RNA–Protein interactions for RNA: YKL195W

MIA40, Transcript of Mitochondrial oxidoreductase, yeast

Gene MIA40, Length 1,212 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MIA40	YKL195W	RPA34	P47006	233 aa	Predicted RBP	5.63	□□□□□ -1.51
MIA40	YKL195W	MCM22	P47167	239 aa		5.63	□□□□□ -1.51
MIA40	YKL195W	ODC1	Q03028	310 aa		5.63	□□□□□ -1.51
MIA40	YKL195W	RSM10	Q03201	203 aa		5.63	□□□□□ -1.51
MIA40	YKL195W	RCE1	Q03530	315 aa		5.63	□□□□□ -1.51
MIA40	YKL195W	CAC2	Q04199	468 aa		5.63	□□□□□ -1.51
MIA40	YKL195W	ERP1	Q05359	219 aa	Known RBP	5.63	□□□□□ -1.51
MIA40	YKL195W	YLR365W	Q7LIF2	110 aa		5.63	□□□□□ -1.51
MIA40	YKL195W	RPL7A	P05737	244 aa	Known RBP	5.62	□□□□□ -1.51
MIA40	YKL195W	SAG1	P20840	650 aa		5.62	□□□□□ -1.51
MIA40	YKL195W	SWD2	P36104	329 aa	Predicted RBP	5.62	□□□□□ -1.51
MIA40	YKL195W	ERV15	P38312	142 aa		5.62	□□□□□ -1.51
MIA40	YKL195W	YEA6	P39953	335 aa		5.62	□□□□□ -1.51
MIA40	YKL195W	YIL029C	P40538	142 aa		5.62	□□□□□ -1.51
MIA40	YKL195W	SOL1	P50278	321 aa		5.62	□□□□□ -1.51
MIA40	YKL195W	YDR415C	Q04033	374 aa	Predicted RBP	5.62	□□□□□ -1.51
MIA40	YKL195W	TSA2	Q04120	196 aa		5.62	□□□□□ -1.51
MIA40	YKL195W	YDR286C	Q05530	114 aa		5.62	□□□□□ -1.51
MIA40	YKL195W	RAF1	Q06891	181 aa		5.62	□□□□□ -1.51
MIA40	YKL195W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.62	□□□□□ -1.51	not detected
MIA40	YKL195W	RPL7B	Q12213	244 aa	Known RBP	5.62	□□□□□ -1.51
MIA40	YKL195W	ATG40	Q99325	256 aa		5.62	□□□□□ -1.51
MIA40	YKL195W	CNB1	P25296	175 aa		5.61	□□□□□ -1.51
MIA40	YKL195W	MSK1	P32048	576 aa		5.61	□□□□□ -1.51
MIA40	YKL195W	MNS1	P32906	549 aa		5.61	□□□□□ -1.51
MIA40	YKL195W	MRPS5	P33759	307 aa		5.61	□□□□□ -1.51
MIA40	YKL195W	RPB7	P34087	171 aa		5.61	□□□□□ -1.51
MIA40	YKL195W	ECM31	P38122	312 aa		5.61	□□□□□ -1.51
MIA40	YKL195W	YBR184W	P38299	523 aa		5.61	□□□□□ -1.51
MIA40	YKL195W	SHG1	P38337	142 aa		5.61	□□□□□ -1.51
MIA40	YKL195W	PRS2	P38620	318 aa	Known RBP	5.61	□□□□□ -1.51
MIA40	YKL195W	MTC6	P38849	526 aa		5.61	□□□□□ -1.51
MIA40	YKL195W	POP2	P39008	433 aa		5.61	□□□□□ -1.51
MIA40	YKL195W	PAC2	P39937	518 aa		5.61	□□□□□ -1.51
MIA40	YKL195W	CCS1	P40202	249 aa	Known RBP	5.61	□□□□□ -1.51
MIA40	YKL195W	FLX1	P40464	311 aa		5.61	□□□□□ -1.51
MIA40	YKL195W	SLM1	P40485	686 aa		5.61	□□□□□ -1.51
MIA40	YKL195W	HAM1	P47119	197 aa	Known RBP	5.61	□□□□□ -1.51
MIA40	YKL195W	FMP41	P53889	259 aa	Known RBP	5.61	□□□□□ -1.51
MIA40	YKL195W	YCL001W-A	P87012	153 aa		5.61	□□□□□ -1.51
MIA40	YKL195W	EST3	Q03096	181 aa		5.61	□□□□□ -1.51
MIA40	YKL195W	YMR254C	Q04838	102 aa		5.61	□□□□□ -1.51
MIA40	YKL195W	YPR098C	Q06089	161 aa		5.61	□□□□□ -1.51
MIA40	YKL195W	PIN3	Q06449	215 aa		5.61	□□□□□ -1.51
MIA40	YKL195W	YOL029C	Q08187	201 aa		5.61	□□□□□ -1.51
MIA40	YKL195W	NCE102	Q12207	173 aa	RIP-Chip data	5.61	□□□□□ -1.51	not detected
MIA40	YKL195W	GDH1	P07262	454 aa	Known RBP	5.6	□□□□□ -1.51
MIA40	YKL195W	RIP1	P08067	215 aa		5.6	□□□□□ -1.51
MIA40	YKL195W	YUH1	P35127	236 aa		5.6	□□□□□ -1.51
MIA40	YKL195W	SWD3	P38123	315 aa		5.6	□□□□□ -1.51
MIA40	YKL195W	MOH1	P38191	138 aa		5.6	□□□□□ -1.51
MIA40	YKL195W	GPI16	P38875	610 aa		5.6	□□□□□ -1.51
MIA40	YKL195W	PHB1	P40961	287 aa		5.6	□□□□□ -1.51
MIA40	YKL195W	MRX5	P47007	382 aa		5.6	□□□□□ -1.51
MIA40	YKL195W	YJR012C	P47087	207 aa		5.6	□□□□□ -1.51
MIA40	YKL195W	YPL077C	Q02831	240 aa		5.6	□□□□□ -1.51
MIA40	YKL195W	YDR391C	Q04170	232 aa		5.6	□□□□□ -1.51
MIA40	YKL195W	RRS1	Q08746	203 aa	Known RBP	5.6	□□□□□ -1.51
MIA40	YKL195W	FIT3	Q08907	204 aa		5.6	□□□□□ -1.51
MIA40	YKL195W	FRE8	Q12209	686 aa		5.6	□□□□□ -1.51
MIA40	YKL195W	VMA9	Q3E7B6	73 aa		5.6	□□□□□ -1.51
MIA40	YKL195W	PCC1	Q3E833	88 aa		5.6	□□□□□ -1.51
MIA40	YKL195W	HBN1	Q96VH4	193 aa		5.6	□□□□□ -1.51
MIA40	YKL195W	TOR2	P32600	2474 aa	Known RBP	5.6	□□□□□ -1.51
MIA40	YKL195W	MRP2	P10663	115 aa	Predicted RBP	5.59	□□□□□ -1.51
MIA40	YKL195W	ERG2	P32352	222 aa		5.59	□□□□□ -1.51
MIA40	YKL195W	NTC20	P38302	140 aa	Predicted RBP	5.59	□□□□□ -1.51
MIA40	YKL195W	YEL057C	P39983	233 aa		5.59	□□□□□ -1.51
MIA40	YKL195W	YEA4	P40004	342 aa		5.59	□□□□□ -1.51
MIA40	YKL195W	YER084W	P40057	128 aa		5.59	□□□□□ -1.51
MIA40	YKL195W	XBP1	P40489	647 aa		5.59	□□□□□ -1.51
MIA40	YKL195W	OST1	P41543	476 aa	Known RBP	5.59	□□□□□ -1.51
MIA40	YKL195W	YJR056C	P47115	236 aa		5.59	□□□□□ -1.51
MIA40	YKL195W	YIF1	P53845	314 aa	Known RBP	5.59	□□□□□ -1.51
MIA40	YKL195W	APJ1	P53940	528 aa		5.59	□□□□□ -1.51
MIA40	YKL195W	MRPS17	Q03246	237 aa	Predicted RBP	5.59	□□□□□ -1.51
MIA40	YKL195W	YDL086W	Q07505	273 aa		5.59	□□□□□ -1.51
MIA40	YKL195W	YFH1	Q07540	174 aa		5.59	□□□□□ -1.51
MIA40	YKL195W	PAM18	Q07914	168 aa		5.59	□□□□□ -1.51
MIA40	YKL195W	YOR352W	Q08816	343 aa		5.59	□□□□□ -1.51
MIA40	YKL195W	PRS5	Q12265	496 aa	Known RBP	5.59	□□□□□ -1.51
MIA40	YKL195W	YPR108W-A	Q3E7B3	70 aa		5.59	□□□□□ -1.51
MIA40	YKL195W	HUG1	Q6Q5K6	68 aa		5.59	□□□□□ -1.51
MIA40	YKL195W	ACC1	Q00955	2233 aa	Known RBP	5.59	□□□□□ -1.52
MIA40	YKL195W	MET3	P08536	511 aa		5.58	□□□□□ -1.52
MIA40	YKL195W	YML003W	P0CF16	290 aa		5.58	□□□□□ -1.52
MIA40	YKL195W	IMP1	P28627	190 aa		5.58	□□□□□ -1.52
MIA40	YKL195W	CLB6	P32943	380 aa		5.58	□□□□□ -1.52
MIA40	YKL195W	RIB5	P38145	238 aa		5.58	□□□□□ -1.52
MIA40	YKL195W	PIG2	P40187	538 aa		5.58	□□□□□ -1.52
MIA40	YKL195W	QRI1	P43123	477 aa	Known RBP	5.58	□□□□□ -1.52
MIA40	YKL195W	CAF16	P43569	289 aa		5.58	□□□□□ -1.52
MIA40	YKL195W	SKO1	Q02100	647 aa		5.58	□□□□□ -1.52
MIA40	YKL195W	YMR090W	Q04304	227 aa	Known RBP	5.58	□□□□□ -1.52
MIA40	YKL195W	FIT1	Q04433	528 aa		5.58	□□□□□ -1.52
MIA40	YKL195W	DPB4	Q04603	196 aa	Known RBP	5.58	□□□□□ -1.52
MIA40	YKL195W	YOL024W	Q08172	172 aa		5.58	□□□□□ -1.52
MIA40	YKL195W	ATP16	Q12165	160 aa		5.58	□□□□□ -1.52
MIA40	YKL195W	MPD1	Q12404	318 aa	Known RBP	5.58	□□□□□ -1.52
MIA40	YKL195W	AGC1	Q12482	902 aa		5.58	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 116.5 ms