RNA–Protein interactions for RNA: YKL146W

AVT3, Transcript of Vacuolar transporter, yeastyeast

Gene AVT3, Length 2,079 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT3YKL146W COS8P38723 381 aa4.39□□□□□ -1.71
AVT3YKL146W YGR210CP42942 411 aa4.39□□□□□ -1.71
AVT3YKL146W INN1P53901 409 aa4.39□□□□□ -1.71
AVT3YKL146W SMX3P54999 86 aaPredicted RBP4.39□□□□□ -1.71
AVT3YKL146W YMR254CQ04838 102 aa4.39□□□□□ -1.71
AVT3YKL146W SCP1Q08873 200 aa4.39□□□□□ -1.71
AVT3YKL146W MED4Q12343 284 aa4.39□□□□□ -1.71
AVT3YKL146W PUT1P09368 476 aa4.39□□□□□ -1.71
AVT3YKL146W SUA5P32579 426 aa4.39□□□□□ -1.71
AVT3YKL146W MEC1P38111 2368 aa4.39□□□□□ -1.71
AVT3YKL146W YMR144WP40214 342 aaKnown RBP4.39□□□□□ -1.71
AVT3YKL146W MRX5P47007 382 aa4.39□□□□□ -1.71
AVT3YKL146W YGR045CP53229 120 aa4.39□□□□□ -1.71
AVT3YKL146W CRZ1P53968 678 aa4.39□□□□□ -1.71
AVT3YKL146W PRM15Q03262 622 aa4.39□□□□□ -1.71
AVT3YKL146W CAB5Q03941 241 aa4.39□□□□□ -1.71
AVT3YKL146W API2Q04413 109 aa4.39□□□□□ -1.71
AVT3YKL146W RTT103Q05543 409 aa4.39□□□□□ -1.71
AVT3YKL146W YLR224WQ05947 369 aa4.39□□□□□ -1.71
AVT3YKL146W YNG1Q08465 219 aa4.39□□□□□ -1.71
AVT3YKL146W IMP1P28627 190 aa4.38□□□□□ -1.71
AVT3YKL146W OCH1P31755 480 aa4.38□□□□□ -1.71
AVT3YKL146W PRS2P38620 318 aaKnown RBP4.38□□□□□ -1.71
AVT3YKL146W LAG1P38703 411 aa4.38□□□□□ -1.71
AVT3YKL146W LNP1P38878 278 aa4.38□□□□□ -1.71
AVT3YKL146W CCS1P40202 249 aaKnown RBP4.38□□□□□ -1.71
AVT3YKL146W ECM27P47144 725 aa4.38□□□□□ -1.71
AVT3YKL146W TAF4P50105 388 aa4.38□□□□□ -1.71
AVT3YKL146W SLX9P53251 210 aaPredicted RBP4.38□□□□□ -1.71
AVT3YKL146W COA4Q05809 96 aa4.38□□□□□ -1.71
AVT3YKL146W FCY22Q12119 530 aa4.38□□□□□ -1.71
AVT3YKL146W VAM3Q12241 283 aa4.38□□□□□ -1.71
AVT3YKL146W MPD1Q12404 318 aaKnown RBP4.38□□□□□ -1.71
AVT3YKL146W ATG40Q99325 256 aa4.38□□□□□ -1.71
AVT3YKL146W RPS23AP0CX29 145 aaKnown RBP4.37□□□□□ -1.71
AVT3YKL146W RPS23BP0CX30 145 aa4.37□□□□□ -1.71
AVT3YKL146W SEN2P16658 377 aa4.37□□□□□ -1.71
AVT3YKL146W CKS1P20486 150 aaKnown RBP4.37□□□□□ -1.71
AVT3YKL146W MAG1P22134 296 aaKnown RBP4.37□□□□□ -1.71
AVT3YKL146W TRR1P29509 319 aaKnown RBP4.37□□□□□ -1.71
AVT3YKL146W GLY1P37303 387 aaKnown RBP4.37□□□□□ -1.71
AVT3YKL146W CDS1P38221 457 aa4.37□□□□□ -1.71
AVT3YKL146W PRS3P38689 320 aaKnown RBP4.37□□□□□ -1.71
AVT3YKL146W SWM2P40342 146 aa4.37□□□□□ -1.71
AVT3YKL146W UBP8P50102 471 aa4.37□□□□□ -1.71
AVT3YKL146W SOL1P50278 321 aa4.37□□□□□ -1.71
AVT3YKL146W NIF3P53081 288 aa4.37□□□□□ -1.71
AVT3YKL146W SKO1Q02100 647 aa4.37□□□□□ -1.71
AVT3YKL146W NRG1Q03125 231 aa4.37□□□□□ -1.71
AVT3YKL146W FEX2Q08991 375 aa4.37□□□□□ -1.71
AVT3YKL146W ALG6Q12001 544 aaKnown RBP4.37□□□□□ -1.71
AVT3YKL146W YLR365WQ7LIF2 110 aa4.37□□□□□ -1.71
AVT3YKL146W DFR1P07807 211 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
AVT3YKL146W CUP1-1P0CX80 61 aa4.37□□□□□ -1.71
AVT3YKL146W CUP1-2P0CX81 61 aa4.37□□□□□ -1.71
AVT3YKL146W MIR1P23641 311 aaKnown RBP4.37□□□□□ -1.71
AVT3YKL146W SWD3P38123 315 aa4.37□□□□□ -1.71
AVT3YKL146W YGP1P38616 354 aaKnown RBP4.37□□□□□ -1.71
AVT3YKL146W BMT5P40493 336 aa4.37□□□□□ -1.71
AVT3YKL146W YPL067CQ02754 198 aa4.37□□□□□ -1.71
AVT3YKL146W UPS1Q05776 175 aa4.37□□□□□ -1.71
AVT3YKL146W FEX1Q08913 375 aa4.37□□□□□ -1.71
AVT3YKL146W FRE8Q12209 686 aa4.37□□□□□ -1.71
AVT3YKL146W YJR112W-AQ3E743 109 aa4.37□□□□□ -1.71
AVT3YKL146W TDH1P00360 332 aaKnown RBP4.36□□□□□ -1.71
AVT3YKL146W YCR061WP25639 631 aa4.36□□□□□ -1.71
AVT3YKL146W RPB7P34087 171 aa4.36□□□□□ -1.71
AVT3YKL146W PHM8P40025 321 aa4.36□□□□□ -1.71
AVT3YKL146W SGN1P40561 250 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71not detected
AVT3YKL146W LOC1P43586 204 aaPredicted RBP4.36□□□□□ -1.71
AVT3YKL146W YMR279CQ03263 540 aa4.36□□□□□ -1.71
AVT3YKL146W THI74Q04083 370 aa4.36□□□□□ -1.71
AVT3YKL146W GAT3Q07928 141 aa4.36□□□□□ -1.71
AVT3YKL146W YGL194C-AQ2V2P6 80 aa4.36□□□□□ -1.71
AVT3YKL146W YBR298C-AQ8TGK4 73 aa4.36□□□□□ -1.71
AVT3YKL146W TPI1P00942 248 aaKnown RBP4.36□□□□□ -1.71
AVT3YKL146W YML003WP0CF16 290 aa4.36□□□□□ -1.71
AVT3YKL146W YOX1P34161 385 aa4.36□□□□□ -1.71
AVT3YKL146W SWD2P36104 329 aaPredicted RBP4.36□□□□□ -1.71
AVT3YKL146W YPC1P38298 316 aa4.36□□□□□ -1.71
AVT3YKL146W YIL077CP40508 320 aa4.36□□□□□ -1.71
AVT3YKL146W YIR035CP40579 254 aa4.36□□□□□ -1.71
AVT3YKL146W YDL183CP48569 320 aa4.36□□□□□ -1.71
AVT3YKL146W JAC1P53193 184 aa4.36□□□□□ -1.71
AVT3YKL146W ORM1P53224 222 aa4.36□□□□□ -1.71
AVT3YKL146W YNL092WP53934 400 aa4.36□□□□□ -1.71
AVT3YKL146W LIP2Q06005 328 aa4.36□□□□□ -1.71
AVT3YKL146W BBP1Q12365 385 aa4.36□□□□□ -1.71
AVT3YKL146W RTR2Q12378 196 aa4.36□□□□□ -1.71
AVT3YKL146W QCR2P07257 368 aa4.35□□□□□ -1.71
AVT3YKL146W SSA3P09435 649 aaKnown RBP4.35□□□□□ -1.71
AVT3YKL146W SPS100P13130 326 aa4.35□□□□□ -1.71
AVT3YKL146W FUS3P16892 353 aaKnown RBP4.35□□□□□ -1.71
AVT3YKL146W TIP1P27654 210 aaPredicted RBP4.35□□□□□ -1.71
AVT3YKL146W OSH7P38755 437 aa4.35□□□□□ -1.71
AVT3YKL146W PAC2P39937 518 aa4.35□□□□□ -1.71
AVT3YKL146W RMD6P39975 231 aa4.35□□□□□ -1.71
AVT3YKL146W AIR1P40507 360 aaKnown RBP4.35□□□□□ -1.71
AVT3YKL146W IRC24P40580 263 aa4.35□□□□□ -1.71
AVT3YKL146W GON7P46984 123 aa4.35□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms