RNA–Protein interactions for RNA: YOR322C

LDB19, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene LDB19, Length 2,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB19YOR322C HOM6P31116 359 aaKnown RBP5.28□□□□□ -1.56
LDB19YOR322C MUD1P32605 298 aaKnown RBP5.28□□□□□ -1.56
LDB19YOR322C EMC3P36039 253 aa5.28□□□□□ -1.56
LDB19YOR322C VRP1P37370 817 aa5.28□□□□□ -1.56
LDB19YOR322C YEL075CP39972 122 aa5.28□□□□□ -1.56
LDB19YOR322C SPC25P40014 221 aa5.28□□□□□ -1.56
LDB19YOR322C TIS11P47977 285 aa5.28□□□□□ -1.56
LDB19YOR322C VEL1P53058 206 aa5.28□□□□□ -1.56
LDB19YOR322C ERG13P54839 491 aaKnown RBP5.28□□□□□ -1.56
LDB19YOR322C YPL245WQ12179 454 aaKnown RBP5.28□□□□□ -1.56
LDB19YOR322C YNR034W-AQ3E841 98 aa5.28□□□□□ -1.56
LDB19YOR322C TIP1P27654 210 aaPredicted RBP5.27□□□□□ -1.57
LDB19YOR322C YKL107WP34251 309 aa5.27□□□□□ -1.57
LDB19YOR322C SHB17P36136 271 aaKnown RBP5.27□□□□□ -1.57
LDB19YOR322C YJL193WP39542 402 aa5.27□□□□□ -1.57
LDB19YOR322C YMR144WP40214 342 aaKnown RBP5.27□□□□□ -1.57
LDB19YOR322C SYS1P41544 203 aa5.27□□□□□ -1.57
LDB19YOR322C ATG18P43601 500 aa5.27□□□□□ -1.57
LDB19YOR322C FAR3P46671 204 aa5.27□□□□□ -1.57
LDB19YOR322C CTK2P46962 323 aa5.27□□□□□ -1.57
LDB19YOR322C AVT1P47082 602 aa5.27□□□□□ -1.57
LDB19YOR322C TOS2P50078 622 aa5.27□□□□□ -1.57
LDB19YOR322C YMR166CQ03829 368 aa5.27□□□□□ -1.57
LDB19YOR322C THI74Q04083 370 aa5.27□□□□□ -1.57
LDB19YOR322C RLM1Q12224 676 aa5.27□□□□□ -1.57
LDB19YOR322C YPL229WQ99395 206 aa5.27□□□□□ -1.57
LDB19YOR322C AMD1P15274 810 aaKnown RBP5.26□□□□□ -1.57
LDB19YOR322C YBR032WP38223 100 aa5.26□□□□□ -1.57
LDB19YOR322C YHL049CP38722 271 aa5.26□□□□□ -1.57
LDB19YOR322C LYS1P38998 373 aaRIP-Chip data5.26□□□□□ -1.57 RIP-Chip
LDB19YOR322C YER079WP40052 210 aaKnown RBP5.26□□□□□ -1.57
LDB19YOR322C GLE2P40066 365 aa5.26□□□□□ -1.57
LDB19YOR322C YIL059CP40520 121 aa5.26□□□□□ -1.57
LDB19YOR322C YNR040WP53736 256 aa5.26□□□□□ -1.57
LDB19YOR322C GPI15P53961 229 aa5.26□□□□□ -1.57
LDB19YOR322C KTR5P53966 522 aaPredicted RBP5.26□□□□□ -1.57
LDB19YOR322C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
LDB19YOR322C BET5Q03630 159 aa5.26□□□□□ -1.57
LDB19YOR322C SCW10Q04951 389 aa5.26□□□□□ -1.57
LDB19YOR322C PEX27Q08580 376 aa5.26□□□□□ -1.57
LDB19YOR322C PEX11Q12462 236 aa5.26□□□□□ -1.57
LDB19YOR322C Q0142Q9ZZW4 58 aa5.26□□□□□ -1.57
LDB19YOR322C AVT7P40501 490 aa5.26□□□□□ -1.57
LDB19YOR322C RPN11P43588 306 aaKnown RBP5.26□□□□□ -1.57
LDB19YOR322C YGR015CP53208 328 aa5.26□□□□□ -1.57
LDB19YOR322C THG1P53215 237 aaKnown RBP5.26□□□□□ -1.57
LDB19YOR322C COF1Q03048 143 aaKnown RBP5.26□□□□□ -1.57
LDB19YOR322C YPR015CQ12531 247 aa5.26□□□□□ -1.57
LDB19YOR322C BI2P03873 423 aa5.25□□□□□ -1.57
LDB19YOR322C ALG7P07286 448 aa5.25□□□□□ -1.57
LDB19YOR322C RPB8P20436 146 aa5.25□□□□□ -1.57
LDB19YOR322C PMI40P29952 429 aaKnown RBP5.25□□□□□ -1.57
LDB19YOR322C ASH1P34233 588 aa5.25□□□□□ -1.57
LDB19YOR322C TRR2P38816 342 aa5.25□□□□□ -1.57
LDB19YOR322C RPL13BP40212 199 aaKnown RBP5.25□□□□□ -1.57
LDB19YOR322C YIL024CP40543 189 aa5.25□□□□□ -1.57
LDB19YOR322C YFL040WP43562 540 aa5.25□□□□□ -1.57
LDB19YOR322C YGR039WP53225 103 aa5.25□□□□□ -1.57
LDB19YOR322C YIF1P53845 314 aaKnown RBP5.25□□□□□ -1.57
LDB19YOR322C YNL095CP53932 642 aa5.25□□□□□ -1.57
LDB19YOR322C HRI1Q05905 244 aaKnown RBP5.25□□□□□ -1.57
LDB19YOR322C YOR376WQ08900 122 aa5.25□□□□□ -1.57
LDB19YOR322C RPL7BQ12213 244 aaKnown RBP5.25□□□□□ -1.57
LDB19YOR322C YLR126CQ12288 251 aa5.25□□□□□ -1.57
LDB19YOR322C PAI3P01094 68 aa5.25□□□□□ -1.57
LDB19YOR322C YER190C-BP0CX94 160 aa5.25□□□□□ -1.57
LDB19YOR322C YEL077W-AP0CX95 160 aa5.25□□□□□ -1.57
LDB19YOR322C YGR296C-BP0CX96 160 aa5.25□□□□□ -1.57
LDB19YOR322C YPL283W-BP0CX97 160 aa5.25□□□□□ -1.57
LDB19YOR322C YPR204C-AP0CX98 160 aa5.25□□□□□ -1.57
LDB19YOR322C CDC43P18898 376 aa5.25□□□□□ -1.57
LDB19YOR322C LRE1P25579 583 aaKnown RBP5.25□□□□□ -1.57
LDB19YOR322C GLC7P32598 312 aaKnown RBP5.25□□□□□ -1.57
LDB19YOR322C YKL151CP36059 337 aa5.25□□□□□ -1.57
LDB19YOR322C PMU1P36069 295 aa5.25□□□□□ -1.57
LDB19YOR322C GEP4P38812 185 aa5.25□□□□□ -1.57
LDB19YOR322C ECM14P38836 430 aa5.25□□□□□ -1.57
LDB19YOR322C IPT1P38954 527 aa5.25□□□□□ -1.57
LDB19YOR322C YNL165WP53891 406 aa5.25□□□□□ -1.57
LDB19YOR322C YKR011CQ02209 353 aa5.25□□□□□ -1.57
LDB19YOR322C RAV2Q03956 351 aa5.25□□□□□ -1.57
LDB19YOR322C SWC7Q06707 132 aa5.25□□□□□ -1.57
LDB19YOR322C CRD1Q07560 283 aa5.25□□□□□ -1.57
LDB19YOR322C MRPL6P32904 214 aa5.24□□□□□ -1.57
LDB19YOR322C YBR090CP38253 122 aa5.24□□□□□ -1.57
LDB19YOR322C PEX22P39718 180 aa5.24□□□□□ -1.57
LDB19YOR322C YFL065CP43539 102 aa5.24□□□□□ -1.57
LDB19YOR322C BRR6P53062 197 aa5.24□□□□□ -1.57
LDB19YOR322C ARC18Q05933 178 aaKnown RBP5.24□□□□□ -1.57
LDB19YOR322C YOL024WQ08172 172 aa5.24□□□□□ -1.57
LDB19YOR322C YPR203WQ08994 102 aa5.24□□□□□ -1.57
LDB19YOR322C MLP1Q02455 1875 aaKnown RBP5.24□□□□□ -1.57
LDB19YOR322C TPK3P05986 398 aa5.24□□□□□ -1.57
LDB19YOR322C CPA1P07258 411 aaKnown RBP5.24□□□□□ -1.57
LDB19YOR322C RPS25BP0C0T4 108 aaKnown RBP5.24□□□□□ -1.57
LDB19YOR322C ANB1P19211 157 aa5.24□□□□□ -1.57
LDB19YOR322C GPX2P38143 162 aa5.24□□□□□ -1.57
LDB19YOR322C TEM1P38987 245 aa5.24□□□□□ -1.57
LDB19YOR322C PRE5P40302 234 aaKnown RBP5.24□□□□□ -1.57
LDB19YOR322C BUD8P41698 603 aa5.24□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms