RNA–Protein interactions for RNA: YPR013C

CMR3, Transcript of Putative zinc finger protein, yeast

Gene CMR3, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR3	YPR013C	ECM11	Q04110	302 aa		3.25	□□□□□ -1.89
CMR3	YPR013C	YMR315W	Q04869	349 aa	Known RBP	3.25	□□□□□ -1.89
CMR3	YPR013C	FCF1	Q05498	189 aa	Predicted RBP	3.25	□□□□□ -1.89
CMR3	YPR013C	YPR063C	Q12160	140 aa		3.25	□□□□□ -1.89
CMR3	YPR013C	RAD10	P06838	210 aa		3.24	□□□□□ -1.89
CMR3	YPR013C	TKL2	P33315	681 aa		3.24	□□□□□ -1.89
CMR3	YPR013C	YKR041W	P36134	250 aa		3.24	□□□□□ -1.89
CMR3	YPR013C	MAK5	P38112	773 aa	Predicted RBP	3.24	□□□□□ -1.89
CMR3	YPR013C	RSM25	P40496	264 aa		3.24	□□□□□ -1.89
CMR3	YPR013C	PFS2	P42841	465 aa	Known RBP	3.24	□□□□□ -1.89
CMR3	YPR013C	OST2	P46964	130 aa		3.24	□□□□□ -1.89
CMR3	YPR013C	TMA22	P47089	198 aa	Predicted RBP	3.24	□□□□□ -1.89
CMR3	YPR013C	UBC12	P52491	188 aa		3.24	□□□□□ -1.89
CMR3	YPR013C	YNL010W	P53981	241 aa	Known RBP	3.24	□□□□□ -1.89
CMR3	YPR013C	YLR050C	Q12155	161 aa	Known RBP	3.24	□□□□□ -1.89
CMR3	YPR013C	SNF4	P12904	322 aa		3.23	□□□□□ -1.89
CMR3	YPR013C	GRX2	P17695	143 aa	Known RBP	3.23	□□□□□ -1.89
CMR3	YPR013C	ATG22	P25568	528 aa		3.23	□□□□□ -1.89
CMR3	YPR013C	MID2	P36027	376 aa		3.23	□□□□□ -1.89
CMR3	YPR013C	YER076C	P40049	302 aa		3.23	□□□□□ -1.89
CMR3	YPR013C	RSM10	Q03201	203 aa		3.23	□□□□□ -1.89
CMR3	YPR013C	GAS3	Q03655	524 aa		3.23	□□□□□ -1.89
CMR3	YPR013C	ATG39	Q06159	398 aa		3.23	□□□□□ -1.89
CMR3	YPR013C	YOR283W	Q12040	230 aa	Known RBP	3.23	□□□□□ -1.89
CMR3	YPR013C	HIS3	P06633	220 aa		3.22	□□□□□ -1.89
CMR3	YPR013C	CLG1	P35190	452 aa		3.22	□□□□□ -1.89
CMR3	YPR013C	SKG1	P36169	355 aa		3.22	□□□□□ -1.89
CMR3	YPR013C	FIG1	P38224	298 aa		3.22	□□□□□ -1.89
CMR3	YPR013C	POP4	P38336	279 aa		3.22	□□□□□ -1.89
CMR3	YPR013C	ARC15	P40518	154 aa	RIP-Chip data	3.22	□□□□□ -1.89	not detected
CMR3	YPR013C	YIR035C	P40579	254 aa		3.22	□□□□□ -1.89
CMR3	YPR013C	MBF1	O14467	151 aa	Known RBP	3.21	□□□□□ -1.9
CMR3	YPR013C	CNB1	P25296	175 aa		3.21	□□□□□ -1.9
CMR3	YPR013C	YHR125W	P38831	101 aa		3.21	□□□□□ -1.9
CMR3	YPR013C	GLE2	P40066	365 aa		3.21	□□□□□ -1.9
CMR3	YPR013C	LSM4	P40070	187 aa	Known RBP	3.21	□□□□□ -1.9
CMR3	YPR013C	FMP32	P43557	207 aa		3.21	□□□□□ -1.9
CMR3	YPR013C	BUD13	P46947	266 aa	Predicted RBP	3.21	□□□□□ -1.9
CMR3	YPR013C	GON7	P46984	123 aa		3.21	□□□□□ -1.9
CMR3	YPR013C	PEX12	Q04370	399 aa		3.21	□□□□□ -1.9
CMR3	YPR013C	BRX1	Q08235	291 aa	Known RBP	3.21	□□□□□ -1.9
CMR3	YPR013C	YPL162C	Q12042	273 aa		3.21	□□□□□ -1.9
CMR3	YPR013C	RIO1	Q12196	484 aa	Known RBP	3.21	□□□□□ -1.9
CMR3	YPR013C	Q0255	P03881	472 aa		3.2	□□□□□ -1.9
CMR3	YPR013C	RPS24A	P0CX31	135 aa	Known RBP	3.2	□□□□□ -1.9
CMR3	YPR013C	RPS24B	P0CX32	135 aa	Known RBP	3.2	□□□□□ -1.9
CMR3	YPR013C	NUP49	Q02199	472 aa		3.2	□□□□□ -1.9
CMR3	YPR013C	SUE1	Q06524	206 aa		3.2	□□□□□ -1.9
CMR3	YPR013C	PEX11	Q12462	236 aa		3.2	□□□□□ -1.9
CMR3	YPR013C	YLR156W	P0CE96	114 aa		3.19	□□□□□ -1.9
CMR3	YPR013C	YLR159W	P0CE97	114 aa		3.19	□□□□□ -1.9
CMR3	YPR013C	YLR161W	P0CE98	114 aa		3.19	□□□□□ -1.9
CMR3	YPR013C	DPM1	P14020	267 aa	Known RBP	3.19	□□□□□ -1.9
CMR3	YPR013C	AHC2	P25649	128 aa		3.19	□□□□□ -1.9
CMR3	YPR013C	YCR090C	P25654	182 aa	Known RBP	3.19	□□□□□ -1.9
CMR3	YPR013C	ARO7	P32178	256 aa		3.19	□□□□□ -1.9
CMR3	YPR013C	SEC17	P32602	292 aa		3.19	□□□□□ -1.9
CMR3	YPR013C	YOX1	P34161	385 aa		3.19	□□□□□ -1.9
CMR3	YPR013C	UTP30	P36144	274 aa	Known RBP	3.19	□□□□□ -1.9
CMR3	YPR013C	NVJ1	P38881	321 aa		3.19	□□□□□ -1.9
CMR3	YPR013C	YIL059C	P40520	121 aa		3.19	□□□□□ -1.9
CMR3	YPR013C	YGL235W	P53071	178 aa		3.19	□□□□□ -1.9
CMR3	YPR013C	AIM34	Q03673	198 aa		3.19	□□□□□ -1.9
CMR3	YPR013C	YLR053C	Q12026	108 aa		3.19	□□□□□ -1.9
CMR3	YPR013C	YFR032C-B	Q8TGU2	87 aa		3.19	□□□□□ -1.9
CMR3	YPR013C	RPL9A	P05738	191 aa	Known RBP	3.18	□□□□□ -1.9
CMR3	YPR013C	RPS28B	P0C0X0	67 aa	Known RBP	3.18	□□□□□ -1.9
CMR3	YPR013C	SEC14	P24280	304 aa	Known RBP	3.18	□□□□□ -1.9
CMR3	YPR013C	MEI4	P29467	408 aa		3.18	□□□□□ -1.9
CMR3	YPR013C	DER1	P38307	211 aa		3.18	□□□□□ -1.9
CMR3	YPR013C	YER188W	P40103	239 aa		3.18	□□□□□ -1.9
CMR3	YPR013C	RPL9B	P51401	191 aa	Known RBP	3.18	□□□□□ -1.9
CMR3	YPR013C	YGR026W	P53217	278 aa		3.18	□□□□□ -1.9
CMR3	YPR013C	YDR249C	Q03787	373 aa		3.18	□□□□□ -1.9
CMR3	YPR013C	RRP17	Q04031	235 aa	Predicted RBP	3.18	□□□□□ -1.9
CMR3	YPR013C	YOR268C	Q08734	132 aa		3.18	□□□□□ -1.9
CMR3	YPR013C	NSL1	Q12143	216 aa		3.18	□□□□□ -1.9
CMR3	YPR013C	PSF1	Q12488	208 aa		3.18	□□□□□ -1.9
CMR3	YPR013C	RPS28A	Q3E7X9	67 aa	Predicted RBP	3.18	□□□□□ -1.9
CMR3	YPR013C	SAS5	Q99314	248 aa		3.18	□□□□□ -1.9
CMR3	YPR013C	SOD1	P00445	154 aa	Known RBP	3.17	□□□□□ -1.9
CMR3	YPR013C	REP2	P03872	296 aa		3.17	□□□□□ -1.9
CMR3	YPR013C	CMD1	P06787	147 aa	Known RBP	3.17	□□□□□ -1.9
CMR3	YPR013C	BET1	P22804	142 aa		3.17	□□□□□ -1.9
CMR3	YPR013C	YFH7	P43591	353 aa		3.17	□□□□□ -1.9
CMR3	YPR013C	ARP3	P47117	449 aa	Known RBP	3.17	□□□□□ -1.9
CMR3	YPR013C	PLP1	Q04004	230 aa		3.17	□□□□□ -1.9
CMR3	YPR013C	HPT1	Q04178	221 aa	Known RBP	3.17	□□□□□ -1.9
CMR3	YPR013C	YLR031W	Q07978	186 aa		3.17	□□□□□ -1.9
CMR3	YPR013C	CDC8	P00572	216 aa		3.16	□□□□□ -1.9
CMR3	YPR013C	URA5	P13298	226 aa	Known RBP	3.16	□□□□□ -1.9
CMR3	YPR013C	RPB3	P16370	318 aa	Known RBP	3.16	□□□□□ -1.9
CMR3	YPR013C	PET9	P18239	318 aa	Known RBP	3.16	□□□□□ -1.9
CMR3	YPR013C	CKS1	P20486	150 aa	Known RBP	3.16	□□□□□ -1.9
CMR3	YPR013C	TIF34	P40217	347 aa	Known RBP	3.16	□□□□□ -1.9
CMR3	YPR013C	ARO8	P53090	500 aa	Known RBP	3.16	□□□□□ -1.9
CMR3	YPR013C	APJ1	P53940	528 aa		3.16	□□□□□ -1.9
CMR3	YPR013C	YDR114C	Q04597	100 aa		3.16	□□□□□ -1.9
CMR3	YPR013C	SHH4	Q06236	168 aa		3.16	□□□□□ -1.9
CMR3	YPR013C	MCP1	Q12106	302 aa		3.16	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms