RNA–Protein interactions for RNA: YHR052W

CIC1, Transcript of Essential protein that interacts with proteasome components, yeastyeast

Gene CIC1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIC1YHR052W PDR17P53844 350 aa1.16□□□□□ -2.22
CIC1YHR052W YLR460CP54007 376 aa1.16□□□□□ -2.22
CIC1YHR052W YPR147CQ06522 304 aaKnown RBP1.16□□□□□ -2.22
CIC1YHR052W COQ10Q08058 207 aa1.16□□□□□ -2.22
CIC1YHR052W YPL257WQ08974 193 aa1.16□□□□□ -2.22
CIC1YHR052W YLR053CQ12026 108 aa1.16□□□□□ -2.22
CIC1YHR052W NSL1Q12143 216 aa1.16□□□□□ -2.22
CIC1YHR052W YPL119C-AQ3E751 87 aa1.16□□□□□ -2.22
CIC1YHR052W RAD9P14737 1309 aa1.15□□□□□ -2.22
CIC1YHR052W TUS1Q06412 1307 aa1.15□□□□□ -2.22
CIC1YHR052W CMD1P06787 147 aaKnown RBP1.15□□□□□ -2.23
CIC1YHR052W YOL162WP0CF19 215 aa1.15□□□□□ -2.23
CIC1YHR052W RPC19P28000 142 aaKnown RBP1.15□□□□□ -2.23
CIC1YHR052W ACP1P32463 125 aa1.15□□□□□ -2.23
CIC1YHR052W NUF2P33895 451 aa1.15□□□□□ -2.23
CIC1YHR052W RCN1P36054 211 aa1.15□□□□□ -2.23
CIC1YHR052W MRPL28P36527 147 aa1.15□□□□□ -2.23
CIC1YHR052W FIG1P38224 298 aa1.15□□□□□ -2.23
CIC1YHR052W AME1P38313 324 aa1.15□□□□□ -2.23
CIC1YHR052W SSH1P38353 490 aaKnown RBP1.15□□□□□ -2.23
CIC1YHR052W HMF1P40037 129 aaKnown RBP1.15□□□□□ -2.23
CIC1YHR052W PDS1P40316 373 aaPredicted RBP1.15□□□□□ -2.23
CIC1YHR052W MOG1P47123 218 aa1.15□□□□□ -2.23
CIC1YHR052W XPT1P47165 209 aa1.15□□□□□ -2.23
CIC1YHR052W BXI1P48558 297 aa1.15□□□□□ -2.23
CIC1YHR052W YGL034CP53186 121 aa1.15□□□□□ -2.23
CIC1YHR052W YNL140CP53910 189 aa1.15□□□□□ -2.23
CIC1YHR052W NRK1P53915 240 aa1.15□□□□□ -2.23
CIC1YHR052W MAK3Q03503 176 aa1.15□□□□□ -2.23
CIC1YHR052W YDR248CQ03786 193 aa1.15□□□□□ -2.23
CIC1YHR052W MDM32Q12171 622 aa1.15□□□□□ -2.23
CIC1YHR052W YCL012CQ8J0M4 134 aa1.15□□□□□ -2.23
CIC1YHR052W YDR157WA0A023PZE8 133 aa1.14□□□□□ -2.23
CIC1YHR052W RPL25P04456 142 aaKnown RBP1.14□□□□□ -2.23
CIC1YHR052W YHR032W-AP0C5N6 59 aa1.14□□□□□ -2.23
CIC1YHR052W GCY1P14065 312 aaKnown RBP RIP-Chip data1.14□□□□□ -2.23not detected
CIC1YHR052W GCN3P14741 305 aa1.14□□□□□ -2.23
CIC1YHR052W MRPS28P21771 286 aa1.14□□□□□ -2.23
CIC1YHR052W SEC14P24280 304 aaKnown RBP1.14□□□□□ -2.23
CIC1YHR052W MEI4P29467 408 aa1.14□□□□□ -2.23
CIC1YHR052W TCA17P32613 152 aa1.14□□□□□ -2.23
CIC1YHR052W KDX1P36005 433 aa1.14□□□□□ -2.23
CIC1YHR052W ECM33P38248 429 aaKnown RBP1.14□□□□□ -2.23
CIC1YHR052W SRP14P38985 146 aa1.14□□□□□ -2.23
CIC1YHR052W YER189WP40104 122 aa1.14□□□□□ -2.23
CIC1YHR052W PEX17P40155 199 aa1.14□□□□□ -2.23
CIC1YHR052W ARC15P40518 154 aaRIP-Chip data1.14□□□□□ -2.23not detected
CIC1YHR052W CIS3P47001 227 aa1.14□□□□□ -2.23
CIC1YHR052W TRM9P49957 279 aa1.14□□□□□ -2.23
CIC1YHR052W LSM7P53905 115 aaKnown RBP1.14□□□□□ -2.23
CIC1YHR052W YNL046WP53956 172 aa1.14□□□□□ -2.23
CIC1YHR052W YNL010WP53981 241 aaKnown RBP1.14□□□□□ -2.23
CIC1YHR052W TMA20P89886 181 aaPredicted RBP1.14□□□□□ -2.23
CIC1YHR052W YMD8Q03697 442 aa1.14□□□□□ -2.23
CIC1YHR052W MRPS8Q03799 155 aa1.14□□□□□ -2.23
CIC1YHR052W SPC2Q04969 178 aa1.14□□□□□ -2.23
CIC1YHR052W GGA1Q06336 557 aa1.14□□□□□ -2.23
CIC1YHR052W YLR030WQ07967 263 aa1.14□□□□□ -2.23
CIC1YHR052W YLR031WQ07978 186 aa1.14□□□□□ -2.23
CIC1YHR052W YOR186WQ08560 144 aa1.14□□□□□ -2.23
CIC1YHR052W YLR126CQ12288 251 aa1.14□□□□□ -2.23
CIC1YHR052W ATP14Q12349 124 aa1.14□□□□□ -2.23
CIC1YHR052W BBP1Q12365 385 aa1.14□□□□□ -2.23
CIC1YHR052W EFG1Q3E705 233 aaKnown RBP1.14□□□□□ -2.23
CIC1YHR052W YBL008W-AQ3E821 79 aa1.14□□□□□ -2.23
CIC1YHR052W YOR020W-AQ3E824 90 aa1.14□□□□□ -2.23
CIC1YHR052W YLR462WO13556 202 aa1.13□□□□□ -2.23
CIC1YHR052W Q0255P03881 472 aa1.13□□□□□ -2.23
CIC1YHR052W GRX2P17695 143 aaKnown RBP1.13□□□□□ -2.23
CIC1YHR052W EHD3P28817 500 aa1.13□□□□□ -2.23
CIC1YHR052W YKR045CP36138 183 aa1.13□□□□□ -2.23
CIC1YHR052W TVP38P36164 337 aa1.13□□□□□ -2.23
CIC1YHR052W YBR096WP38256 230 aa1.13□□□□□ -2.23
CIC1YHR052W DOG2P38773 246 aa1.13□□□□□ -2.23
CIC1YHR052W CTR2P38865 189 aa1.13□□□□□ -2.23
CIC1YHR052W YEL075CP39972 122 aa1.13□□□□□ -2.23
CIC1YHR052W SKI6P46948 246 aaPredicted RBP1.13□□□□□ -2.23
CIC1YHR052W YGR042WP53227 271 aa1.13□□□□□ -2.23
CIC1YHR052W COG5P53951 403 aa1.13□□□□□ -2.23
CIC1YHR052W PKR1Q03880 122 aaKnown RBP1.13□□□□□ -2.23
CIC1YHR052W YML096WQ04489 525 aa1.13□□□□□ -2.23
CIC1YHR052W YMR315WQ04869 349 aaKnown RBP1.13□□□□□ -2.23
CIC1YHR052W DYN3Q04949 312 aa1.13□□□□□ -2.23
CIC1YHR052W NOC4Q06512 552 aaPredicted RBP1.13□□□□□ -2.23
CIC1YHR052W YPD1Q07688 167 aa1.13□□□□□ -2.23
CIC1YHR052W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.13□□□□□ -2.23not detected
CIC1YHR052W YOL024WQ08172 172 aa1.13□□□□□ -2.23
CIC1YHR052W BRX1Q08235 291 aaKnown RBP1.13□□□□□ -2.23
CIC1YHR052W AKR2Q12013 749 aa1.13□□□□□ -2.23
CIC1YHR052W RIO1Q12196 484 aaKnown RBP1.13□□□□□ -2.23
CIC1YHR052W YPR014CQ6B0W2 109 aa1.13□□□□□ -2.23
CIC1YHR052W HTL1Q9URQ5 78 aa1.13□□□□□ -2.23
CIC1YHR052W SIR4P11978 1358 aa1.12□□□□□ -2.23
CIC1YHR052W COX5AP00424 153 aa1.12□□□□□ -2.23
CIC1YHR052W MRS1P07266 363 aa1.12□□□□□ -2.23
CIC1YHR052W PBI2P0CT04 75 aaKnown RBP1.12□□□□□ -2.23
CIC1YHR052W CNB1P25296 175 aa1.12□□□□□ -2.23
CIC1YHR052W ARO7P32178 256 aa1.12□□□□□ -2.23
CIC1YHR052W CLG1P35190 452 aa1.12□□□□□ -2.23
CIC1YHR052W SRY1P36007 326 aa1.12□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms