RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C GIM3P53900 129 aa6.6□□□□□ -1.35
LSP1YPL004C TY1A-DR2Q03964 440 aaKnown RBP6.6□□□□□ -1.35
LSP1YPL004C YDR286CQ05530 114 aa6.6□□□□□ -1.35
LSP1YPL004C ALG6Q12001 544 aaKnown RBP6.6□□□□□ -1.35
LSP1YPL004C CDC23P16522 626 aa6.59□□□□□ -1.35
LSP1YPL004C PIC2P40035 300 aa6.59□□□□□ -1.35
LSP1YPL004C BNA1P47096 177 aa6.59□□□□□ -1.35
LSP1YPL004C RSM27P53305 110 aa6.59□□□□□ -1.35
LSP1YPL004C ALG9P53868 555 aaKnown RBP6.59□□□□□ -1.35
LSP1YPL004C MRPL22P53881 309 aa6.59□□□□□ -1.35
LSP1YPL004C YML018CQ03730 393 aa6.59□□□□□ -1.35
LSP1YPL004C ASM4Q05166 528 aa6.59□□□□□ -1.35
LSP1YPL004C SYM1Q06563 197 aa6.59□□□□□ -1.35
LSP1YPL004C YOL118CQ08259 102 aa6.59□□□□□ -1.35
LSP1YPL004C YPR108W-AQ3E7B3 70 aa6.59□□□□□ -1.35
LSP1YPL004C PET20Q99373 253 aa6.59□□□□□ -1.35
LSP1YPL004C CKA1P15790 372 aa6.58□□□□□ -1.36
LSP1YPL004C SEN2P16658 377 aa6.58□□□□□ -1.36
LSP1YPL004C MIR1P23641 311 aaKnown RBP6.58□□□□□ -1.36
LSP1YPL004C CBT1P36038 271 aaPredicted RBP6.58□□□□□ -1.36
LSP1YPL004C POP2P39008 433 aa6.58□□□□□ -1.36
LSP1YPL004C LSM1P47017 172 aaKnown RBP6.58□□□□□ -1.36
LSP1YPL004C YGL262WP53054 175 aa6.58□□□□□ -1.36
LSP1YPL004C ARO8P53090 500 aaKnown RBP6.58□□□□□ -1.36
LSP1YPL004C PEX10Q05568 337 aa6.58□□□□□ -1.36
LSP1YPL004C UBA3Q99344 299 aa6.58□□□□□ -1.36
LSP1YPL004C YCP4P25349 247 aaKnown RBP6.57□□□□□ -1.36
LSP1YPL004C SPS18P32572 300 aa6.57□□□□□ -1.36
LSP1YPL004C AIR1P40507 360 aaKnown RBP6.57□□□□□ -1.36
LSP1YPL004C YJL118WP47022 219 aa6.57□□□□□ -1.36
LSP1YPL004C YGR045CP53229 120 aa6.57□□□□□ -1.36
LSP1YPL004C SMX3P54999 86 aaPredicted RBP6.57□□□□□ -1.36
LSP1YPL004C DPB4Q04603 196 aaKnown RBP6.57□□□□□ -1.36
LSP1YPL004C YOR292CQ08743 309 aa6.57□□□□□ -1.36
LSP1YPL004C MED4Q12343 284 aa6.57□□□□□ -1.36
LSP1YPL004C YPR071WQ12346 211 aa6.57□□□□□ -1.36
LSP1YPL004C TFC7Q12415 435 aa6.57□□□□□ -1.36
LSP1YPL004C TRR1P29509 319 aaKnown RBP6.56□□□□□ -1.36
LSP1YPL004C MRP20P32387 263 aa6.56□□□□□ -1.36
LSP1YPL004C REC104P33323 182 aa6.56□□□□□ -1.36
LSP1YPL004C UTP30P36144 274 aaKnown RBP6.56□□□□□ -1.36
LSP1YPL004C YKE4P40544 346 aa6.56□□□□□ -1.36
LSP1YPL004C RPA34P47006 233 aaPredicted RBP6.56□□□□□ -1.36
LSP1YPL004C GTF1P53260 183 aaPredicted RBP6.56□□□□□ -1.36
LSP1YPL004C STD1Q02794 444 aa6.56□□□□□ -1.36
LSP1YPL004C NRG1Q03125 231 aa6.56□□□□□ -1.36
LSP1YPL004C MIX17Q03667 156 aa6.56□□□□□ -1.36
LSP1YPL004C SCP1Q08873 200 aa6.56□□□□□ -1.36
LSP1YPL004C SPS2P08459 502 aa6.55□□□□□ -1.36
