RNA–Protein interactions for RNA: YNL049C

SFB2, Transcript of Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB2, Length 2,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB2YNL049C TIM9O74700 87 aa1.34□□□□□ -2.2
SFB2YNL049C TDH1P00360 332 aaKnown RBP1.34□□□□□ -2.2
SFB2YNL049C RAD7P06779 565 aa1.34□□□□□ -2.2
SFB2YNL049C MIR1P23641 311 aaKnown RBP1.34□□□□□ -2.2
SFB2YNL049C BUB2P26448 306 aaPredicted RBP1.34□□□□□ -2.2
SFB2YNL049C MIG1P27705 504 aa1.34□□□□□ -2.2
SFB2YNL049C ACB1P31787 87 aa1.34□□□□□ -2.2
SFB2YNL049C HYM1P32464 399 aa1.34□□□□□ -2.2
SFB2YNL049C AIM10P39965 576 aaKnown RBP1.34□□□□□ -2.2
SFB2YNL049C YNL208WP40159 199 aaKnown RBP1.34□□□□□ -2.2
SFB2YNL049C DFG10P40526 253 aa1.34□□□□□ -2.2
SFB2YNL049C RPA43P46669 326 aa1.34□□□□□ -2.2
SFB2YNL049C FMP33P46998 180 aa1.34□□□□□ -2.2
SFB2YNL049C IRC25Q07951 179 aa1.34□□□□□ -2.2
SFB2YNL049C ATP16Q12165 160 aa1.34□□□□□ -2.2
SFB2YNL049C JID1Q12350 301 aa1.34□□□□□ -2.2
SFB2YNL049C YPL247CQ12523 523 aa1.34□□□□□ -2.2
SFB2YNL049C MSW1P04803 379 aa1.33□□□□□ -2.2
SFB2YNL049C ZWF1P11412 505 aaKnown RBP1.33□□□□□ -2.2
SFB2YNL049C PET9P18239 318 aaKnown RBP1.33□□□□□ -2.2
SFB2YNL049C NUP2P32499 720 aa1.33□□□□□ -2.2
SFB2YNL049C PDC2P32896 925 aa1.33□□□□□ -2.2
SFB2YNL049C YUH1P35127 236 aa1.33□□□□□ -2.2
SFB2YNL049C YHR180WP38868 163 aa1.33□□□□□ -2.2
SFB2YNL049C MIG3P39943 394 aa1.33□□□□□ -2.2
SFB2YNL049C OXA1P39952 402 aa1.33□□□□□ -2.2
SFB2YNL049C SPO73P40031 143 aa1.33□□□□□ -2.2
SFB2YNL049C YNL320WP42840 284 aa1.33□□□□□ -2.2
SFB2YNL049C STB1P42845 420 aa1.33□□□□□ -2.2
SFB2YNL049C YGR201CP42936 225 aa1.33□□□□□ -2.2
SFB2YNL049C YGR210CP42942 411 aa1.33□□□□□ -2.2
SFB2YNL049C YPI1P43587 155 aa1.33□□□□□ -2.2
SFB2YNL049C LIA1P47120 325 aaKnown RBP1.33□□□□□ -2.2
SFB2YNL049C COX20Q04935 205 aa1.33□□□□□ -2.2
SFB2YNL049C FIT3Q08907 204 aa1.33□□□□□ -2.2
SFB2YNL049C UIP4Q08926 304 aa1.33□□□□□ -2.2
SFB2YNL049C SLF1Q12034 447 aaKnown RBP1.33□□□□□ -2.2
SFB2YNL049C NSL1Q12143 216 aa1.33□□□□□ -2.2
SFB2YNL049C JLP1Q12358 412 aa1.33□□□□□ -2.2
SFB2YNL049C BBP1Q12365 385 aa1.33□□□□□ -2.2
SFB2YNL049C SGA1P08019 549 aa1.33□□□□□ -2.2
SFB2YNL049C MRPS28P21771 286 aa1.33□□□□□ -2.2
SFB2YNL049C RPC19P28000 142 aaKnown RBP1.33□□□□□ -2.2
SFB2YNL049C AUA1P32450 94 aa1.33□□□□□ -2.2
SFB2YNL049C ZRT1P32804 376 aa1.33□□□□□ -2.2
SFB2YNL049C CPR5P35176 225 aa1.33□□□□□ -2.2
SFB2YNL049C PRS4P38063 326 aaPredicted RBP1.33□□□□□ -2.2
SFB2YNL049C MPC2P38857 129 aa1.33□□□□□ -2.2
SFB2YNL049C YFL012WP43580 148 aa1.33□□□□□ -2.2
SFB2YNL049C RSM27P53305 110 aa1.33□□□□□ -2.2
SFB2YNL049C GIS2P53849 153 aaKnown RBP RIP-Chip data1.33□□□□□ -2.2not detected
SFB2YNL049C YKR005CQ02203 525 aa1.33□□□□□ -2.2
SFB2YNL049C YMR010WQ03687 405 aa1.33□□□□□ -2.2
SFB2YNL049C YMR114CQ04471 368 aaKnown RBP1.33□□□□□ -2.2
SFB2YNL049C APC9Q12107 265 aa1.33□□□□□ -2.2
SFB2YNL049C GIT1P25346 518 aa1.32□□□□□ -2.2
SFB2YNL049C LSM12P38828 187 aaKnown RBP1.32□□□□□ -2.2
SFB2YNL049C PEX22P39718 180 aa1.32□□□□□ -2.2
SFB2YNL049C PFS2P42841 465 aaKnown RBP1.32□□□□□ -2.2
SFB2YNL049C COX16P47081 118 aa1.32□□□□□ -2.2
SFB2YNL049C NUP57P48837 541 aa1.32□□□□□ -2.2
SFB2YNL049C CDH1P53197 566 aa1.32□□□□□ -2.2
SFB2YNL049C HCH1P53834 153 aa1.32□□□□□ -2.2
SFB2YNL049C YMR209CQ03648 457 aa1.32□□□□□ -2.2
SFB2YNL049C FSH2Q05015 223 aa1.32□□□□□ -2.2
SFB2YNL049C PEX10Q05568 337 aa1.32□□□□□ -2.2
SFB2YNL049C BCP1Q06338 283 aa1.32□□□□□ -2.2
SFB2YNL049C YHR214C-EQ8TGK0 99 aa1.32□□□□□ -2.2
SFB2YNL049C YCR101CP25607 182 aa1.32□□□□□ -2.2
SFB2YNL049C HSP30P25619 332 aa1.32□□□□□ -2.2
SFB2YNL049C TIM12P32830 109 aa1.32□□□□□ -2.2
SFB2YNL049C TMA19P35691 167 aaKnown RBP1.32□□□□□ -2.2
SFB2YNL049C CHL4P38907 458 aa1.32□□□□□ -2.2
SFB2YNL049C PEP8P40335 379 aa1.32□□□□□ -2.2
SFB2YNL049C MIG2P53035 382 aa1.32□□□□□ -2.2
SFB2YNL049C MPC1P53157 130 aaKnown RBP1.32□□□□□ -2.2
SFB2YNL049C YDR278CQ05612 105 aa1.32□□□□□ -2.2
SFB2YNL049C UPS1Q05776 175 aa1.32□□□□□ -2.2
SFB2YNL049C YLR283WQ05867 314 aa1.32□□□□□ -2.2
SFB2YNL049C YET3Q07451 203 aa1.32□□□□□ -2.2
SFB2YNL049C RBD2Q12270 262 aa1.32□□□□□ -2.2
SFB2YNL049C HMS1Q12398 434 aa1.32□□□□□ -2.2
SFB2YNL049C OCH1P31755 480 aa1.31□□□□□ -2.2
SFB2YNL049C RIB1P38066 345 aa1.31□□□□□ -2.2
SFB2YNL049C FMP23P38231 175 aa1.31□□□□□ -2.2
SFB2YNL049C YPC1P38298 316 aa1.31□□□□□ -2.2
SFB2YNL049C PET8P38921 284 aa1.31□□□□□ -2.2
SFB2YNL049C AGP3P43548 558 aa1.31□□□□□ -2.2
SFB2YNL049C UBC13P52490 153 aa1.31□□□□□ -2.2
SFB2YNL049C AIM36Q03798 255 aa1.31□□□□□ -2.2
SFB2YNL049C PEX12Q04370 399 aa1.31□□□□□ -2.2
SFB2YNL049C LIP2Q06005 328 aa1.31□□□□□ -2.2
SFB2YNL049C CDC28P00546 298 aaKnown RBP1.31□□□□□ -2.2
SFB2YNL049C CDC8P00572 216 aa1.31□□□□□ -2.2
SFB2YNL049C ATP6P00854 259 aa1.31□□□□□ -2.2
SFB2YNL049C RAS2P01120 322 aaKnown RBP1.31□□□□□ -2.2
SFB2YNL049C RPL31AP0C2H8 113 aaKnown RBP1.31□□□□□ -2.2
SFB2YNL049C RPL30P14120 105 aaKnown RBP1.31□□□□□ -2.2
SFB2YNL049C CBF1P17106 351 aa1.31□□□□□ -2.2
SFB2YNL049C CDC50P25656 391 aa1.31□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 39.5 ms