RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W RPA43P46669 326 aa8.23□□□□□ -1.09
MSF1YPR047W ARO8P53090 500 aaKnown RBP8.23□□□□□ -1.09
MSF1YPR047W COX18P53239 316 aa8.23□□□□□ -1.09
MSF1YPR047W CPR8P53728 308 aa8.23□□□□□ -1.09
MSF1YPR047W ALG6Q12001 544 aaKnown RBP8.23□□□□□ -1.09
MSF1YPR047W CHO1P08456 276 aa8.22□□□□□ -1.09
MSF1YPR047W ELO2P25358 347 aa8.22□□□□□ -1.09
MSF1YPR047W INO2P26798 304 aa8.22□□□□□ -1.09
MSF1YPR047W REC104P33323 182 aa8.22□□□□□ -1.09
MSF1YPR047W RPB7P34087 171 aa8.22□□□□□ -1.09
MSF1YPR047W SSO2P39926 295 aa8.22□□□□□ -1.09
MSF1YPR047W DIE2P50076 525 aa8.22□□□□□ -1.09
MSF1YPR047W CWC23P52868 283 aaPredicted RBP8.22□□□□□ -1.09
MSF1YPR047W SLX9P53251 210 aaPredicted RBP8.22□□□□□ -1.09
MSF1YPR047W MRPL35Q06678 367 aa8.22□□□□□ -1.09
MSF1YPR047W YOS1Q3E834 85 aa8.22□□□□□ -1.09
MSF1YPR047W AAC1P04710 309 aa8.21□□□□□ -1.09
MSF1YPR047W CDC34P14682 295 aa8.21□□□□□ -1.09
MSF1YPR047W FUS3P16892 353 aaKnown RBP8.21□□□□□ -1.09
MSF1YPR047W UTP30P36144 274 aaKnown RBP8.21□□□□□ -1.09
MSF1YPR047W ATG18P43601 500 aa8.21□□□□□ -1.09
MSF1YPR047W ORM1P53224 222 aa8.21□□□□□ -1.09
MSF1YPR047W DPB4Q04603 196 aaKnown RBP8.21□□□□□ -1.09
MSF1YPR047W YDR286CQ05530 114 aa8.21□□□□□ -1.09
MSF1YPR047W MSN1P22148 382 aa8.2□□□□□ -1.1
MSF1YPR047W LSB5P25369 354 aa8.2□□□□□ -1.1
MSF1YPR047W RPD3P32561 433 aa8.2□□□□□ -1.1
MSF1YPR047W SPS18P32572 300 aa8.2□□□□□ -1.1
MSF1YPR047W PRS4P38063 326 aaPredicted RBP8.2□□□□□ -1.1
MSF1YPR047W BMT5P40493 336 aa8.2□□□□□ -1.1
MSF1YPR047W YJR011CP47086 261 aaPredicted RBP8.2□□□□□ -1.1
MSF1YPR047W YGR042WP53227 271 aa8.2□□□□□ -1.1
MSF1YPR047W MRPL13Q02204 264 aa8.2□□□□□ -1.1
MSF1YPR047W SWT1Q12104 458 aa8.2□□□□□ -1.1
MSF1YPR047W LAS17Q12446 633 aa8.2□□□□□ -1.1
MSF1YPR047W MRPL23Q12487 163 aaPredicted RBP8.2□□□□□ -1.1
MSF1YPR047W MDN1Q12019 4910 aaKnown RBP8.2□□□□□ -1.1
MSF1YPR047W PET54P10834 293 aa8.2□□□□□ -1.1
MSF1YPR047W RNA14P25298 677 aaKnown RBP8.2□□□□□ -1.1
MSF1YPR047W YBR197CP38306 217 aa8.2□□□□□ -1.1
MSF1YPR047W IKI1P38874 309 aa8.2□□□□□ -1.1
MSF1YPR047W SIT1P39980 628 aa8.2□□□□□ -1.1
MSF1YPR047W YDL086WQ07505 273 aa8.2□□□□□ -1.1
MSF1YPR047W URA3P03962 267 aa8.19□□□□□ -1.1
MSF1YPR047W SPT14P32363 452 aa8.19□□□□□ -1.1
MSF1YPR047W MRP20P32387 263 aa8.19□□□□□ -1.1
MSF1YPR047W YHK8P38776 514 aa8.19□□□□□ -1.1
MSF1YPR047W OTU1P43558 301 aa8.19□□□□□ -1.1
MSF1YPR047W WWM1P43582 211 aaKnown RBP8.19□□□□□ -1.1
MSF1YPR047W VPS55P47111 140 aa8.19□□□□□ -1.1