LSP1YPL004C NHP6BP11633 99 aaKnown RBP6.55□□□□□ -1.36
LSP1YPL004C BGL2P15703 313 aaKnown RBP6.55□□□□□ -1.36
LSP1YPL004C VMA8P32610 256 aaKnown RBP6.55□□□□□ -1.36
LSP1YPL004C IKI1P38874 309 aa6.55□□□□□ -1.36
LSP1YPL004C YPL108WQ02872 168 aaPredicted RBP6.55□□□□□ -1.36
LSP1YPL004C YDR415CQ04033 374 aaPredicted RBP6.55□□□□□ -1.36
LSP1YPL004C TMA10Q06177 86 aa6.55□□□□□ -1.36
LSP1YPL004C ENV7Q12003 364 aa6.55□□□□□ -1.36
LSP1YPL004C DIT1P21623 536 aa6.54□□□□□ -1.36
LSP1YPL004C SUA7P29055 345 aaPredicted RBP6.54□□□□□ -1.36
LSP1YPL004C YDL086WQ07505 273 aa6.54□□□□□ -1.36
LSP1YPL004C YPD1Q07688 167 aa6.54□□□□□ -1.36
LSP1YPL004C SWT1Q12104 458 aa6.54□□□□□ -1.36
LSP1YPL004C RDI1Q12434 202 aa6.54□□□□□ -1.36
LSP1YPL004C HUG1Q6Q5K6 68 aa6.54□□□□□ -1.36
LSP1YPL004C DYN1P36022 4092 aa6.54□□□□□ -1.36
LSP1YPL004C RNA14P25298 677 aaKnown RBP6.53□□□□□ -1.36
LSP1YPL004C LSB5P25369 354 aa6.53□□□□□ -1.36
LSP1YPL004C YCR016WP25617 290 aaKnown RBP6.53□□□□□ -1.36
LSP1YPL004C PMU1P36069 295 aa6.53□□□□□ -1.36
LSP1YPL004C PAN3P36102 679 aaPredicted RBP6.53□□□□□ -1.36
LSP1YPL004C MRPL3P36516 390 aa6.53□□□□□ -1.36
LSP1YPL004C ECM31P38122 312 aa6.53□□□□□ -1.36
LSP1YPL004C POP8P38208 133 aa6.53□□□□□ -1.36
LSP1YPL004C SSO2P39926 295 aa6.53□□□□□ -1.36
LSP1YPL004C GPG1P53130 126 aa6.53□□□□□ -1.36
LSP1YPL004C DUG3P53871 357 aa6.53□□□□□ -1.36
LSP1YPL004C YMR166CQ03829 368 aa6.53□□□□□ -1.36
LSP1YPL004C VBA1Q04301 562 aa6.53□□□□□ -1.36
LSP1YPL004C RTT103Q05543 409 aa6.53□□□□□ -1.36
LSP1YPL004C MSA1Q08471 629 aa6.53□□□□□ -1.36
LSP1YPL004C ERG2P32352 222 aa6.52□□□□□ -1.37
LSP1YPL004C COQ2P32378 372 aa6.52□□□□□ -1.37
LSP1YPL004C YBR242WP38331 238 aa6.52□□□□□ -1.37
LSP1YPL004C LAG1P38703 411 aa6.52□□□□□ -1.37
LSP1YPL004C CWC25P53854 179 aaKnown RBP6.52□□□□□ -1.37
LSP1YPL004C MEH1Q02205 184 aa6.52□□□□□ -1.37
LSP1YPL004C MRPS16Q02608 121 aa6.52□□□□□ -1.37
LSP1YPL004C THI74Q04083 370 aa6.52□□□□□ -1.37
LSP1YPL004C TSA2Q04120 196 aa6.52□□□□□ -1.37
LSP1YPL004C SRL1Q08673 210 aa6.52□□□□□ -1.37
LSP1YPL004C ATO3Q12359 275 aa6.52□□□□□ -1.37
LSP1YPL004C ADE8P04161 214 aa6.51□□□□□ -1.37
LSP1YPL004C HEM13P11353 328 aaKnown RBP6.51□□□□□ -1.37
LSP1YPL004C YMR31P19955 123 aa6.51□□□□□ -1.37
LSP1YPL004C ROX3P25046 220 aa6.51□□□□□ -1.37
LSP1YPL004C DAL3P32459 195 aa6.51□□□□□ -1.37
LSP1YPL004C CUE1P38428 203 aa6.51□□□□□ -1.37
LSP1YPL004C PCL7P40186 285 aa6.51□□□□□ -1.37
LSP1YPL004C YJR056CP47115 236 aa6.51□□□□□ -1.37
LSP1YPL004C MSE1P48525 536 aa6.51□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 81.1 ms