RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W IRC22P40006 225 aa2.36□□□□□ -2.03
SPO20YMR017W PRM10P42946 383 aa2.36□□□□□ -2.03
SPO20YMR017W FYV6P53913 173 aa2.36□□□□□ -2.03
SPO20YMR017W DID2P69771 204 aa2.36□□□□□ -2.03
SPO20YMR017W TRM12Q04235 462 aa2.36□□□□□ -2.03
SPO20YMR017W SEY1Q99287 776 aa2.36□□□□□ -2.03
SPO20YMR017W SCC2Q04002 1493 aa2.36□□□□□ -2.03
SPO20YMR017W DOG2P38773 246 aa2.35□□□□□ -2.03
SPO20YMR017W RTC3P38804 111 aaPredicted RBP2.35□□□□□ -2.03
SPO20YMR017W ALG13P53178 202 aa2.35□□□□□ -2.03
SPO20YMR017W YNL010WP53981 241 aaKnown RBP2.35□□□□□ -2.03
SPO20YMR017W LPP1Q04396 274 aa2.35□□□□□ -2.03
SPO20YMR017W PSF1Q12488 208 aa2.35□□□□□ -2.03
SPO20YMR017W POL1P13382 1468 aa2.34□□□□□ -2.03
SPO20YMR017W TY1B-JR2P47100 1755 aaKnown RBP2.34□□□□□ -2.03
SPO20YMR017W TY1B-ER2Q03619 1755 aa2.34□□□□□ -2.03
SPO20YMR017W TY1B-MR1Q04214 1755 aa2.34□□□□□ -2.03
SPO20YMR017W TY1B-MR2Q04670 1755 aaKnown RBP2.34□□□□□ -2.03
SPO20YMR017W TY1B-LR1Q12088 1755 aaKnown RBP2.34□□□□□ -2.03
SPO20YMR017W TY1B-NL1Q12112 1755 aa2.34□□□□□ -2.03
SPO20YMR017W TY1B-GR1Q12141 1755 aa2.34□□□□□ -2.03
SPO20YMR017W TY1B-BLQ12490 1755 aa2.34□□□□□ -2.03
SPO20YMR017W STU1P38198 1513 aa2.34□□□□□ -2.03
SPO20YMR017W YCF1P39109 1515 aaKnown RBP2.34□□□□□ -2.03
SPO20YMR017W CDC28P00546 298 aaKnown RBP2.34□□□□□ -2.03
SPO20YMR017W TCD1P38756 429 aa2.34□□□□□ -2.03
SPO20YMR017W BRR6P53062 197 aa2.34□□□□□ -2.03
SPO20YMR017W UFD4P33202 1483 aa2.33□□□□□ -2.04
SPO20YMR017W CDC25P04821 1589 aa2.33□□□□□ -2.04
SPO20YMR017W DDI2P0CH63 225 aa2.33□□□□□ -2.04
SPO20YMR017W DDI3P0CH64 225 aa2.33□□□□□ -2.04
SPO20YMR017W NHP6BP11633 99 aaKnown RBP2.33□□□□□ -2.04
SPO20YMR017W SPG3Q04398 127 aaPredicted RBP2.33□□□□□ -2.04
SPO20YMR017W DCN1Q12395 269 aa2.33□□□□□ -2.04
SPO20YMR017W YKL183C-AQ3E765 70 aa2.33□□□□□ -2.04
SPO20YMR017W NTE1Q04958 1679 aa2.33□□□□□ -2.04
SPO20YMR017W RPO31P04051 1460 aa2.33□□□□□ -2.04
SPO20YMR017W RPA190P10964 1664 aaKnown RBP2.32□□□□□ -2.04
SPO20YMR017W RPL28P02406 149 aaKnown RBP2.32□□□□□ -2.04
SPO20YMR017W PET9P18239 318 aaKnown RBP2.32□□□□□ -2.04
SPO20YMR017W DBF2P22204 572 aa2.32□□□□□ -2.04
SPO20YMR017W ATG22P25568 528 aa2.32□□□□□ -2.04
SPO20YMR017W MEI4P29467 408 aa2.32□□□□□ -2.04
SPO20YMR017W DSE2P38844 325 aa2.32□□□□□ -2.04
SPO20YMR017W VTC1P40046 129 aaRIP-Chip data2.32□□□□□ -2.04not detected
SPO20YMR017W RPL33BP41056 107 aaKnown RBP2.32□□□□□ -2.04
SPO20YMR017W YRB1P41920 201 aaKnown RBP2.32□□□□□ -2.04
SPO20YMR017W AIF1P52923 378 aa2.32□□□□□ -2.04
SPO20YMR017W PRM8P53174 237 aa2.32□□□□□ -2.04
SPO20YMR017W YNR062CP53748 327 aa2.32□□□□□ -2.04
SPO20YMR017W YDR248CQ03786 193 aa2.32□□□□□ -2.04
SPO20YMR017W RUD3Q12234 484 aaKnown RBP2.32□□□□□ -2.04
SPO20YMR017W YOR1P53049 1477 aa2.32□□□□□ -2.04
SPO20YMR017W RPO21P04050 1733 aaKnown RBP2.31□□□□□ -2.04
SPO20YMR017W REP2P03872 296 aa2.31□□□□□ -2.04
SPO20YMR017W CDC7P06243 507 aa2.31□□□□□ -2.04
SPO20YMR017W YBR121C-AP0C5L4 52 aa2.31□□□□□ -2.04
SPO20YMR017W PBN1P25580 416 aa2.31□□□□□ -2.04
SPO20YMR017W ERG28P40030 148 aa2.31□□□□□ -2.04
SPO20YMR017W PGD1P40356 397 aa2.31□□□□□ -2.04
SPO20YMR017W MSS2P40990 351 aa2.31□□□□□ -2.04
SPO20YMR017W BXI1P48558 297 aa2.31□□□□□ -2.04
SPO20YMR017W NUP57P48837 541 aa2.31□□□□□ -2.04
SPO20YMR017W TOP2P06786 1428 aaKnown RBP2.31□□□□□ -2.04
SPO20YMR017W MDH2P22133 377 aa2.3□□□□□ -2.04
SPO20YMR017W APS1P35181 156 aa2.3□□□□□ -2.04
SPO20YMR017W POP4P38336 279 aa2.3□□□□□ -2.04
SPO20YMR017W AGE2P40529 298 aa2.3□□□□□ -2.04
SPO20YMR017W RNH1Q04740 348 aa2.3□□□□□ -2.04
SPO20YMR017W SMC4Q12267 1418 aa2.3□□□□□ -2.04
SPO20YMR017W MYO4P32492 1471 aa2.3□□□□□ -2.04
SPO20YMR017W CHD1P32657 1468 aa2.3□□□□□ -2.04
SPO20YMR017W BEM2P39960 2167 aaKnown RBP2.3□□□□□ -2.04
SPO20YMR017W MMS22Q06164 1454 aa2.29□□□□□ -2.04
SPO20YMR017W CBT1P36038 271 aaPredicted RBP2.29□□□□□ -2.04
SPO20YMR017W SVP26P38869 228 aa2.29□□□□□ -2.04
SPO20YMR017W YNL194CP40169 301 aa2.29□□□□□ -2.04
SPO20YMR017W ICE2P40499 491 aa2.29□□□□□ -2.04
SPO20YMR017W GCN20P43535 752 aaKnown RBP2.29□□□□□ -2.04
SPO20YMR017W FAR7P43592 221 aa2.29□□□□□ -2.04
SPO20YMR017W ADO1P47143 340 aaKnown RBP2.29□□□□□ -2.04
SPO20YMR017W SNZ1Q03148 297 aa2.29□□□□□ -2.04
SPO20YMR017W ULS1Q08562 1619 aa2.28□□□□□ -2.04
SPO20YMR017W YLR156WP0CE96 114 aa2.28□□□□□ -2.04
SPO20YMR017W YLR159WP0CE97 114 aa2.28□□□□□ -2.04
SPO20YMR017W YLR161WP0CE98 114 aa2.28□□□□□ -2.04
SPO20YMR017W COQ1P18900 473 aa2.28□□□□□ -2.04
SPO20YMR017W MGA1P53050 456 aa2.28□□□□□ -2.04
SPO20YMR017W JLP1Q12358 412 aa2.28□□□□□ -2.04
SPO20YMR017W TDA8Q6B2U8 126 aa2.28□□□□□ -2.04
SPO20YMR017W YRF1-1P0CX20 1796 aa2.28□□□□□ -2.04
SPO20YMR017W YRF1-5P0CX21 1796 aa2.28□□□□□ -2.04
SPO20YMR017W YRF1-8P0CX22 1796 aa2.28□□□□□ -2.04
SPO20YMR017W YBT1P32386 1661 aa2.28□□□□□ -2.05
SPO20YMR017W SNQ2P32568 1501 aaKnown RBP2.27□□□□□ -2.05
SPO20YMR017W VTH1P40438 1549 aa2.27□□□□□ -2.05
SPO20YMR017W VTH2P40890 1549 aa2.27□□□□□ -2.05
SPO20YMR017W PDR15Q04182 1529 aaKnown RBP2.27□□□□□ -2.05
SPO20YMR017W ARG80P07249 177 aa2.27□□□□□ -2.05
SPO20YMR017W STE18P18852 110 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 35 ms