MSF1YPR047W RPL9BP51401 191 aaKnown RBP8.19□□□□□ -1.1
MSF1YPR047W CWC25P53854 179 aaKnown RBP8.19□□□□□ -1.1
MSF1YPR047W LPP1Q04396 274 aa8.19□□□□□ -1.1
MSF1YPR047W HOR7Q05827 59 aa8.19□□□□□ -1.1
MSF1YPR047W INP53Q12271 1107 aa8.19□□□□□ -1.1
MSF1YPR047W YLR122CQ12312 125 aa8.19□□□□□ -1.1
MSF1YPR047W YLR365WQ7LIF2 110 aa8.19□□□□□ -1.1
MSF1YPR047W HOM6P31116 359 aaKnown RBP8.18□□□□□ -1.1
MSF1YPR047W MSS1P32559 526 aaPredicted RBP8.18□□□□□ -1.1
MSF1YPR047W YUH1P35127 236 aa8.18□□□□□ -1.1
MSF1YPR047W MSE1P48525 536 aa8.18□□□□□ -1.1
MSF1YPR047W YOR292CQ08743 309 aa8.18□□□□□ -1.1
MSF1YPR047W OLE1P21147 510 aaKnown RBP8.17□□□□□ -1.1
MSF1YPR047W YKL075CP36083 450 aa8.17□□□□□ -1.1
MSF1YPR047W MBA1P38300 278 aa8.17□□□□□ -1.1
MSF1YPR047W IPI1P38803 334 aaPredicted RBP8.17□□□□□ -1.1
MSF1YPR047W PCL7P40186 285 aa8.17□□□□□ -1.1
MSF1YPR047W MCH1Q07376 486 aa8.17□□□□□ -1.1
MSF1YPR047W YLR125WQ12138 136 aa8.17□□□□□ -1.1
MSF1YPR047W SUS1Q6WNK7 96 aa8.17□□□□□ -1.1
MSF1YPR047W CAP2P13517 287 aa8.16□□□□□ -1.1
MSF1YPR047W HTD2P38790 280 aaKnown RBP8.16□□□□□ -1.1
MSF1YPR047W PHM8P40025 321 aa8.16□□□□□ -1.1
MSF1YPR047W YJL213WP40896 331 aa8.16□□□□□ -1.1
MSF1YPR047W SER2P42941 309 aa8.16□□□□□ -1.1
MSF1YPR047W ALG9P53868 555 aaKnown RBP8.16□□□□□ -1.1
MSF1YPR047W TSA2Q04120 196 aa8.16□□□□□ -1.1
MSF1YPR047W ASM4Q05166 528 aa8.16□□□□□ -1.1
MSF1YPR047W SCM3Q12334 223 aa8.16□□□□□ -1.1
MSF1YPR047W YPR108W-AQ3E7B3 70 aa8.16□□□□□ -1.1
MSF1YPR047W GAL1P04385 528 aa8.15□□□□□ -1.1
MSF1YPR047W FLO10P36170 1169 aa8.15□□□□□ -1.1
MSF1YPR047W MRPL22P53881 309 aa8.15□□□□□ -1.1
MSF1YPR047W KEI1Q06346 221 aa8.15□□□□□ -1.1
MSF1YPR047W AEP3Q12089 606 aa8.15□□□□□ -1.1
MSF1YPR047W RPL9AP05738 191 aaKnown RBP8.14□□□□□ -1.11
MSF1YPR047W RPS8AP0CX39 200 aaKnown RBP8.14□□□□□ -1.11
MSF1YPR047W RPS8BP0CX40 200 aaKnown RBP8.14□□□□□ -1.11
MSF1YPR047W YHR212W-AP0CX91 67 aa8.14□□□□□ -1.11
MSF1YPR047W CKA1P15790 372 aa8.14□□□□□ -1.11
MSF1YPR047W SEN2P16658 377 aa8.14□□□□□ -1.11
MSF1YPR047W SRY1P36007 326 aa8.14□□□□□ -1.11
MSF1YPR047W SYG1P40528 902 aa8.14□□□□□ -1.11
MSF1YPR047W MED4Q12343 284 aa8.14□□□□□ -1.11
MSF1YPR047W RPL3P14126 387 aaKnown RBP8.13□□□□□ -1.11
MSF1YPR047W STF2P16965 84 aa8.13□□□□□ -1.11
MSF1YPR047W ROX3P25046 220 aa8.13□□□□□ -1.11
MSF1YPR047W ERV29P53337 310 aa8.13□□□□□ -1.11
MSF1YPR047W YLR031WQ07978 186 aa8.13□□□□□ -1.11
MSF1YPR047W GPP2P40106 250 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms