENSMUST00000005503 Atxn3Q9CVD2 355 aa15.74■□□□□ 0.11
Msh6-201ENSMUST00000005503 Mug1P28665 1476 aa15.73■□□□□ 0.11
Msh6-201ENSMUST00000005503 CenpjQ569L8 1344 aa15.73■□□□□ 0.11
Msh6-201ENSMUST00000005503 Puf60Q3UEB3 564 aaKnown RBP15.73■□□□□ 0.11
Msh6-201ENSMUST00000005503 Safb2Q80YR5 991 aaKnown RBP15.73■□□□□ 0.11
Msh6-201ENSMUST00000005503 Lamc3Q9R0B6 1581 aa15.73■□□□□ 0.11
Msh6-201ENSMUST00000005503 Wdr62Q3U3T8 1523 aa15.73■□□□□ 0.11
Msh6-201ENSMUST00000005503 Triml2E9PW10 424 aa15.72■□□□□ 0.11
Msh6-201ENSMUST00000005503 Gpatch11Q3UFS4 262 aa15.72■□□□□ 0.11
Msh6-201ENSMUST00000005503 Nek4Q9Z1J2 792 aa15.72■□□□□ 0.11
Msh6-201ENSMUST00000005503 Sptbn5F6UCX4 1208 aa15.72■□□□□ 0.11
Msh6-201ENSMUST00000005503 Eif4g2Q62448 906 aaKnown RBP15.72■□□□□ 0.11
Msh6-201ENSMUST00000005503 Rtf1A2AQ19 715 aaKnown RBP15.72■□□□□ 0.11
Msh6-201ENSMUST00000005503 Casq1O09165 405 aa15.72■□□□□ 0.11
Msh6-201ENSMUST00000005503 Ssh1Q76I79 1042 aa15.71■□□□□ 0.11
Msh6-201ENSMUST00000005503 Q3TQI7 289 aaKnown RBP15.71■□□□□ 0.11
Msh6-201ENSMUST00000005503 Rbm25B2RY56 838 aaKnown RBP15.71■□□□□ 0.11
Msh6-201ENSMUST00000005503 MsnP26041 577 aaKnown RBP15.71■□□□□ 0.11
Msh6-201ENSMUST00000005503 CgnP59242 1191 aa15.71■□□□□ 0.11
Msh6-201ENSMUST00000005503 Cog6Q8R3I3 657 aa15.71■□□□□ 0.1
Msh6-201ENSMUST00000005503 Urb2E9Q7L1 1524 aaKnown RBP15.69■□□□□ 0.1
Msh6-201ENSMUST00000005503 Tnnt2P50752 301 aa15.69■□□□□ 0.1
Msh6-201ENSMUST00000005503 Sall3Q62255 1320 aa15.69■□□□□ 0.1
Msh6-201ENSMUST00000005503 Erbb3Q61526 1339 aa15.68■□□□□ 0.1
Msh6-201ENSMUST00000005503 ErbinQ80TH2 1402 aa15.68■□□□□ 0.1
Msh6-201ENSMUST00000005503 Shq1Q7TMX5 569 aa15.68■□□□□ 0.1
Msh6-201ENSMUST00000005503 PtmsQ9D0J8 101 aaKnown RBP15.68■□□□□ 0.1
Msh6-201ENSMUST00000005503 Camsap2Q8C1B1 1461 aa15.68■□□□□ 0.1
Msh6-201ENSMUST00000005503 Kdm5bQ80Y84 1544 aa15.67■□□□□ 0.1
Msh6-201ENSMUST00000005503 Dusp27Q148W8 1138 aa15.67■□□□□ 0.1
Msh6-201ENSMUST00000005503 Becn1O88597 448 aa15.67■□□□□ 0.1
Msh6-201ENSMUST00000005503 SkilQ60665 675 aa15.67■□□□□ 0.1
Msh6-201ENSMUST00000005503 Paxip1Q6NZQ4 1056 aa15.67■□□□□ 0.1
Msh6-201ENSMUST00000005503 Rnf214Q8BFU3 668 aaKnown RBP15.67■□□□□ 0.1
Msh6-201ENSMUST00000005503 Ush1cQ9ES64 910 aa15.67■□□□□ 0.1
Msh6-201ENSMUST00000005503 Pik3c2gO70167 1506 aa15.67■□□□□ 0.1
Msh6-201ENSMUST00000005503 SynmQ70IV5 1561 aa15.67■□□□□ 0.1
Msh6-201ENSMUST00000005503 Fam163aQ8CAA5 168 aa15.66■□□□□ 0.1
Msh6-201ENSMUST00000005503 Sox12Q04890 314 aa15.66■□□□□ 0.1
Msh6-201ENSMUST00000005503 Ppp1r9bQ6R891 817 aaKnown RBP15.66■□□□□ 0.1
Msh6-201ENSMUST00000005503 Kif18aQ91WD7 886 aa15.65■□□□□ 0.1
Msh6-201ENSMUST00000005503 Nol12Q8BG17 217 aa15.65■□□□□ 0.1
Msh6-201ENSMUST00000005503 Nsd2Q8BVE8 1365 aa15.65■□□□□ 0.1
Msh6-201ENSMUST00000005503 Q9D2X8 372 aa15.65■□□□□ 0.1
Msh6-201ENSMUST00000005503 Phactr2B1AVP0 632 aa15.65■□□□□ 0.1
Msh6-201ENSMUST00000005503 Usp16Q99LG0 825 aa15.64■□□□□ 0.09
Msh6-201ENSMUST00000005503 Rfx7F8VPJ6 1459 aa15.64■□□□□ 0.09
Msh6-201ENSMUST00000005503 Gpatch8A2A6A1 1505 aa15.63■□□□□ 0.09
Msh6-201ENSMUST00000005503 Brpf1B2RRD7 1212 aa15.63■□□□□ 0.09
Msh6-201ENSMUST00000005503 Nkx1-2P42580 305 aa15.63■□□□□ 0.09
Msh6-201ENSMUST00000005503 Cgnl1Q6AW69 1298 aa15.63■□□□□ 0.09
Msh6-201ENSMUST00000005503 Pes1Q9EQ61 584 aaKnown RBP15.62■□□□□ 0.09
Msh6-201ENSMUST00000005503 Ric3Q8BPM6 367 aa15.62■□□□□ 0.09
Msh6-201ENSMUST00000005503 Polr3aB2RXC6 1390 aa15.62■□□□□ 0.09
Msh6-201ENSMUST00000005503 Tfip11Q9ERA6 838 aaKnown RBP15.62■□□□□ 0.09
Msh6-201ENSMUST00000005503 Phf14Q9D4H9 881 aa15.61■□□□□ 0.09
Msh6-201ENSMUST00000005503 Thoc2B1AZI6 1594 aaKnown RBP15.61■□□□□ 0.09
Msh6-201ENSMUST00000005503 CrebrfQ8CDG5 640 aaKnown RBP15.61■□□□□ 0.09
Msh6-201ENSMUST00000005503 Rbm10Q99KG3 930 aaKnown RBP15.61■□□□□ 0.09
Msh6-201ENSMUST00000005503 Stk31Q99MW1 1018 aa15.61■□□□□ 0.09
Msh6-201ENSMUST00000005503 Asxl1P59598 1514 aa15.6■□□□□ 0.09
Msh6-201ENSMUST00000005503 Gtf2a1Q99PM3 378 aa15.6■□□□□ 0.09
Msh6-201ENSMUST00000005503 Filip1lQ6P6L0 1131 aa15.6■□□□□ 0.09
Msh6-201ENSMUST00000005503 PogkQ80TC5 607 aa15.6■□□□□ 0.09
Msh6-201ENSMUST00000005503 Swt1Q9DBQ9 907 aa15.6■□□□□ 0.09
Msh6-201ENSMUST00000005503 Ncoa3O09000 1398 aa15.6■□□□□ 0.09
Msh6-201ENSMUST00000005503 BC005561E9Q5E2 1589 aa15.6■□□□□ 0.09
Msh6-201ENSMUST00000005503 TnnQ80Z71 1560 aa15.6■□□□□ 0.09
Msh6-201ENSMUST00000005503 Prdm16A2A935 1275 aa15.6■□□□□ 0.09
Msh6-201ENSMUST00000005503 Plb1Q3TTY0 1478 aa15.59■□□□□ 0.09
Msh6-201ENSMUST00000005503 Mcm4P49717 862 aa15.59■□□□□ 0.09
Msh6-201ENSMUST00000005503 Rassf8Q8CJ96 419 aa15.59■□□□□ 0.09
Msh6-201ENSMUST00000005503 Rrp9Q91WM3 475 aaKnown RBP15.59■□□□□ 0.09
Msh6-201ENSMUST00000005503 Arhgap5P97393 1501 aa15.59■□□□□ 0.09
Msh6-201ENSMUST00000005503 Txndc2Q6P902 515 aa15.59■□□□□ 0.09
Msh6-201ENSMUST00000005503 Maco1Q7TQE6 664 aaKnown RBP15.59■□□□□ 0.09
Msh6-201ENSMUST00000005503 Sh3bp5Q9Z131 463 aa15.58■□□□□ 0.09
Msh6-201ENSMUST00000005503 Samd1D3YXK1 519 aa15.58■□□□□ 0.08
Msh6-201ENSMUST00000005503 AampJ3QN89 436 aa15.58■□□□□ 0.08
Msh6-201ENSMUST00000005503 Kiaa0754Q69ZZ9 979 aa15.58■□□□□ 0.08
Msh6-201ENSMUST00000005503 St18Q80TY4 1045 aa15.57■□□□□ 0.08
Msh6-201ENSMUST00000005503 Iffo2Q8R2V2 512 aa15.57■□□□□ 0.08
Msh6-201ENSMUST00000005503 Cavin4A2AMM0 362 aa15.57■□□□□ 0.08
Msh6-201ENSMUST00000005503 Slc4a10Q5DTL9 1118 aa15.57■□□□□ 0.08
Msh6-201ENSMUST00000005503 Crocc2F6XLV1 1638 aa15.56■□□□□ 0.08
Msh6-201ENSMUST00000005503 MecomP14404 1042 aa15.56■□□□□ 0.08
Msh6-201ENSMUST00000005503 Psme1P97371 249 aa15.56■□□□□ 0.08
Msh6-201ENSMUST00000005503 Cald1E9QA15 768 aaKnown RBP15.56■□□□□ 0.08
Msh6-201ENSMUST00000005503 Cetn4Q8K4K1 168 aa15.56■□□□□ 0.08
Msh6-201ENSMUST00000005503 Adam1bQ8R534 806 aa15.55■□□□□ 0.08
Msh6-201ENSMUST00000005503 Gripap1Q8VD04 806 aa15.55■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms