RNA–Protein interactions for RNA: YMR065W

KAR5, Transcript of Protein required for nuclear membrane fusion during karyogamy, yeast

Gene KAR5, Length 1,515 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KAR5	YMR065W	DOG1	P38774	246 aa		2.32	□□□□□ -2.04
KAR5	YMR065W	CTR2	P38865	189 aa		2.32	□□□□□ -2.04
KAR5	YMR065W	FMC1	P40491	155 aa		2.32	□□□□□ -2.04
KAR5	YMR065W	SRL4	Q03085	281 aa		2.32	□□□□□ -2.04
KAR5	YMR065W	SIR4	P11978	1358 aa		2.31	□□□□□ -2.04
KAR5	YMR065W	RPL9A	P05738	191 aa	Known RBP	2.31	□□□□□ -2.04
KAR5	YMR065W	ERD2	P18414	219 aa		2.31	□□□□□ -2.04
KAR5	YMR065W	PEX4	P29340	183 aa		2.31	□□□□□ -2.04
KAR5	YMR065W	YPT52	P36018	234 aa	Known RBP	2.31	□□□□□ -2.04
KAR5	YMR065W	CIS3	P47001	227 aa		2.31	□□□□□ -2.04
KAR5	YMR065W	HAM1	P47119	197 aa	Known RBP	2.31	□□□□□ -2.04
KAR5	YMR065W	RPL9B	P51401	191 aa	Known RBP	2.31	□□□□□ -2.04
KAR5	YMR065W	YGR219W	P53307	113 aa		2.31	□□□□□ -2.04
KAR5	YMR065W	YOR020W-A	Q3E824	90 aa		2.31	□□□□□ -2.04
KAR5	YMR065W	HKR1	P41809	1802 aa		2.31	□□□□□ -2.04
KAR5	YMR065W	TAO3	P40468	2376 aa		2.31	□□□□□ -2.04
KAR5	YMR065W	GSC2	P40989	1895 aa		2.3	□□□□□ -2.04
KAR5	YMR065W	SRB4	P32569	687 aa		2.3	□□□□□ -2.04
KAR5	YMR065W	YFR054C	P43622	192 aa		2.3	□□□□□ -2.04
KAR5	YMR065W	MRPS8	Q03799	155 aa		2.3	□□□□□ -2.04
KAR5	YMR065W	SNA3	P14359	133 aa		2.29	□□□□□ -2.04
KAR5	YMR065W	MRPL25	P23369	157 aa		2.29	□□□□□ -2.04
KAR5	YMR065W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	2.29	□□□□□ -2.04	not detected
KAR5	YMR065W	CUE1	P38428	203 aa		2.29	□□□□□ -2.04
KAR5	YMR065W	YAR068W	P39564	161 aa		2.29	□□□□□ -2.04
KAR5	YMR065W	AYR1	P40471	297 aa		2.29	□□□□□ -2.04
KAR5	YMR065W	CAT5	P41735	233 aa		2.29	□□□□□ -2.04
KAR5	YMR065W	PET117	Q02771	107 aa		2.29	□□□□□ -2.04
KAR5	YMR065W	MSA1	Q08471	629 aa		2.29	□□□□□ -2.04
KAR5	YMR065W	NIP7	Q08962	181 aa	Known RBP	2.29	□□□□□ -2.04
KAR5	YMR065W	IKI3	Q06706	1349 aa	Known RBP	2.28	□□□□□ -2.04
KAR5	YMR065W	RPS24A	P0CX31	135 aa	Known RBP	2.28	□□□□□ -2.04
KAR5	YMR065W	RPS24B	P0CX32	135 aa	Known RBP	2.28	□□□□□ -2.04
KAR5	YMR065W	FCY2	P17064	533 aa		2.28	□□□□□ -2.04
KAR5	YMR065W	SCL1	P21243	252 aa	Known RBP	2.28	□□□□□ -2.04
KAR5	YMR065W	RPS5	P26783	225 aa	Known RBP	2.28	□□□□□ -2.04
KAR5	YMR065W	RPF1	P38805	295 aa	Known RBP	2.28	□□□□□ -2.04
KAR5	YMR065W	LSM4	P40070	187 aa	Known RBP	2.28	□□□□□ -2.04
KAR5	YMR065W	YJR056C	P47115	236 aa		2.28	□□□□□ -2.04
KAR5	YMR065W	NUP84	P52891	726 aa		2.28	□□□□□ -2.04
KAR5	YMR065W	SSQ1	Q05931	657 aa	Predicted RBP	2.28	□□□□□ -2.04
KAR5	YMR065W	MSW1	P04803	379 aa		2.27	□□□□□ -2.05
KAR5	YMR065W	YCR016W	P25617	290 aa	Known RBP	2.27	□□□□□ -2.05
KAR5	YMR065W	LDB7	P38210	180 aa		2.27	□□□□□ -2.05
KAR5	YMR065W	YIL001W	P40560	513 aa		2.27	□□□□□ -2.05
KAR5	YMR065W	PHO88	P38264	188 aa	Predicted RBP	2.27	□□□□□ -2.05
KAR5	YMR065W	ERG25	P53045	309 aa		2.27	□□□□□ -2.05
KAR5	YMR065W	YML096W	Q04489	525 aa		2.27	□□□□□ -2.05
KAR5	YMR065W	TOR2	P32600	2474 aa	Known RBP	2.26	□□□□□ -2.05
KAR5	YMR065W	BEM2	P39960	2167 aa	Known RBP	2.26	□□□□□ -2.05
KAR5	YMR065W	OAC1	P32332	324 aa		2.26	□□□□□ -2.05
KAR5	YMR065W	RIB1	P38066	345 aa		2.26	□□□□□ -2.05
KAR5	YMR065W	ERV15	P38312	142 aa		2.26	□□□□□ -2.05
KAR5	YMR065W	PEP8	P40335	379 aa		2.26	□□□□□ -2.05
KAR5	YMR065W	RPA43	P46669	326 aa		2.26	□□□□□ -2.05
KAR5	YMR065W	ABF2	Q02486	183 aa		2.26	□□□□□ -2.05
KAR5	YMR065W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	2.26	□□□□□ -2.05	not detected
KAR5	YMR065W	RAS2	P01120	322 aa	Known RBP	2.25	□□□□□ -2.05
KAR5	YMR065W	GRX2	P17695	143 aa	Known RBP	2.25	□□□□□ -2.05
KAR5	YMR065W	YBR063C	P38083	404 aa		2.25	□□□□□ -2.05
KAR5	YMR065W	MCM22	P47167	239 aa		2.25	□□□□□ -2.05
KAR5	YMR065W	YLR283W	Q05867	314 aa		2.25	□□□□□ -2.05
KAR5	YMR065W	NEJ1	Q06148	342 aa		2.25	□□□□□ -2.05
KAR5	YMR065W	YKE4	P40544	346 aa		2.24	□□□□□ -2.05
KAR5	YMR065W	ARR2	Q06597	130 aa		2.24	□□□□□ -2.05
KAR5	YMR065W	HEM25	Q07534	307 aa		2.24	□□□□□ -2.05
KAR5	YMR065W	YPL229W	Q99395	206 aa		2.24	□□□□□ -2.05
KAR5	YMR065W	MLP1	Q02455	1875 aa	Known RBP	2.24	□□□□□ -2.05
KAR5	YMR065W	ECM33	P38248	429 aa	Known RBP	2.23	□□□□□ -2.05
KAR5	YMR065W	VTC1	P40046	129 aa	RIP-Chip data	2.23	□□□□□ -2.05	not detected
KAR5	YMR065W	TRM9	P49957	279 aa		2.23	□□□□□ -2.05
KAR5	YMR065W	CYT2	Q00873	224 aa		2.23	□□□□□ -2.05
KAR5	YMR065W	YML108W	Q03759	105 aa		2.23	□□□□□ -2.05
KAR5	YMR065W	RPO26	P20435	155 aa		2.22	□□□□□ -2.05
KAR5	YMR065W	MSN4	P33749	630 aa		2.22	□□□□□ -2.05
KAR5	YMR065W	YHR022C	P38763	256 aa		2.22	□□□□□ -2.05
KAR5	YMR065W	BMT5	P40493	336 aa		2.22	□□□□□ -2.05
KAR5	YMR065W	PRM10	P42946	383 aa		2.22	□□□□□ -2.05
KAR5	YMR065W	LIA1	P47120	325 aa	Known RBP	2.22	□□□□□ -2.05
KAR5	YMR065W	YJR149W	P47177	404 aa		2.22	□□□□□ -2.05
KAR5	YMR065W	NSA1	P53136	463 aa	Predicted RBP	2.22	□□□□□ -2.05
KAR5	YMR065W	YMD8	Q03697	442 aa		2.22	□□□□□ -2.05
KAR5	YMR065W	TEL1	P38110	2787 aa		2.22	□□□□□ -2.05
KAR5	YMR065W	CDC10	P25342	322 aa	Known RBP	2.22	□□□□□ -2.05
KAR5	YMR065W	RSM25	P40496	264 aa		2.22	□□□□□ -2.05
KAR5	YMR065W	ERV29	P53337	310 aa		2.22	□□□□□ -2.05
KAR5	YMR065W	USB1	Q12208	290 aa	Known RBP	2.22	□□□□□ -2.05
KAR5	YMR065W	TPO4	Q12256	659 aa		2.22	□□□□□ -2.05
KAR5	YMR065W	LYS2	P07702	1392 aa		2.21	□□□□□ -2.06
KAR5	YMR065W	CDC7	P06243	507 aa		2.21	□□□□□ -2.06
KAR5	YMR065W	MATALPHA1	P0CY06	175 aa		2.21	□□□□□ -2.06
KAR5	YMR065W	HMLALPHA1	P0CY07	175 aa		2.21	□□□□□ -2.06
KAR5	YMR065W	VPS21	P36017	210 aa	Known RBP	2.21	□□□□□ -2.06
KAR5	YMR065W	DSE2	P38844	325 aa		2.21	□□□□□ -2.06
KAR5	YMR065W	BCY1	P07278	416 aa	Known RBP	2.2	□□□□□ -2.06
KAR5	YMR065W	MDH2	P22133	377 aa		2.2	□□□□□ -2.06
KAR5	YMR065W	NTF2	P33331	125 aa	Known RBP	2.2	□□□□□ -2.06
KAR5	YMR065W	YHR180W	P38868	163 aa		2.2	□□□□□ -2.06
KAR5	YMR065W	PEX17	P40155	199 aa		2.2	□□□□□ -2.06
KAR5	YMR065W	YHR139C-A	O13536	103 aa		2.19	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 65.3 ms